KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 18:24:15 2014 Check: 00 .. Name: bmy_05096T0/1-620 Len: 702 Check: 9483 Weight: 1.00 Name: ENSP00000264932/1-664 Len: 702 Check: 5667 Weight: 1.00 Name: ENSBTAP00000054495/1-677 Len: 702 Check: 4061 Weight: 1.00 Name: BACU014745/1-671 Len: 702 Check: 6858 Weight: 1.00 Name: ENSTTRP00000005884/1-643 Len: 702 Check: 177 Weight: 1.00 // 1 50 bmy_05096T0/1-620 ---------- ---------- ---------- ------MSGI GVVSRLLRAR ENSP00000264932/1-664 ---------- ---------- ---------- ------MSGV RGLSRLLSAR ENSBTAP00000054495/1-677 ---SARDRLT APEGG----- ---------- ------HSGV AAVSRLWRAR BACU014745/1-671 MCAGVESRLT TVGPGRGDVR RRGLRGGLAG RRWRADMSGI GVVSRLLRAR ENSTTRP00000005884/1-643 ---------- ---------- ---------- ---------- ---------- 51 100 bmy_05096T0/1-620 RLALTWAQRP AALQTGARSF HFTVDSSKRS SAKVSDAIST QYPVVDHEFD ENSP00000264932/1-664 RLALAKA-WP TVLQTGTRGF HFTVDGNKRA SAKVSDSISA QYPVVDHEFD ENSBTAP00000054495/1-677 RLALTCTKWP AAWQTGTRSF HFTVDGNKRS SAKVSDAISA QYPVVDHEFD BACU014745/1-671 RLALTWAQRP AALQTGARSF HFTVDSSKRS SAKVSDAIST QYPVVDHEFD ENSTTRP00000005884/1-643 --------RP AASHTGARSF HFTVDSSKRS SAKVSDAIST QYPVVDHEFD 101 150 bmy_05096T0/1-620 AVVVGAGGAG LRAAFGLSEA GFNTACVTKL FPTRSHTVAA QGGINAALGN ENSP00000264932/1-664 AVVVGAGGAG LRAAFGLSEA GFNTACVTKL FPTRSHTVAA QGGINAALGN ENSBTAP00000054495/1-677 AVVVGAGGAG LRAAFGLSEA GFNTACVTKL FPTRSHTVAA QGGINAALGN BACU014745/1-671 AVVVGAGGAG LRAAFGLSEA GFNTACVTKL FPTRSHTVAA QGGINAALGN ENSTTRP00000005884/1-643 AVVVGAGGAG LRAAFGLSEA GFNTACVTKL FPTRSHTVAA QGGINAALGN 151 200 bmy_05096T0/1-620 MEEDNWRWHF YDTVKGSDWL GDQDAIHYMT EQAPASVVEL ENYGMPFSRT ENSP00000264932/1-664 MEEDNWRWHF YDTVKGSDWL GDQDAIHYMT EQAPAAVVEL ENYGMPFSRT ENSBTAP00000054495/1-677 MEEDNWRWHF YDTVKGSDWL GDQDAIHYMT EQAPASVVEL ENYGMPFSRT BACU014745/1-671 MEEDNWRWHF YDTVKGSDWL GDQDAIHYMT EQAPASVVEL ENYGMPFSRT ENSTTRP00000005884/1-643 MEEDNWRWHF YDTVKGSDWL GDQDAIHYMT EQAPASVVEL ENYGMPFSRT 201 250 bmy_05096T0/1-620 EGGKIYQRAF GGQSLQFGKG GQAHRCCCVA DRTGHSLLHT LYGRSLRYDT ENSP00000264932/1-664 EDGKIYQRAF GGQSLKFGKG GQAHRCCCVA DRTGHSLLHT LYGRSLRYDT ENSBTAP00000054495/1-677 EDGKIYQRAF GGQSLKFGKG GQAHRCCCVA DRTGHSLLHT LYGRSLRYDT BACU014745/1-671 EGGKIYQRAF GGQSLQFGKG GQAHRCCCVA DRTGHSLLHT LYGRSLRYDT ENSTTRP00000005884/1-643 EDGKIYQRAF GGQSLKFGKG GQAHRCCCVT DRTGHSLLHT LYGRSLRYDT 251 300 bmy_05096T0/1-620 SYFVEYFALD LLMENGECRG VIALCIEDGS IHRIRAKNTV VATG-----H ENSP00000264932/1-664 SYFVEYFALD LLMENGECRG VIALCIEDGS IHRIRAKNTV VATGGYGRTY ENSBTAP00000054495/1-677 SYFVEYFALD LLMESGECRG VIALCIEDGS IHRIRARNTV IATGGYGRTY BACU014745/1-671 SYFVEYFALD LLMENGECRG IIALCIEDGS IHRIRAKNTV VATGGYGRTY ENSTTRP00000005884/1-643 SYFVEYFALD LLMENGECRG VIALCIEDGS IHRIRAKNTV VATGGYGRTY 301 350 bmy_05096T0/1-620 IRCWLSHHGR -----VPWRG RHPCQQ---- --SRREVHGA LCSCRKGPRV ENSP00000264932/1-664 FSCTSAHTST GDGTAMITRA GLPCQDLEFV QFHPTGIYGA GCLITEGCRG ENSBTAP00000054495/1-677 FSCTSAHTST GDGTAMVTRA GLPCQDLEFV QFHPTGIYGA GCLITEGCRG BACU014745/1-671 FSCTSAHTST GDGTAMITRA GLPCQDLEFV QFHPTGIYGA GCLITEGCRG ENSTTRP00000005884/1-643 FSCTSAHTST GDGTAMITRA GLPCQDLEFV QFHPTGIYGA GCLITEGCRG 351 400 bmy_05096T0/1-620 QGRRIPLHDP GD-------- ---------- ---------- --PGCGPEKD ENSP00000264932/1-664 EG-GILINSQ GERFMERYAP VAKDLASRDV VSRSMTLEIR EGRGCGPEKD ENSBTAP00000054495/1-677 EG-GILINSQ GERFMERYAP VAKDLASRDV VSRSMTLEIR EGRGCGPEKD BACU014745/1-671 EG-GILVNSQ GE-------- ---------- ---------- --RGCGPEKD ENSTTRP00000005884/1-643 EG-GILINSQ GERFMERYAP VAKDLASRDV VSRSMTLEIR EGRGCGPEKD 401 450 bmy_05096T0/1-620 HVYLQLHHLP PEQLAMRLPG ISETAMIFAG VDVTKEPIPV LPTVHYNMGG ENSP00000264932/1-664 HVYLQLHHLP PEQLATRLPG ISETAMIFAG VDVTKEPIPV LPTVHYNMGG ENSBTAP00000054495/1-677 HVYLQLHHLP PAQLAMRLPG ISETAMIFAG VDVTKEPIPV LPTVHYNMGG BACU014745/1-671 HVYLQLHHLP PEQLAMRLPG ISETAMIFAG VDVTKEPIPV LPTVHYNMGG ENSTTRP00000005884/1-643 HVYLQLHHLP PEQLAMRLPG ISETAMIFAG VDVTKEPIPV LPTVHYNMGG 451 500 bmy_05096T0/1-620 IPTNYKGQVL KHVDGQDQIV PGLYACGEAA CASVHGANRL GANSLLDLVV ENSP00000264932/1-664 IPTNYKGQVL RHVNGQDQIV PGLYACGEAA CASVHGANRL GANSLLDLVV ENSBTAP00000054495/1-677 IPTNYKGQVL RHVNGQDQVV PGLYACGEAA CASVHGANRL GANSLLDLVV BACU014745/1-671 IPTNYKGQVL KHVDGQDQIV PGLYACGEAA CASVHGANRL GANSLLDLVV ENSTTRP00000005884/1-643 IPTNYKGQVL KHVGGQDQVV PGLYACGEAA CASVHGANRL GANSLLDLVV 501 550 bmy_05096T0/1-620 FGRACALSIA ESCRPGDKVP LIKPNAGEES VMNLDKLRFA NGSIRTSELR ENSP00000264932/1-664 FGRACALSIE ESCRPGDKVP PIKPNAGEES VMNLDKLRFA DGSIRTSELR ENSBTAP00000054495/1-677 FGRACALSIA ESCRPGDKVP SIKPNAGEES VMNLDKLRFA NGSIRTSELR BACU014745/1-671 FGRACALSIA ESCRPGDKVP LIKPNAGEES VMNLDKLRFA NGSIRTSELR ENSTTRP00000005884/1-643 FGRACALSIA ESCKPGDKVP LIKPNAGEES VMNLDKLRFA NGSIRTSELR 551 600 bmy_05096T0/1-620 LNMQKSMQSH AAVFRVGSVL REGCEKISQL YGDLKHLKTF DRGMVWNTDL ENSP00000264932/1-664 LSMQKSMQNH AAVFRVGSVL QEGCGKISKL YGDLKHLKTF DRGMVWNTDL ENSBTAP00000054495/1-677 LNMQKSMQSH AAVFRVGSVL QEGCEKISSL YGDLRHLKTF DRGMVWNTDL BACU014745/1-671 LNMQKSMQSH AAVFRVGSVL QEGCEKISQL YGDLKHLKTF DRGMVWNTDL ENSTTRP00000005884/1-643 LNMQKSMQSH AAVFRVGSVL QEGCEKISKL YGDLKHLKTF DRGMVWNTDL 601 650 bmy_05096T0/1-620 VETLELQNLM LCALQTIYGA EARKESRGAH AREDFKERVD EYDYSRPIQG ENSP00000264932/1-664 VETLELQNLM LCALQTIYGA EARKESRGAH AREDYKVRID EYDYSKPIQG ENSBTAP00000054495/1-677 VETLELQNLM LCALQTIYGA EARKESRGAH AREDFKERVD EYDYSKPIQG BACU014745/1-671 VETLELQNLM LCALQTIYGA EARKESRGAH AREDFKERVD EYDYAKPIQG ENSTTRP00000005884/1-643 VETLELQNLM LCALQTIYGA EARKESRGAH AREDFKERVD EYDYSKPIQG 651 700 bmy_05096T0/1-620 QHKKPLEEHW RKHTLSCVDV TTGKVSLEYR PVIDRTLNEA DCATVPPAIR ENSP00000264932/1-664 QQKKPFEEHW RKHTLSYVDV GTGKVTLEYR PVIDKTLNEA DCATVPPAIR ENSBTAP00000054495/1-677 QQKKPFEQHW RKHTLSYVDI KTGKVTLEYR PVIDRTLNET DCATVPPAIR BACU014745/1-671 QHKKPFEEHW RKHTLSCVDV TTGKVSLEYR PVIDRTLNEA DCATVPPAIR ENSTTRP00000005884/1-643 QHKRPFEGHW RKHTLSYVDI RTGKVSLEYR PVIDRTLNEA DCATVPPAIR 701 750 bmy_05096T0/1-620 SY ENSP00000264932/1-664 SY ENSBTAP00000054495/1-677 SY BACU014745/1-671 SY ENSTTRP00000005884/1-643 SY