KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 18:24:05 2014 Check: 00 .. Name: ENSP00000360576/1-606 Len: 626 Check: 6696 Weight: 1.00 Name: ENSBTAP00000054403/1-597 Len: 626 Check: 3623 Weight: 1.00 Name: ENSTTRP00000014556/1-582 Len: 626 Check: 7606 Weight: 1.00 Name: BACU009825/1-582 Len: 626 Check: 3578 Weight: 1.00 Name: bmy_13876T0/1-606 Len: 626 Check: 4174 Weight: 1.00 // 1 50 ENSP00000360576/1-606 ---------M PSPQLLVLFG SQTGTAQDVS ERLGREARRR RLGCRVQALD ENSBTAP00000054403/1-597 ---------M PSARLLVLFG SQTGTAQDVS ERLGREARRR QLSCRVEELD ENSTTRP00000014556/1-582 ---------M PNTRLLVLFG SQTGTAEDVS ERLRREARRR ELGCRVQALD BACU009825/1-582 ---------M PNTRLLVLFG SQTGTAQDVS ERLSREAWRR ELGCRVQALD bmy_13876T0/1-606 MQGSPGRTPM PNTRLLVLFG SQTGTAQDVS ERLSREARRR ELGCRVQALD 51 100 ENSP00000360576/1-606 SYPVVNLINE PLVIFVCATT GQGDPPDNMK NFWRFIFRKN LPSTALCQMD ENSBTAP00000054403/1-597 SYPVVNLINE PLVIFVCATT GQGDPPDNMK SFWRFIFRRS LPSTALRQMD ENSTTRP00000014556/1-582 SYPVVNLINE PLVIFVCATT GQGEPPDNMK SFWRFIFRRN LPSTSLCQMD BACU009825/1-582 SYPV------ ---------- ---------- NFWRFIFRRN LPSTSLCQMD bmy_13876T0/1-606 SYPVVNLINE PLVIFVCATT GQGEPPDNMK NFWRFIFRRN LPSTSLCQMD 101 150 ENSP00000360576/1-606 FAVLGLGDSS YAKFNFVAKK LHRRLLQLGG SALLPVCLGD DQHELGPDAA ENSBTAP00000054403/1-597 FAVLGLGDSS YAKFNFVAKK LHRRLLQLGG SALLPVCLGD DQHELGPDAA ENSTTRP00000014556/1-582 FAVLGLGDSS YAKFNFVAKK LHRRLLQLGG SALLPVCLGD DQHELGPDAT BACU009825/1-582 FAVLGLGDSS YAKFNFVAKK LHRRLLQLGG SALLPVCLGD DQHELGPDAT bmy_13876T0/1-606 FAVLGLGDSS YAKFNFVAKK LHRRLLQLGG SALLPVCLGD DQHELGPDAT 151 200 ENSP00000360576/1-606 VDPWLRDLWD RVLGLYPPPP GLTEIPPGVP LPSKFTLLFL QEAPSTGSEG ENSBTAP00000054403/1-597 IDPWLQDLWE KVLGPHPVPL NLDLSPPGVL WPSKFTLQFL KDTPSSGPEE ENSTTRP00000014556/1-582 IDPWLHDLWE KVLGPHPLPL DLGLSPPGIP WPSKFTLKFL QEVPSTCSEE BACU009825/1-582 IDPWLHDLWE KVLGPHPLPL DLSLTPPGVP WPSKFTLKFL QEVPSTCSEE bmy_13876T0/1-606 IDPWLHDLWE KVLGPHPLPL DLSLTPPGVP WPSKFTLKFL QEVPSTCSEE 201 250 ENSP00000360576/1-606 QRVAHPGSQE PPSESKPFLA PMISNQRVTG PSHFQDVRLI EFDILGSGIS ENSBTAP00000054403/1-597 LCAAGTDPQG PPSELQPFLA PMVSNQRVTG PSHFQDVRLI EFDISGSGIS ENSTTRP00000014556/1-582 LCVAGTDPQG PPSELQPFLA AMVTNQRVTG PSHFQDVRLI EFDITGSGVS BACU009825/1-582 PCVTGTDPQG PPSELQPFLA PMVTNQRVTG PSHFQDVRLI EFDITGSGVS bmy_13876T0/1-606 LCVTGTDPQG PPSELQPFLA PMVTNQRVTG PSHFQDVRLI EFDITGSGVS 251 300 ENSP00000360576/1-606 FAAGDVVLIQ PSNSAAHVQR FCQVLGLDPD QLFMLQPREP DVSSPTRLPQ ENSBTAP00000054403/1-597 FAAGDLVLIQ PENTASHVQQ FCQALGLDPE QHFTLQPREP GVTCPTRLPQ ENSTTRP00000014556/1-582 FVAGDVVLIQ PENTASHVQQ FCQALGLDPD QHFTLQLREP GVPCPARLPQ BACU009825/1-582 FVAGDVVLIQ PENTASHVQQ FCQALGLDPD QHFTLQPREP GVPCPARLPQ bmy_13876T0/1-606 FVAGDVVLIQ PENTASHVQQ FCQALGLDPD QHFTLQPREP GVPCPARLPQ 301 350 ENSP00000360576/1-606 PCSMR----- ------HLVS HYLDIASVPR RSFFELLACL SLHELEREKL ENSBTAP00000054403/1-597 PCSVR----- ------RLVS QYLDIASVPR RSFFELLACL SPHELEREKL ENSTTRP00000014556/1-582 PCSIQ----- ------RLVS QYLDIASVPR RSFFELLACL SCHELEREKL BACU009825/1-582 PCSIQRLVSQ YLDIASRLVS QYLDIASVPR RSFFELLACL SCHELEREKL bmy_13876T0/1-606 PCSIQ----- ------RLVS QYLDVASVPR RSFFELLACL SCHELEREKL 351 400 ENSP00000360576/1-606 LEFSSAQGQE ELFEYCNRPR RTILEVLCDF PHTAAAIPPD YLLDLIPVIR ENSBTAP00000054403/1-597 WEFGSARGQE ELCEYCTRPR RTALEVLCDF PHTAAAVPPD YLLDLLPLIR ENSTTRP00000014556/1-582 LEFSSAQGQE ELCEYCTRPR RTVLEVLCDF PHTAGAIPPD YLLDLIPLIR BACU009825/1-582 LELSSAQGQE DLCEYCTRPR RTVLEVLCDF PHTAGAIPPD RLLDLIPLIR bmy_13876T0/1-606 LELSSAQGQE DLCEYCTRPR RTVLEVLCDF PHTAGAIPPD YLLDLIPLIR 401 450 ENSP00000360576/1-606 PRAFSIASSL LTHPSRLQIL VAVVQFQTRL KEPRRGLCSS WLASLDPGQG ENSBTAP00000054403/1-597 PRAFSIASSL RAHPSRLQIL VAVVQYQTRL REPRRGLCSS WLASLDPAQG ENSTTRP00000014556/1-582 PRAFSIASSL LAHPSRLQIL VAVVQYQTRL KEPRRGLCSN WLASLDPGQG BACU009825/1-582 PRAFSIASSL LAHPSRLQIL VAVVQYQTRL KEPRRGLCSN WLASLDPGQG bmy_13876T0/1-606 PRAFSIASSL LAHPSRLQIL VAVVQYQTRL KEPRRGLCSN WLASLDPGQG 451 500 ENSP00000360576/1-606 PVRVPLWVRP GSLAFPETPD TPVIMVGPGT GVAPFRAAIQ ERVAQGQTGN ENSBTAP00000054403/1-597 PVRVPLWVRS GGLTFPKTPD VPVIMVGPGT GVAPFRAAIQ ERVAQGETGN ENSTTRP00000014556/1-582 PVRVPLWVRS GGLTFPKTPD TPVIMVGPGT GVAPFRAAIQ ERVAQGETGN BACU009825/1-582 PVRVPLWVRS GGLTFPKTPD TPVIMVGPGT GVAPFRAAIQ ERVAQGETGN bmy_13876T0/1-606 PVRVPLWVRS GGLXFPKTPD TPVIMVGPGT GVAPFRAAIQ ERVAQGETGN 501 550 ENSP00000360576/1-606 FLFFGCRWRD QDFYWEAEWQ ELEKRDCLTL IPAFSREQPP ALFSALQEQK ENSBTAP00000054403/1-597 VLFFGCRRRD QDFYWEAEWE QLQARGCLTL VTAFSRE--- ------QEQK ENSTTRP00000014556/1-582 VLFFGCRQRD QDFYWEAEWK ELQTRGCLTL VTAFSREQP- --VPALQEQK BACU009825/1-582 VLFFGCRQRD QDCCWEAEWT ELQTRGCLTL VTAFSRE--- ------QEQK bmy_13876T0/1-606 VLFFGCRQRD QDFYWEAEWK ELQTRGCLTL VTAFSRE--- ------QEQK 551 600 ENSP00000360576/1-606 VYVQHRLREL GSLVWELLDR QGAYFYLAGN AKSMPADVSE ALMSIFQEEG ENSBTAP00000054403/1-597 VYVQHRLRAL GPLVWELLDG RGAHFYLAGN AKYMPADVCD TLLSIFREEG ENSTTRP00000014556/1-582 VYVQHRLREL GPLVWGLLDL RGAHFYLAGN AKYMPADVSD ALTSIFQEEG BACU009825/1-582 VYVQHRLREL GPLVWGLLDL RGAHFYLAGN AKYMPADVSD ALTSIFQEEG bmy_13876T0/1-606 VYVQHRLREL GPLVWGLLDL RGAHFYLAGN AKYMPADVSD ALTSIFQEEG 601 650 ENSP00000360576/1-606 GLCSPDAAAY LARLQQTRRF QTETWA ENSBTAP00000054403/1-597 GLSDPDAAAY LAQLQRTLRF QTETWA ENSTTRP00000014556/1-582 GLSGP----- ---------- ------ BACU009825/1-582 GLSGPAAAAY LARLQRTLRF QTETWA bmy_13876T0/1-606 GLSGPAAAAY LARLQRTLRF QTETWA