KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 18:23:54 2014 Check: 00 .. Name: ENSBTAP00000054333/1-222 Len: 397 Check: 3586 Weight: 1.00 Name: BACU001995/1-390 Len: 397 Check: 9173 Weight: 1.00 Name: bmy_00958T0/1-213 Len: 397 Check: 4894 Weight: 1.00 Name: ENSP00000352414/1-216 Len: 397 Check: 2065 Weight: 1.00 Name: ENSTTRP00000007619/1-216 Len: 397 Check: 2205 Weight: 1.00 // 1 50 ENSBTAP00000054333/1-222 MGAAR----- ---------- ---------- ---------- ---------- BACU001995/1-390 MNLSRTSSTS EKATLALLWG CELSQEKPTW TFRPQKVGKQ DCTLLLSTIC bmy_00958T0/1-213 ---------- ---------- ---------- ---------- ---------- ENSP00000352414/1-216 MGAAR----- ---------- ---------- ---------- ---------- ENSTTRP00000007619/1-216 MGAAR----- ---------- ---------- ---------- ---------- 51 100 ENSBTAP00000054333/1-222 ---------- ---------- ---------- ---------- -LLPNLTLC- BACU001995/1-390 LGEKAKEEMN LVEILPPASQ DDRKRKPITL ASLRASVLPM VVLAGLELSP bmy_00958T0/1-213 ---------- ---------- ---------- ---------- ---MDLRWCH ENSP00000352414/1-216 ---------- ---------- ---------- ---------- -LLPNLTLC- ENSTTRP00000007619/1-216 ---------- ---------- ---------- ---------- -LLPNLTLC- 101 150 ENSBTAP00000054333/1-222 ---LQL---- --LILCCQT- ---------- ---------- ---------- BACU001995/1-390 PVTFQLRAGS GPVFLCGQEC YNQSWEEEEE EEEDLEEEEE EDDDDDEDTD bmy_00958T0/1-213 PKQIDT---- --IFPLVTA- ---------- ---------- ---------- ENSP00000352414/1-216 ---LQL---- --LILCCQT- ---------- ---------- ---------- ENSTTRP00000007619/1-216 ---LQL---- --LILCCQT- ---------- ---------- ---------- 151 200 ENSBTAP00000054333/1-222 ---------- ---------- ---------- ---------- -------QG- BACU001995/1-390 VSLEEETPVK QVKRLAPQKH TSVAKKKKVE KEEVAVRYHP KDRSPVGKGE bmy_00958T0/1-213 ---------- ---------- ---------- ---------- -------KGE ENSP00000352414/1-216 ---------- ---------- ---------- ---------- -------QGE ENSTTRP00000007619/1-216 ---------- ---------- ---------- ---------- -------QGE 201 250 ENSBTAP00000054333/1-222 NEVKPREREH ERDRCAPCRR VSRQEVVCFS PIQRCRWTQI QKSGPLLHPW BACU001995/1-390 NHPSPNFNQY VRDQGAMTDQ LSRRQIREYQ LYSRTSGKHV QVTGRRIS-- bmy_00958T0/1-213 NHPSPNFNQY VRDQGAMTDQ LSRRQIREYQ LYSRTSGKHV QVTGRRIS-- ENSP00000352414/1-216 NHPSPNFNQY VRDQGAMTDQ LSRRQIREYQ LYSRTSGKHV QVTGRRIS-- ENSTTRP00000007619/1-216 NHPSPNFNQY VRDQGAMTDQ LSRRQIREYQ LYSRTSGKHV QVTGRRIS-- 251 300 ENSBTAP00000054333/1-222 AGSPNGRRFL PLPTAKLIVE TDTFGSRVRI KGAESEKYIC MNKRGKLIGK BACU001995/1-390 ATAEDGNKF- ----AKLIVE TDTFGSRVRI KGAESEKYIC MNKKGKLIGK bmy_00958T0/1-213 ATAEDGNKF- ----AKLIVE TDTFGSRVRI KGAESEKYIC MNKKGKLIGK ENSP00000352414/1-216 ATAEDGNKF- ----AKLIVE TDTFGSRVRI KGAESEKYIC MNKRGKLIGK ENSTTRP00000007619/1-216 ATAEDGNKF- ----AKLIVE TDTFGSRVRI KGAESEKYIC MNKRGKLIGK 301 350 ENSBTAP00000054333/1-222 PSGKSKDCVF TEIVLENNYT AFQNARHEGW FMAFTRQGRP RQASRSRQNQ BACU001995/1-390 PSGKSKDCVF TEIVLENNYT AFQNARHEGW FMAFTRQGRP RQASRSRQNQ bmy_00958T0/1-213 PSGKSKDCVF TEIVLENNYT AFQNARHEGW FMAFTRQGRP RQASRSRQNQ ENSP00000352414/1-216 PSGKSKDCVF TEIVLENNYT AFQNARHEGW FMAFTRQGRP RQASRSRQNQ ENSTTRP00000007619/1-216 PSGKSKDCVF TEIVLENNYT AFQNARHEGW FMAFTRQGRP RQASRSRQNQ 351 400 ENSBTAP00000054333/1-222 REAHFIKRLY QGQLPFPNHA ERQKQFEFVG SAPTRRTKRT RRPQPLT BACU001995/1-390 REAHFIKRLY QGQLPFPNHA ERQKQFEFVG SAPTRRTKRT RRPQPLT bmy_00958T0/1-213 REAHFIKRLY QGQLPFPNHA ERQKQFEFVG SAPTRRTKRT RRPQPLT ENSP00000352414/1-216 REAHFIKRLY QGQLPFPNHA EKQKQFEFVG SAPTRRTKRT RRPQPLT ENSTTRP00000007619/1-216 REAHFIKRLY QGQLPFPNHA ERQKQFEFVG SAPTRRTKRT RRPQPLT