KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 4 Type: P Thu May 15 18:24:16 2014 Check: 00 .. Name: ENSP00000246841/1-674 Len: 677 Check: 7170 Weight: 1.00 Name: ENSBTAP00000054502/1-677 Len: 677 Check: 3943 Weight: 1.00 Name: bmy_10861T0/1-674 Len: 677 Check: 9015 Weight: 1.00 Name: BACU005339/1-674 Len: 677 Check: 9316 Weight: 1.00 // 1 50 ENSP00000246841/1-674 MVVAHPTATA TTT--PTATV TATVVMTTAT MDLRDWLFLC YGLIAFLTEV ENSBTAP00000054502/1-677 MVVAHPTAAA ATTATPATTV TATVVMTTAT MDLRDWLFLC YGLIAFLTEV bmy_10861T0/1-674 MVVAHPTATA TTT--PTATV TATVVMTTAT MDLRDWLFLC YGLIAFLTEV BACU005339/1-674 MVVANPTATA TTT--PTATV TATVVMTTAT MDLRDWLFLC YGLIAFLTEV 51 100 ENSP00000246841/1-674 IDSTTCPSVC RCDNGFIYCN DRGLTSIPAD IPDDATTLYL QNNQINNAGI ENSBTAP00000054502/1-677 IDSTTCPSVC RCDNGFIYCN DRGLTSIPAD IPDDATTLYL QNNQINNAGI bmy_10861T0/1-674 IDSTTCPSVC RCDNGFIYCN DRGLTSIPAD IPDDATTLYL QNNQINNAGI BACU005339/1-674 IDSTTCPSVC RCDNGFIYCN DRGLTSIPAD IPDDATTLYL QNNQINNAGI 101 150 ENSP00000246841/1-674 PQDLKTKVNV QVIYLYENDL DEFPINLPRS LRELHLQDNN VRTIARDSLA ENSBTAP00000054502/1-677 PQDLKTKVNV QVIYLYENDL DEFPVNLPRS LRELHLQDNN VRTIARDSLA bmy_10861T0/1-674 PQDLKTKVNV QVIYLYENDL DEFPVNLPRS LRELHLQDNN VRTIARDSLA BACU005339/1-674 PQDLKTKVNV QVIYLYENDL DEFPVNLPRS LRELHLQDNN VRTIARDSLA 151 200 ENSP00000246841/1-674 RIPLLEKLHL DDNSVSTVSI EEDAFADSKQ LKLLFLSRNH LSSIPSGLPH ENSBTAP00000054502/1-677 RIPLLEKLHL DDNSVSTVSI EEDAFADSKQ LKLLFLSRNH LSSIPSGLPR bmy_10861T0/1-674 RIPLLEKLHL DDNSVSTVSI EEDAFADSKQ LKLLFLSRNH LSSIPSGLPR BACU005339/1-674 RIPLLEKLHL DDNSVSTVSI EEDAFADSKQ LKLLFLSRNH LSSIPSGLPR 201 250 ENSP00000246841/1-674 TLEELRLDDN RISTIPLHAF KGLNSLRRLV LDGNLLANQR IADDTFSRLQ ENSBTAP00000054502/1-677 TLEELRLDDN RISTIPLHAF KGLSSLRRLV LDGNLLANQR IADDTFSRLQ bmy_10861T0/1-674 TLEELRLDDN RISTIPLHAF KGLSSLRRLV LDGNLLANQR IADDTFSRLQ BACU005339/1-674 TLEELRLDDN RISTIPLHAF KGLSSLRRLV LDGNLLANQR IADDTFSRLQ 251 300 ENSP00000246841/1-674 NLTELSLVRN SLAAPPLNLP SAHLQKLYLQ DNAISHIPYN TLAKMRELER ENSBTAP00000054502/1-677 NLTELSLVRN SLAAPPLNLP SARLQKLYLQ DNAISHVPYN TLAKMRELER bmy_10861T0/1-674 NLTELSLVRN SLAAPPLNLP SARLQKLYLQ DNAISHVPYN TLAKMRELER BACU005339/1-674 NLTELSLVRN SLAAPPLNLP SARLQKLYLQ DNAISHVPYN TLAKMRELER 301 350 ENSP00000246841/1-674 LDLSNNNLTT LPRGLFDDLG NLAQLLLRNN PWFCGCNLMW LRDWVKARAA ENSBTAP00000054502/1-677 LDLSNNNLTT LPRGLFDDLE NLAQLLLRNN PWFCGCNLLW LRDWVKARAA bmy_10861T0/1-674 LDLSNNNLTT LPRGLFDDLQ NLAQLLLRNN PWFCGCNLLW LRDWVKARAA BACU005339/1-674 LDLSNNNLTT LPRGLFDDLQ NLAQLLLRNN PWFCGCNLLW LRDWVKARAA 351 400 ENSP00000246841/1-674 VVNVRGLMCQ GPEKVRGMAI KDITSEMDEC FETGPQGGVA NAAAKTT-AS ENSBTAP00000054502/1-677 VVNVRGLMCQ GPEKVRGMAI KDITSEMDEC FEAGAQGGAV NAAAKTTHAS bmy_10861T0/1-674 VVNVRGLMCQ GPEKVRGMAI KDITSEMDEC FEAGVQGGAA NAAAKTT-AS BACU005339/1-674 VVNVRGLMCQ GPEKVRGMAI KDITSEMDEC FGAGVQGGAA NAAAKTT-AS 401 450 ENSP00000246841/1-674 NHASATTPQG SLFTLKAKRP GLRLPDSNID YPMATGDGAK TLAIHVKALT ENSBTAP00000054502/1-677 DHASVTTPQG SLFTLKAKRP GLRLPDSSLD YPMATGDSAK TLAIHVKPLT bmy_10861T0/1-674 DRASATTPQG SLFTLKAKRP GLRLPDSSLD YPMATGDSAK TLVIHVKPLT BACU005339/1-674 DRASATTPQG SLFTLKAKRP GLRLPDSSLD YPMATGDSAK TLVIHVKPLT 451 500 ENSP00000246841/1-674 ADSIRITWKA TLPASSFRLS WLRLGHSPAV GSITETLVQG DKTEYLLTAL ENSBTAP00000054502/1-677 ADSIRITWKA TLPASSFRLS WLRLGHSPAV GSITETLVQG DKTEYLLTAL bmy_10861T0/1-674 ADSIRITWKA TLPASSFRLS WLRLGHSPAV GSITETLVQG DKTEYLLTAL BACU005339/1-674 ADSIRITWKA TLPASSFRLS WLRLGHSPAV GSITETLVQG DKTEYLLTAL 501 550 ENSP00000246841/1-674 EPKSTYIICM VTMETSNAYV ADETPVCAKA ETADSYGPTT TLNQEQNAGP ENSBTAP00000054502/1-677 EPKSTYIICM VTMDTGNTYV ADETPVCAKA ETADSSGPAT TLNQEQNADP bmy_10861T0/1-674 EPKSTYIICM VTMETGNTYV ADETPVCAKA ETADSYGPTT TLNQEQNADP BACU005339/1-674 EPKSTYIICM VTMETGNTYV ADETPVCAKA ETADSYGPTT TLNQEQNANP 551 600 ENSP00000246841/1-674 MASLPLAGII GGAVALVFLF LVLGAICWYV HQAGELLTRE RAYNRGSRKK ENSBTAP00000054502/1-677 MAGLPLAGII GGAVALVFLF LVLGAICWYV HRASELLTRE RAYNRGSRKK bmy_10861T0/1-674 MAGLPLAGII GGAVALVFLF LVLGAICWYV HRASELLTRE RAYNRGNRKK BACU005339/1-674 MAGLPLAGII SGAVALVFLF LVLGAICWYV HRASELLTRE RAYNRGNRKK 601 650 ENSP00000246841/1-674 DDYMESGTKK DNSILEIRGP GLQMLPINPY RAKEEYVVHT IFPSNGSSLC ENSBTAP00000054502/1-677 DDYLESGTKK DNSILEIRGP GLQMLPINPY RAKEEYVVHT IFPSNGSSLC bmy_10861T0/1-674 DDYMESGTKK DNSILEIRGP GLQMLPINPY HSKEEYVVHT IFPSNGSSLC BACU005339/1-674 DDYMESGTKK DNSILEICGP GLQMLPINPY HSKEEYVVHT IFPSNGSSLC 651 700 ENSP00000246841/1-674 KATHTIGYGT TRGYRDGGIP DIDYSYT ENSBTAP00000054502/1-677 KGTHTIGYGT TRGYRDGGIP DIDYSYT bmy_10861T0/1-674 KGTHTIGYGT TRGYRDGGIP DIDYSYT BACU005339/1-674 KGTHTIGYGT TRGYRDGGIP DIDYSYT