KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 4 Type: P Thu May 15 18:24:14 2014 Check: 00 .. Name: BACU004973/1-194 Len: 271 Check: 2838 Weight: 1.00 Name: ENSTTRP00000005037/1-236 Len: 271 Check: 1528 Weight: 1.00 Name: bmy_01345T0/1-191 Len: 271 Check: 1560 Weight: 1.00 Name: ENSBTAP00000054461/1-243 Len: 271 Check: 9953 Weight: 1.00 // 1 50 BACU004973/1-194 MMISLKAEPQ EQSQTRDSTF LIPLSPRRLG KCPPAGAFWD MLLWPPWNHE ENSTTRP00000005037/1-236 ------VPP- ------DSAL ESPFEEMALV R---GGWLW- ---------- bmy_01345T0/1-191 MSPAAPVPP- ------DSAL ESPFEEMALV R---GGWLW- ---------- ENSBTAP00000054461/1-243 MSPAAPVPP- ------DSTL ESPFEEMALV R---GGWLW- ---------- 51 100 BACU004973/1-194 PCSSGSILRR WKRNWFALWL DGTLGYYHDE TAQDEEDRVL IHFNVRDIKI ENSTTRP00000005037/1-236 --RQSSILRR WKRNWFALWL DGTLGYYQDE TAQDEEDRVP IRFNVRDIKI bmy_01345T0/1-191 --RQ------ ---------- ---------- ---------- ---------- ENSBTAP00000054461/1-243 --RQSSILRR WKRNWFALWL DGTLGYYHDE TAQDEEDRVL IHFNVRDIKI 101 150 BACU004973/1-194 GEECRDVQPP EGRSRDGLLT VNLREGSRLH LCAETRDDAI ---------- ENSTTRP00000005037/1-236 GQECHDVQPP EGRSRDGLLI VNLREGGRLY LCAETQDDAI AWKTALLEAN bmy_01345T0/1-191 -----NVQPP EGRSRDGLLT VNLREGSRLH LCAETRDDAI AWKTALLEAN ENSBTAP00000054461/1-243 GQECHDVQPP EGRSRDGLLT VNLREGSRLH LCAETRDDAI AWKTALLEAN 151 200 BACU004973/1-194 ---------- ---------- ---------- ---------- ---PYQDYYE ENSTTRP00000005037/1-236 STPAPAGATV PPRSRRVCPK VRCVTCSWSP CNVERRIWVR IYSPYQNYYG bmy_01345T0/1-191 STPAPAGATV PPRSRRVCPK VRCVTRSWSP CKVERRIWVR VYSPYQDYYE ENSBTAP00000054461/1-243 STPAPAGATV PPRSRRVCPK VRCVTRSWSP CKVERRIWVR VYSPYQDYYE 201 250 BACU004973/1-194 VVPPNAHEAT YVRSYYGPTY GGTLRKAPSP SH----DSER FLNQSPFPLQ ENSTTRP00000005037/1-236 VVPPNGHDAT YVRSYYGPTY -G-----PGV THVVVREDPC YSAGAPLAMS bmy_01345T0/1-191 VVPPNAHEAM YVRSYYGPTY -G-----PGV THVVVRDDPC YSAGAPLAMG ENSBTAP00000054461/1-243 VVPPNAHETT YVRSYYGPPY VG-----PGV THVVVREDPC YSAGAPLAMG 251 300 BACU004973/1-194 S--------- ---------- - ENSTTRP00000005037/1-236 MLAGAATGAA LGSLMWSPCW F bmy_01345T0/1-191 MLAGAATGAA LGSLMWSPCW F ENSBTAP00000054461/1-243 MLAGAATGAA LGSLMWSPCW F