KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 4 Type: P Thu May 15 18:24:03 2014 Check: 00 .. Name: ENSBTAP00000054395/1-468 Len: 468 Check: 7298 Weight: 1.00 Name: ENSTTRP00000002775/1-466 Len: 468 Check: 8517 Weight: 1.00 Name: bmy_12194T0/1-434 Len: 468 Check: 5814 Weight: 1.00 Name: BACU011850/1-465 Len: 468 Check: 5305 Weight: 1.00 // 1 50 ENSBTAP00000054395/1-468 MQVDNQVSPG KVPYFCSVRY GIAVFLLLCN VIIMSQRVCL SLTMIAMVNS ENSTTRP00000002775/1-466 -MMDNQVPPR KVPNFCSIRY GIALLLLLCN VIVMSQRVCM SLTMIAMVNS bmy_12194T0/1-434 ---------- ---------- ---------- ---MSQRVCM SLTMITMVNS BACU011850/1-465 --MDNQVPPR KVPNFCSIRY GIALLLLLCN VIIMSQRVCM SLTMITMVNS 51 100 ENSBTAP00000054395/1-468 TEPHGLSNTS TKELQDNIKN PVYNWSTEIQ GIMLSSIFYG VLISQIPAGY ENSTTRP00000002775/1-466 TEPHGLSNTS TKEPQDNIKN PVYNWSTEIQ GIMLSSIFYG ILISQIPARY bmy_12194T0/1-434 TEPHGLSNTS TKEPQDNIKN PVYNWSTEIQ GIMLSSIFYG ILISQIPAGY BACU011850/1-465 TEPHGLSNTS TKEPQDNIKN PVYNWSTEIQ GIMLSSIFYG ILISQIPAGY 101 150 ENSBTAP00000054395/1-468 LSGIYSLKKM IGFALLLSSL FTLLLPLAAE FGEILVIICR VIKGLFQGIT ENSTTRP00000002775/1-466 FSGIYSLKKM VGSALFLSSL FTLLIPLATD FAKPLVIICR VFQRLFRGIA bmy_12194T0/1-434 LSGIYSLKKM VGSALFLSSL FTLLIPLAAE FGEALVIICR VIQGLFQGIA BACU011850/1-465 LSGIYSLKKM VGSALFLSSL FTLLIPLAAE FGEALVIICR VIQGLFQGIA 151 200 ENSBTAP00000054395/1-468 LTTQQVIWIK WAPPLELGRL TALSLSGLLL GPCIVLLITG FICDSLGWPM ENSTTRP00000002775/1-466 LTTQQVVWVK WAPPLEQVRL TSLSLSGLLL GPCVVLLITG FICDSLGWPM bmy_12194T0/1-434 LTTQQVVWIK WAPPLEQVRL TSLSLSGLLL GPCVVLLITG FICDSLGWPM BACU011850/1-465 LTTQQVVWIK WAPPLEQVRL TSLSLSGLLL GPCVVLLITG FICDSLGWPM 201 250 ENSBTAP00000054395/1-468 VFYIFGACGC ALSVLWFILF YEDPKDHPFI SNREKEYITS ALTQQVSSST ENSTTRP00000002775/1-466 VFYIFGACGC ALSLLWFVLF YEDPKDHPCI SKSEKEYITS ALTQQVSSSA bmy_12194T0/1-434 VFYIFGACGC ALSLLWFILF YEDPKDHPCI SKSEKEYITS ALAQQVSSSA BACU011850/1-465 VFYIFGACGC ALSLLWFVLF YEDPKDHPCI SKSEKEYITS ALTQQVSSSA 251 300 ENSBTAP00000054395/1-468 LIKVPIKAML KSTPLWVISL CNFAFFWSNT FLSIYIPIYI DYKLHVDVEE ENSTTRP00000002775/1-466 P-SLPIKAVL KSPPLWVISL CNFAFFWANS FLSLYTPMFI NSKFHINVKE bmy_12194T0/1-434 S-SLPIKAML KSPPLWVISL CNFAFFWANS FLSLYTPMFI NSKFHINVKE BACU011850/1-465 P-SLPIKAML KSPPLWVISL CNFAFFWANS FLSLYTPMFI NSKFHINVKE 301 350 ENSBTAP00000054395/1-468 NGLLSSLPHL FAWIFAVLAG YMADIFQTRN TFSLVTIRKL FTSLGLLLPS ENSTTRP00000002775/1-466 NGLLSSLPHL FAWIFAILAG HMADVFLSRN ILSLLTIRKL FTLLGLLLPA bmy_12194T0/1-434 NGLLSSLPHL FAWIFAILAG HMSDVFLSRN ILSLLTIRKL FTLLGLLLPA BACU011850/1-465 NGLLSSLPHL FAWIFAILAG HMSDIFLSKN ILSLLTIRKL FTLLGLLLPA 351 400 ENSBTAP00000054395/1-468 LFSLCLLYLS SSYYATIIFL ILANSTGSFA MGGIIINVLD IAPRYYGFLR ENSTTRP00000002775/1-466 LFSLCLLYLS SSFHGTMIFL ILANATGSFC MGGILINVLD IAPRYYGFLK bmy_12194T0/1-434 LFSLCLLFLS SSFHGTMIFL ILANATGSFC MGGILINVLD IAPRYYGFLK BACU011850/1-465 LFSLCLLYLS SSFHGTMIFL ILANATGSFC MGGILINVLD IAPRYYGFLK 401 450 ENSBTAP00000054395/1-468 GITNVIGLTG GLIASTVTGI ILSEDAESPW LKIFLLMIAN NMISLIFYLI ENSTTRP00000002775/1-466 GFTNVIGLTG GLVASTVTGV ILSQDQDSPW LKIFFMMVAN NVISLIFYLI bmy_12194T0/1-434 GFTNVIGLTG GLVASTVTGV ILSQDQGSPW LKIFFMMVAN NVISLIFYLI BACU011850/1-465 GFTNVIGLTG GLVASTVTGV ILSQDQDSPW LKIFFMMVAN NVISLIFYLI 451 500 ENSBTAP00000054395/1-468 FAKAEVQEWA KERQNTYL ENSTTRP00000002775/1-466 FAKAEIQDWA KETQNTYL bmy_12194T0/1-434 FAKAEIQDWA KETQNTYL BACU011850/1-465 FAKAEIQDWA KETQNTYL