KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 18:23:48 2014 Check: 00 .. Name: ENSBTAP00000054291/1-203 Len: 227 Check: 2975 Weight: 1.00 Name: ENSP00000264563/1-199 Len: 227 Check: 2678 Weight: 1.00 Name: BACU009044/1-199 Len: 227 Check: 154 Weight: 1.00 Name: bmy_16781T0/1-218 Len: 227 Check: 9277 Weight: 1.00 Name: ENSTTRP00000002277/1-199 Len: 227 Check: 9395 Weight: 1.00 // 1 50 ENSBTAP00000054291/1-203 --GVCCLVLA ALSLWPDRAA APGPPPAPPR ASPDPRAELD SAVLLTRSLL ENSP00000264563/1-199 MNCVCRLVLV VLSLWPDTAV APGPPPGPPR VSPDPRAELD STVLLTRSLL BACU009044/1-199 MNSVCCLVLV ALSLWPGRAV APGPPPGPPG ASPDPRAELD SAVLLTRSLL bmy_16781T0/1-218 ---VCCLVLV ALSLWPGRAA APGPPPGPPR ASPDPRAELD SAVLLTRSLL ENSTTRP00000002277/1-199 MNSVCCLVLV ALSLWPGRAA APGPPPGPPR ASPDPRAELD SAVLLTRSLL 51 100 ENSBTAP00000054291/1-203 ADTRQLAAQL VGQPAGDGQG PGPRPGGLLG YQGGRDSPRP PPGPQLPGVL ENSP00000264563/1-199 ADTRQLAAQL RDKFPADGDH NLDSLPTLAM SAGALGA--- ---LQLPGVL BACU009044/1-199 ADTRQLAAQL RDKFPADGDH NLDSLPTLAM SAGALGA--- ---LQLPGVL bmy_16781T0/1-218 ADTRQLAAQL RDKFPADGDH NLDSLPTLAM SAGALGA--- ---LQLPGVL ENSTTRP00000002277/1-199 ADTRQLAAQL RDKFPADGDH NLDSLPTLAM SAGALGA--- ---LQLPGVL 101 150 ENSBTAP00000054291/1-203 TRLRADLFSY LRHVQWLRRS GGPSLRTLEP ELGTLQARLD RLLRRLQLL- ENSP00000264563/1-199 TRLRADLLSY LRHVQWLRRA GGSSLKTLEP ELGTLQARLD RLLRRLQLL- BACU009044/1-199 TRLRADLFSY LRHVQWLRRA GGPSLRTLEP DLGALQARLD RLLRRLQLL- bmy_16781T0/1-218 TRLRADLFSY LRHVQWLRRA GGPSLRTLEP DLGTLQARLD RLLRRLQLLV ENSTTRP00000002277/1-199 TRLRADLFSY LRHVQWLRRA GGPSLRTLEP DLGALQARLD RLLRRLQLL- 151 200 ENSBTAP00000054291/1-203 ---------- ---------- -MSRLALPQV PPDPPAPPLA PPASAWGGIR ENSP00000264563/1-199 ---------- ---------- -MSRLALPQP PPDPPAPPLA PPSSAWGGIR BACU009044/1-199 ---------- ---------- -MSRLALPQA PPDPPAPPLP PPASPWGGIR bmy_16781T0/1-218 RSPGSETPGP QTPGLLRDPH PMSRLALPQA PPDPPAPPLP PPASPWGGVR ENSTTRP00000002277/1-199 ---------- ---------- -MSRLALPQA PPDPPAPALA PPASPWGGVR 201 250 ENSBTAP00000054291/1-203 AAHAILGGLQ LTLDWAVRGL LLLKTRL ENSP00000264563/1-199 AAHAILGGLH LTLDWAVRGL LLLKTRL BACU009044/1-199 AAHAILGGLH LTLDWAVRGL LLLKTRL bmy_16781T0/1-218 AAHAILGGLH LTLDWAVRGL LLLKTRL ENSTTRP00000002277/1-199 AAHAILGGLH LTLDWAVRGL LLLKTRL