KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 4 Type: P Thu May 15 18:24:14 2014 Check: 00 .. Name: ENSBTAP00000054475/1-256 Len: 335 Check: 7011 Weight: 1.00 Name: bmy_14834T0/1-200 Len: 335 Check: 2159 Weight: 1.00 Name: ENSP00000360660/1-325 Len: 335 Check: 6530 Weight: 1.00 Name: BACU009835/1-221 Len: 335 Check: 1390 Weight: 1.00 // 1 50 ENSBTAP00000054475/1-256 MAGAGLASSG VGAGWPRQHH FWAGAESGPL RCFS---SSA SFPDTAACPG bmy_14834T0/1-200 ---MFLAASG AGARCRRDEG DPATAPPQQL PSL----PPD DLVGAGVQNG ENSP00000360660/1-325 ------MATP LPPPSPRHLR LLRLLLSGLV LGAALRGAAA GHPDVAACPG BACU009835/1-221 ---------- ---------- ---------- ---------- -----AVCPG 51 100 ENSBTAP00000054475/1-256 SLDCALKRRA RCPPGAHVCG PCLQPFQEDR QGLCVPRMRQ PLGEGLHQPR bmy_14834T0/1-200 ASPHSLGGPA RLGSGGSGPG DALSP----- -----RSSHR FVGEGLPQPR ENSP00000360660/1-325 SLDCALKRRA RCPPGAHACG PCLQPFQEDQ QGLCVPRMRR PPGGGRPQPR BACU009835/1-221 SLDCALKRRA RCPPGARVCG PCLQPFQEDQ QGLCVPRTRQ PLGEGLPQPR 101 150 ENSBTAP00000054475/1-256 LEEEIDFLAQ ELARQEAGRP RLKAPPQLEA QQRPPEAAAT LGLSERGQGL bmy_14834T0/1-200 LEDEIDFLAQ ELARQEAGHS RLTAPPQPEG RQRLLEAAST LGLSERGRGP ENSP00000360660/1-325 LEDEIDFLAQ ELARKESGHS ---TPPLPKD RQRLPEPA-T LGFSARGQGL BACU009835/1-221 LEDEIDFLAQ ELARQEAGHS RLTAPPQPEG RQRLLEAAST LGLSERGRGP 151 200 ENSBTAP00000054475/1-256 DLGLPSTRGA PAPTPRPSLG PAVSSGPVHM SPLEPRGGHG DGLTLALILA bmy_14834T0/1-200 NLGLPSTRGA PTPR-TSSLR STVSSGPVHM SPLEPRGGRD DSLALLLIVA ENSP00000360660/1-325 ELGLPSTPGT PTPTPHTSLG SPVSSDPVHM SPLEPRGGQG DGLALVLILA BACU009835/1-221 NLGLPSTRGA PTPR-TSSLR STVSSGPVHM SPLEPRGGRG DSLALP---- 201 250 ENSBTAP00000054475/1-256 CSVAGAAALA VAALFWWRLQ QDIRLTQKAE YAVKQGPSSP APPGISPGDQ bmy_14834T0/1-200 CSVAGAAALA VAVFCWCR-- ---------- ---------- ---------- ENSP00000360660/1-325 FCVAGAAALS VASLCWCRLQ REIRLTQKAD YATAKAPGSP AAPRISPGDQ BACU009835/1-221 ---TGT---- -----W-RVR ED-------- ---------- --PTILPP-- 251 300 ENSBTAP00000054475/1-256 RLAHSAEMY- ---------- ---------- ---------- ---------- bmy_14834T0/1-200 ---------- ---------- ---------- ---------- ---------- ENSP00000360660/1-325 RLAQSAEMYH YQHQRQQMLC LERHKEPPKE LDTASSDEEN EDGDFTVYEC BACU009835/1-221 ---------- ---------- -PRHKEPPKE LDSASSDEEN EDGDFTVYEC 301 350 ENSBTAP00000054475/1-256 ---------- ---------- ---------- ----- bmy_14834T0/1-200 ---------- ---------- ---------- ----- ENSP00000360660/1-325 PGLAPTGEME VRNPLFDHAA LSAPLPAPSS PPALP BACU009835/1-221 PGLAPTGEME VRNPLFDHAS LSA------- -PPLQ