KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 4 Type: P Thu May 15 18:24:17 2014 Check: 00 .. Name: bmy_12825T0/1-117 Len: 200 Check: 2866 Weight: 1.00 Name: ENSTTRP00000013208/1-200 Len: 200 Check: 875 Weight: 1.00 Name: ENSP00000361458/1-200 Len: 200 Check: 2405 Weight: 1.00 Name: ENSBTAP00000054509/1-178 Len: 200 Check: 1060 Weight: 1.00 // 1 50 bmy_12825T0/1-117 MAQPKPDCRS PVGLDCCNCC LDLAHRSGLQ RDSSGDNNNP GRPTVSNFRQ ENSTTRP00000013208/1-200 MAQSKPDCRS PVGLDCCNCC LALAHRSGLQ RDSSGANNNP GSPTVSNFRQ ENSP00000361458/1-200 MAQSKLDCRS PVGLDCCNCC LDLAHRSGLQ RGSSGENNNP GSPTVSNFRQ ENSBTAP00000054509/1-178 MAQPKSDCRS PVGLDCCNCC LDLAHRSGLQ RDNGGDNNNS GSPTVSNFRQ 51 100 bmy_12825T0/1-117 LQEKLIFENL NTDKLNSIMR QDSLEPVLRD PCYLINEGIC NRNIDQTMLS ENSTTRP00000013208/1-200 LQEKLIFENL NTDKLNSIMR QDSLEPVLRD PCYLINEGIC NRNIDQTMLS ENSP00000361458/1-200 LQEKLVFENL NTDKLNSIMR QDSLEPVLRD PCYLINEGIC NRNIDQTMLS ENSBTAP00000054509/1-178 LQEKLVFENL NTDKLNSIMR QDSLEPVLRD PCYLINEGIC NRNIDQTMLS 101 150 bmy_12825T0/1-117 ILLFFHSTG- ---------- ---------- ---------- ---------- ENSTTRP00000013208/1-200 ILLFFHSASG ASVVALDNKI EQAMDLVKNH LMYAVREEVE ILKEQIRELV ENSP00000361458/1-200 ILLFFHSASG ASVVAIDNKI EQAMDLVKNH LMYAVREEVE ILKEQIRELV ENSBTAP00000054509/1-178 ILLFFHSASG ASVVAIDNKI EQAMDLVKNH LMYAVREEVE ILKEQIRELV 151 200 bmy_12825T0/1-117 ---------- ----SLKLPP AA-------- ---------- ---------- ENSTTRP00000013208/1-200 EKNSQLEREN TLLKTLASPE QLEKFQSRLS PEEPAPETPE APEAPGGSAV ENSP00000361458/1-200 EKNSQLEREN TLLKTLASPE QLEKFQSCLS PEEPAPESPQ VPEAPGGSAV ENSBTAP00000054509/1-178 EKNSQLEREN TLLKTLASPE QLEKFQSR-- ---------- ----------