KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 4 Type: P Thu May 15 18:24:13 2014 Check: 00 .. Name: ENSP00000385592/1-192 Len: 347 Check: 2991 Weight: 1.00 Name: ENSTTRP00000007504/1-178 Len: 347 Check: 2506 Weight: 1.00 Name: ENSBTAP00000054452/1-279 Len: 347 Check: 184 Weight: 1.00 Name: bmy_22133T0/1-267 Len: 347 Check: 5971 Weight: 1.00 // 1 50 ENSP00000385592/1-192 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000007504/1-178 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000054452/1-279 MMWPLGTSSS HSPAWTRLLL TGTLLAFSTC SASLELLSSV SLDPLTEGAS bmy_22133T0/1-267 ---------- ---------- ---------- ---------- ---------- 51 100 ENSP00000385592/1-192 ---------- ---------- -MRAKPQSPL PRN--PVPAW ---------- ENSTTRP00000007504/1-178 ---------- ---------- -----ERSPF SRD--PAPA- ---------- ENSBTAP00000054452/1-279 AHLPVPRSLD RVLATSWFRG HEVRPEAMIF SPEGLPGPGH TGRETLDTQG bmy_22133T0/1-267 ---------- ---------- -------MIF SPEGLPGPGH TGRETLDTQG 101 150 ENSP00000385592/1-192 -------SPP TTTTDPMLEK DAAG-----G DFPANLVLQL MPLKTFPAAI ENSTTRP00000007504/1-178 -------CSP PTATNPVLEK SAPG-----G DFPAHLDSDG VLPLTFPGNT ENSBTAP00000054452/1-279 SLIIRNVTTL DAGSYMVVLE TSRGRRSGLE QIPIKATYDG VQLVTFPGNR bmy_22133T0/1-267 SLVIRNVTTQ DAGSYTVVLE TSRGRRSATE QIQVNANSDG VLLLTFPGNT 151 200 ENSP00000385592/1-192 RGVIQSELNY SVILQWVVTM DPEPVLSWTF SGVPCGMGEK LFIRRLSCEQ ENSTTRP00000007504/1-178 QGILRSELNY SVILQWVASI EPEPVLR-TF SGHPRGIGER LIIQRLSLED ENSBTAP00000054452/1-279 QGILRSELNY SVILQWAALI TPEPVLRWTF NGRPRGTGER LIIHRLSMQD bmy_22133T0/1-267 QGILRSELNY SVILQWVASI EPEPVLRWTF NGHPRGIGER LIIQRLSLED 201 250 ENSP00000385592/1-192 LGTYMCIATN SKKQLVSEPV TISLPKP--- ---------- --------IM ENSTTRP00000007504/1-178 LGTYVRLAED SQGMYVSQPV TIMLPQA--- ---------- --------VV ENSBTAP00000054452/1-279 LGTYLCLAEN SERVYLSHPV TIMLPQA--- ---------- --------DV bmy_22133T0/1-267 LGTYVCLAEN SQGMYFSQPV TIMLPREYPT VTPDPCWSVA RAGDLAEDVV 251 300 ENSP00000385592/1-192 QPTEAEPMEP DPTLSLSGGS AIGLLAAGIL GAGALIAGMC FIIIQSLRTD ENSTTRP00000007504/1-178 DPTDPVPIKP NPTLSLSGSS AFALTAAAPV ---VLVGSAV FTIIWKLGVQ ENSBTAP00000054452/1-279 EPTEPAPISQ KPPLSLSGGS AIALIMAASV AGLVLVGSML FTFIQKLRSG bmy_22133T0/1-267 DPTDPVPIKP NPTLSLSGSS AFALIVAAPV ---VLVGSTV FTIIWKLRYL 301 350 ENSP00000385592/1-192 RQRIGICS-- ---------- ---------- ---------- ------- ENSTTRP00000007504/1-178 MSI------- ---------- ---------- ---------- ------- ENSBTAP00000054452/1-279 ---------- ---------- ---------- ---------- ------- bmy_22133T0/1-267 PSLLPIHSAP TRRRAHSAAR LKPNQLPHPK ELKAHSERMT LTPDVPI