KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 4 Type: P Thu May 15 18:23:49 2014 Check: 00 .. Name: ENSBTAP00000054297/1-308 Len: 491 Check: 7398 Weight: 1.00 Name: bmy_11825T0/1-478 Len: 491 Check: 4565 Weight: 1.00 Name: BACU009624/1-491 Len: 491 Check: 8327 Weight: 1.00 Name: ENSTTRP00000003465/1-462 Len: 491 Check: 1637 Weight: 1.00 // 1 50 ENSBTAP00000054297/1-308 MEMQSYYAKL LGELNEQRQR DFFCDCSIIV EGRIFKAHRN ILFANSGYFR bmy_11825T0/1-478 MEMQSYYAKL LGELNEQRQR DFFCDCSIIV EGRIFKAHRN ILFANSGYFR BACU009624/1-491 MEMQSYYAKL LGELNEQRQR DFFCDCSIIV EGRIFKAHRN ILFANSGYFR ENSTTRP00000003465/1-462 MEMQSYYAKL LGELNEQRQR DFFCDCSIIV EGRIFKAHRN ILFANSGYFR 51 100 ENSBTAP00000054297/1-308 ALLIHYIQDS GRHSTASLDI VTSDAFSTIL DFLYSGKLDL CGENVIEVMS bmy_11825T0/1-478 ALLIHYIQDS GRHSTASLDI VTSDAFSTIL DFLYSGKLDL CGENVIEVMS BACU009624/1-491 ALLIHYIQDS GRHSTASLDI VTSDAFSTIL DFLYSGKLDL CGENVIEVMS ENSTTRP00000003465/1-462 ALLIHYIQDS GRHSTASLDI VTSDAFSTIL DFLYSGKLDL CGENVIEVMS 101 150 ENSBTAP00000054297/1-308 AASYLQMNDV VNFCKTYIRS SLDICRKMEK EAAA------ ---------H bmy_11825T0/1-478 AASYLQMNDV VNFCKTYIRS SLDICGKMEK EAAVAAAVAA AAAAAAA--H BACU009624/1-491 AASYLQMNDV VNFCKTYIRS SLDICGKMEK EAAVAAAVAA AAAAAAAAAH ENSTTRP00000003465/1-462 AASYLQMNDV VNFCKTYIRS SLDICGKMEK EAAVAAAVAA AAAAAAAAPH 151 200 ENSBTAP00000054297/1-308 QMDSGSP--- KKGTAGETKS LVSRAEGEES EDRPREPPSG DLRGCCPLEL bmy_11825T0/1-478 RVDSGSPSSG REGTSCETKS LVSAAEGEES VDRPRESPRG DCRGCHPLAL BACU009624/1-491 RVESGSPSSG REGTSCETKN LVSPAEGEES VDRPRESPRG DCRGCHPLAL ENSTTRP00000003465/1-462 RVDSGSPSSG REGTSCETKS LVSPAEGEES VDRPRVSPCG DCRGCHPLAL 201 250 ENSBTAP00000054297/1-308 VGKDSQGSGW VDSDRSTRPE QMEPKVELGA AEVEVD--GQ LQPPATPLSL bmy_11825T0/1-478 VGKDSQGXGS VDSDRSIRPK QIEPKVEFDA EEVEVEVGGQ LQQRTAPLSL BACU009624/1-491 VGKDSQGSGS VDSDRSIRPK QMEPKVEFDA EGVEVEVGGQ LQQRTAPLSL ENSTTRP00000003465/1-462 VGKDSQGSGS MDSDRSIRPK QMEPKVEFDA EEVEVEVGGQ LQQRTALLSL 251 300 ENSBTAP00000054297/1-308 AHREEGLPSS QAIDLAYSNY HVKQFLEALL RNSAVQSKED VDHHFSQSLE bmy_11825T0/1-478 ADGEEGLPRG QAVDLAYSNY HVKQFLEVLL RHSAVQSKEG ADQHFSRSLE BACU009624/1-491 AHGEEGLPRG QAVDLAYSNY HVKQFLEVLL RHSAVQSKED ADQHFSRSLE ENSTTRP00000003465/1-462 AHGEEGLPRG QAVELAYSNY HVKQFLEALL RHGAVQSKED ADQHFSRSLE 301 350 ENSBTAP00000054297/1-308 GRPGGAGVAA MSSTMDVQTD WYGEDSGE-- ---------- ---------- bmy_11825T0/1-478 GRPGGAEVAA MSSVMDVQTD WYGEDSGGVL VVPIKLHKCP FCPYTAKQKG BACU009624/1-491 GRPGGAEVAA MSSMMDVQTD WYGEDSGGVL VVPIKLHKCP FCPYTAKQKG ENSTTRP00000003465/1-462 GRPGGAEVAA MSSMMDVQTD WYGEDSGGVL VVPIKLHKCP FCPYTAKQKG 351 400 ENSBTAP00000054297/1-308 ---------- ---------- ---------- ---------- ---------- bmy_11825T0/1-478 ILKRHIRSHT GERPYPCETC GKRFTRQEHL RGHALS---- -------GCR BACU009624/1-491 ILKRHIRSHT GERPYPCETC GKRFTRQEHL RGHALSVHRS NRPIICKGCR ENSTTRP00000003465/1-462 ILKRHIRSHT GERPYPCETC GKRFTRQEHL RGHALSVHRS NRPIICKGCR 401 450 ENSBTAP00000054297/1-308 ---------- ---------- ---------- ---------- ---------- bmy_11825T0/1-478 RTFTSHLSQG LRRFGLCDSC TCVTDTHDDD DELMPINLSL VEASSESQEK BACU009624/1-491 RTFTSHLSQG LRRFGLCDSC TCVTDTHDDD DELMPINLSL VEASSESQEK ENSTTRP00000003465/1-462 RTFTSHLSQG LRRFGLCDSC TCVTDTHDDD DELMPINLSL VEASS-SQEK 451 500 ENSBTAP00000054297/1-308 ---------- ---------- ---------- ---------- - bmy_11825T0/1-478 SDTDNDWPIY VESGEENDPG GEDLDDRPQI QPRLSDGEML T BACU009624/1-491 SDTDNDWPIY VESGEENDPG REDSDDRPQI QPSLSDGEML T ENSTTRP00000003465/1-462 SDTDNDWPIY VES------- ---------- ---------- -