KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 18:23:48 2014 Check: 00 .. Name: ENSP00000466799/1-328 Len: 328 Check: 6373 Weight: 1.00 Name: ENSBTAP00000054286/1-317 Len: 328 Check: 3668 Weight: 1.00 Name: ENSTTRP00000015554/1-318 Len: 328 Check: 3029 Weight: 1.00 Name: bmy_15660T0/1-314 Len: 328 Check: 4836 Weight: 1.00 Name: BACU007144/1-318 Len: 328 Check: 4995 Weight: 1.00 // 1 50 ENSP00000466799/1-328 MARTVVLITG CSSGIGLHLA VRLASDPSQS FKVYATLRDL KTQGRLWEAA ENSBTAP00000054286/1-317 MDRTVVLITG CSSGIGLHLA LRLASDPSQS FKVYATLRDL ASQGPLLEAA ENSTTRP00000015554/1-318 MDRTVVLITG CSSGIGLHLA LRLASDPSQG FKVYATLRDL MAQGPLWEAA bmy_15660T0/1-314 MDRTVVLITG CSSGIGLHLA LRLASDPSQS FKVYATLRDL TTQGPLWEAA BACU007144/1-318 MDRTVVLITG CSSGIGLHLA LRLASDPSQS FKVYATLRDL TTQGPLWEAA 51 100 ENSP00000466799/1-328 RALACPPGSL ETLQLDVRDS KSVAAARERV TEGRVDVLVC NAGLGLLGPL ENSBTAP00000054286/1-317 QSRGCLPGSL ETLQLDVRDA DSIAAAQARV TEGRVDVLVC NAGRGLVGPL ENSTTRP00000015554/1-318 RSRGCPPGSL EMLQLDVTDA DSIAAARARV TEGRVDVLVC NAGRGLVGPL bmy_15660T0/1-314 RSRGCPPGSL EMLQLDVRDA DSIAAARARV TEGRVDVL-- --GRGLVGPL BACU007144/1-318 RSRGCPPGSL EMLQLDVRDA DSIAAARARV TEGRVDVLVC NAGRGLVGPL 101 150 ENSP00000466799/1-328 EALGEDAVAS VLDVNVVGTV RMLQAFLPDM KRRGSGRVLV TGSVGGLMGL ENSBTAP00000054286/1-317 EAHKEGSVDA VLDVNLTGTV RMLQAFLPDM KRRRSGRILV TGSIGGLMAL ENSTTRP00000015554/1-318 EAHEEGAVGS VLDVNLTGTV RMLQAFLPDM KRRRSGRILV TGSVGGLMAL bmy_15660T0/1-314 EAHEEGTVGS VLDVNLTGTV RMLQAFLPDM KRRRSGRILV TGSMGGLMAL BACU007144/1-318 EAHEEGTVGS VLDVNLTGTV RMLQAFLPDM KRRRSGRILV TGSMGGLMAL 151 200 ENSP00000466799/1-328 PFNDVYCASK FALEGLCESL AVLLLPFGVH LSLIECGPVH TAFMEKVLGS ENSBTAP00000054286/1-317 PFNAVYCASK FALEGLCESL AILLQPFGVH VSLIECGPVH TPFPEKVEGG ENSTTRP00000015554/1-318 PFNAVYCASK FAIEGLCESL AILLQPFGVH LSLIECGPVH TAFPEKLEGG bmy_15660T0/1-314 PFNAVYCASK FAIEGLCESL AILLQPFGVH LSLIECGPVH TAFPEKLEGG BACU007144/1-318 PFNAVYCASK FAIEGLCESL AILLQPFGVH LSLIECGPVH TAFPEKLEGG 201 250 ENSP00000466799/1-328 PEEVLDRTDI HTFHRFYQYL AHSKQVFREA AQNPEEVAEV FLTALRAPKP ENSBTAP00000054286/1-317 LGGMLDRADV ETRDLFNRYR RHCERVIREA GQDPEEVVEV FLQALRAPRP ENSTTRP00000015554/1-318 LGGVLDRADA ETRDLFSRYL SHSEQIFLEA GQDPEDVTEV FLQALRAPRP bmy_15660T0/1-314 LGGMLDRADA ETRDLFSRYL SHSEQIFLEA GQDPEDVTEV FLQAMRAPRP BACU007144/1-318 LGGVLDRADA ETRDLFSRYL SHSEQIFFEA GQDPEDVTEV FLQALRPPRP 251 300 ENSP00000466799/1-328 TLRYFTTERF LPLLRMRLDD PSGSNYVTAM HREVFGDVPA KAEAGAEAGG ENSBTAP00000054286/1-317 ALRYFTTERF LPLVQLRFSD PSGSSYVAAA HKSAFHDKAA E--------G ENSTTRP00000015554/1-318 ALRYFTTERF LPLIQLRFSD PSGCSYVAAA HQAVFGDQAA E--------G bmy_15660T0/1-314 ALRYFTTERF LPLIQLRFSD PSGCSYVAAA HQAVFGDQAA E--------G BACU007144/1-318 ALRYFTTERF LPLIQLRFSD PSGCSYVAAA HQAVFGDQAA E--------G 301 350 ENSP00000466799/1-328 GAGPGAEDEA GRGAVGDPEL GDPPAAPQ ENSBTAP00000054286/1-317 SDGAGAETEA GK--LEASEL RAPL-APQ ENSTTRP00000015554/1-318 SDGAGAEAGA GE--PGAPEL GAPLAAPK bmy_15660T0/1-314 SDGAGAEAGA GE--LGAPEL GAPLAAPK BACU007144/1-318 SDGAGAEAGA GE--LGAPEL GAPLAAPK