KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 18:24:23 2014 Check: 00 .. Name: ENSP00000383938/1-402 Len: 610 Check: 7771 Weight: 1.00 Name: ENSBTAP00000054551/1-351 Len: 610 Check: 5351 Weight: 1.00 Name: BACU013499/1-514 Len: 610 Check: 635 Weight: 1.00 Name: bmy_22396T0/1-359 Len: 610 Check: 5871 Weight: 1.00 Name: ENSTTRP00000005269/1-381 Len: 610 Check: 7284 Weight: 1.00 // 1 50 ENSP00000383938/1-402 ---------- ---------- ---------- ---------- ----MRLPRR ENSBTAP00000054551/1-351 ---------- ---------- ---------- ---------- ----MRPPAP BACU013499/1-514 ---------- ---------- ---------- ---------- ----MRPPAP bmy_22396T0/1-359 VAPGTAGASE PVGGRRPERS AGSRWTSASA RAAAFPQRCP RRPAMRPPAP ENSTTRP00000005269/1-381 ---------- ---------- ---------- ---------- ----MRPPAP 51 100 ENSP00000383938/1-402 AALGLLPLLL LLPPAPEAAK KPTPCHRCRG LVDKFNQGMV DTAKKNFGGG ENSBTAP00000054551/1-351 AVLGLL-LL- LLPTG-EATK KPTPCKRCRE LVDKFNQGMV DTAKKNFGGG BACU013499/1-514 AVLGLL-LLM LLSPG-EATK KPTPCKRCRE LVDKFNQGMV DTAKKNFGGG bmy_22396T0/1-359 AVLGLL-LLM LLSPG-EATK KPTPCKRCRE LVDKFNQGMV DTAKKNFGGG ENSTTRP00000005269/1-381 AVLGLL-LLT LLSPG-EATK KPTPCKRCRE LVDKFNQGMV DTAKKNFGGG 101 150 ENSP00000383938/1-402 NTAWEEKTLS KYESSEIRLL EILEGLCESS DFECNQMLEA QEEHLEAWWL ENSBTAP00000054551/1-351 NTAWEEKTLS KYEFSEVRLL EIVEGLCEAS DFECNQLLEE QEELLEAWWL BACU013499/1-514 NTAWEEKTLS KYEFSEVRLL EIMEGLCGTS DFECNQLLEE HEGLLETWWL bmy_22396T0/1-359 NTAWEEKTLS KYEFR----- ---------- ---------- ---------- ENSTTRP00000005269/1-381 NTAWEEKTLS KYEFSEVRLL EIMEGLCGTS DFECNQLLEE HEGLLETWWL 151 200 ENSP00000383938/1-402 QLKSEYPDLF EWFCVKTLKV CCSPGTYGPD CLACQGGSQR PCSGNGHCSG ENSBTAP00000054551/1-351 RLKKKHPDLF EWFCVQTLKA CCSPGTYGPD CLACQGGSER PCSGNGHCVG BACU013499/1-514 RLKKKYPDLF EWFCVKTLKV CCAPGTYGPD CLACQGGSER PCSGNGHCTG bmy_22396T0/1-359 --KNKYPALF EWFCVKTLKA CCAPGTYGPD CLACQGGSER PCSGNGQCSG ENSTTRP00000005269/1-381 RLKKKYPDLF EWFCVKTLKV CCAPGTYGPD CLACQGGSER PCSGNGHCSG 201 250 ENSP00000383938/1-402 DGSRQGDGSC RCHMGYQGPL CTDCMDGYFS SLRNETHSIC TVRTGLSDSY ENSBTAP00000054551/1-351 DGTREGDGSC QCHLGYQGPL CSDCMDGYFR SPTSETHSIC ---------- BACU013499/1-514 DGSRQGDGSC QCHPGYRGPL CADCMDGYFN SLRNETHSIC ---------- bmy_22396T0/1-359 DGSRQGDGSC QCHPGYRGPL CADCMDGYFN SLRNETHSTC ---------- ENSTTRP00000005269/1-381 DGSRQGDGSC QCHLGYRGPL CADCMDGYFN SLRNETHSIC ---------- 251 300 ENSP00000383938/1-402 PPCCLSLGCW RGVGHAWIRG RNTHTQPGYS SRVWIAAFSP ACDESCKTCS ENSBTAP00000054551/1-351 ---------- ---------- ---------- ---------S ACDEACKTCV BACU013499/1-514 ---------- ---------- ---------- ---------S ACDESCKTCA bmy_22396T0/1-359 ---------- ---------- ---------- ---------S ACDESCKTCT ENSTTRP00000005269/1-381 --------SG LSRAERHAGG RHAHTQLGVG SSIWEAT--S ACDESCKTCT 301 350 ENSP00000383938/1-402 GLTNRDCGEC EVGWVLDEGA CVDVDECAAE PPPCSAAQFC KNANGSYTCE ENSBTAP00000054551/1-351 GPTNRDCGQC EVGWVRQDDA CVDVDECAAE PPPCEDTQYC ENVNGSFVCE BACU013499/1-514 GPTNRDCGQC EAGWAREGDA CVDVDECAVE PPPCEDQQYC ENVNGSFVCQ bmy_22396T0/1-359 GPTNRDCGQC EVGWAREDDA CVDVDECALE PPPCKDQQYC ENVNGSFVCQ ENSTTRP00000005269/1-381 GPTNRDCGQC EVGWAREDDT CVDVDECAEE PAPCEEQQYC ENLNGSFVCQ 351 400 ENSP00000383938/1-402 ECDSSCVGCT GEGPGNCKEC ISGYAREHGQ CADVDECSLA EKTCVRKNEN ENSBTAP00000054551/1-351 ECDPTCMGCT GKGPTQCREC IAGYSKESGQ CEDIDECSLA EKPCLRDNEN BACU013499/1-514 ECDSTCVGCT GKGPGQCKEC IPGYSKESGQ CADVDECSLA EKPCLRRNEN bmy_22396T0/1-359 ECDSTCVGCT GKGPGQCKEC IPGYSKESGQ CADIDECSLA EKPCLRRNEN ENSTTRP00000005269/1-381 ECDSTCVGCT GKGPGQCKEC LPGYSKESGQ CADIDECSLA EKPCLRRNEN 401 450 ENSP00000383938/1-402 CYNTPGSYVC VCPDGFEETE DACVP--PAE AEATEGESPT ---------- ENSBTAP00000054551/1-351 CYNTPGSFVC VCPDGFEEAE DTCVQTRPAG AEATE-ASPT ---------- BACU013499/1-514 CYNTPGSFVC VCPEGFEEAE GVCVQTGPAG AGTCP-EAPH PEQSPWSGSR bmy_22396T0/1-359 CYNTPGSFVC VCPEGFEEAE DICVQTGPAG AEATE-ASPT ---------- ENSTTRP00000005269/1-381 CYNTPGSFVC VCPEGFEEAE DICVQTGPAG AEVTE-ASPT ---------- 451 500 ENSP00000383938/1-402 ---------- ---------- ---------- ---------- ----QLP--- ENSBTAP00000054551/1-351 ---------- ---------- ---------- ---------- ----QPP--- BACU013499/1-514 LGAGGEHENL LVDLRSGELK LIDFGSGALL RDTVYTDFDG TRVYSPPEWI bmy_22396T0/1-359 ---------- ---------- ---------- ---------- ----QPP--- ENSTTRP00000005269/1-381 ---------- ---------- ---------- ---------- ----QPP--- 501 550 ENSP00000383938/1-402 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000054551/1-351 ---------- ---------- ---------- ---------- ---------- BACU013499/1-514 RYHRYHGRSA TVWSLGVLLY DMVCGDIPFE QDEEILRGRL FFRRRVSPEC bmy_22396T0/1-359 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000005269/1-381 ---------- ---------- ---------- ---------- ---------- 551 600 ENSP00000383938/1-402 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000054551/1-351 ---------- ---------- ---------- ---------- ---------- BACU013499/1-514 QQLIQWCLSL RPSERPSLDQ ISAHPWMMVA EGGTPESCDL RLCALDTDDG bmy_22396T0/1-359 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000005269/1-381 ---------- ---------- ---------- ---------- ---------- 601 650 ENSP00000383938/1-402 -----SREDL ENSBTAP00000054551/1-351 -----SREDL BACU013499/1-514 ASTTSSSESL bmy_22396T0/1-359 -----SHEDL ENSTTRP00000005269/1-381 -----SREDL