KEY:
    ENSP* - Homo sapiens (Human)
    ENSBTA* - Bos taurus (Cow)
    ENSTTR* - Tursiops truncatus (Dolphin)
    bmy_* - Balaena mysticetus (Bowhead whale)
    BACU* - Balaenoptera acutorostrata (Minke whale)

Copy from below the line for a valid .msf file.

----------------------------------------------------------------------------------
                
NoName   MSF: 4  Type: P  Thu May 15 18:24:23 2014  Check: 00 ..

 Name: bmy_16245T0/1-146         Len:    279  Check:  1278  Weight:  1.00
 Name: ENSBTAP00000054546/1-213  Len:    279  Check:  2070  Weight:  1.00
 Name: ENSP00000426174/1-241     Len:    279  Check:  2378  Weight:  1.00
 Name: BACU015761/1-207          Len:    279  Check:  2518  Weight:  1.00

//


                          1                                                   50
bmy_16245T0/1-146         ---------- ---------- ---------- ---------- ---------- 
ENSBTAP00000054546/1-213  MGDRGGDRFE GMSTDCLKLE LLEEIHMKDL VQISILELRQ KIVELEDKLN 
ENSP00000426174/1-241     MKEERNYNFD GVSTNRLKQQ LLEEVRKKDA VQLSIFELRH KITELEAKLN 
BACU015761/1-207          ---------- -MSTDRLKLE FLEERHLKDI VQLSVLEIRH KIAELEAILN 


                          51                                                 100
bmy_16245T0/1-146         ---------- ---------- ---------- ---------- -MKKRQEKQN 
ENSBTAP00000054546/1-213  SNYE------ ---------- ---------- --------GS EWKARYEAQL 
ENSP00000426174/1-241     TDNE------ ---------- ---------- --------GS EWKTRYETQL 
BACU015761/1-207          SDDEEQSVAG KVKLSVVLFQ KKKTVDSRKL TKFVGVNAGG EWKTRYETQL 


                          101                                                150
bmy_16245T0/1-146         LYKKSMDQIM LKLMFPVQ-- ---PNQRLSS TRVYERMPVE SLSTLLKQLA 
ENSBTAP00000054546/1-213  ELNDHLQKQI ASLREKVEKI RGNPSDRLSS IRVYERMSVE SLSTLLKQLE 
ENSP00000426174/1-241     ELNDELEKQI VYLKEKVEKI HGNSSDRLSS IRVYERMPVE SLNTLLKQLE 
BACU015761/1-207          ELNDQLEKQI VSLKEKMEKI HGNPSDRLSS ICVYEQLPVE ALNTLLKQLE 


                          151                                                200
bmy_16245T0/1-146         KEKRSLENQV KDYVLRLERE SK-AYHKIND ERRIYLVKMS QASGSHQVSK 
ENSBTAP00000054546/1-213  KEKRRLESQV RECALRLERE SK-AYRKVKD EHRMYLAKMS QLSDSPQSSK 
ENSP00000426174/1-241     EEKKTLESQV KYYALKLEQE SK-AYQKINN ERRTYLAEMS QGSGLHQVSK 
BACU015761/1-207          KEKRSLENRV KDSALRLEQE SKVCFYSI-- ---------- ---------- 


                          201                                                250
bmy_16245T0/1-146         RQPMNQLRRM KEN------- -----PVKTE RYSPA----- ---------- 
ENSBTAP00000054546/1-213  GQPVN-LHRM KED------- -----PVKIG RSNPA----- ---------- 
ENSP00000426174/1-241     RQQVDQLPRM QENLVKTLLL KEELDPLKVS CLETLGFSAA GVAGPENRTC 
BACU015761/1-207          ------LRR- ---------- -----PFGTA MIFSM----- ---------- 


                          251                                                300
bmy_16245T0/1-146         -NQKMENKT- ------WFIV AEFEKSML- 
ENSBTAP00000054546/1-213  -NQKMVNAK- -RGPEKKITR SNHLPKLNP 
ENSP00000426174/1-241     LGQKALWPAC LHGSSTLAVC QTHLKS--- 
BACU015761/1-207          LSTNLLYNS- -HNILTKVFC TPLEKSIAT