KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 4 Type: P Thu May 15 18:24:24 2014 Check: 00 .. Name: ENSTTRP00000005605/1-642 Len: 791 Check: 9913 Weight: 1.00 Name: bmy_04388T0/1-791 Len: 791 Check: 7791 Weight: 1.00 Name: ENSBTAP00000054567/1-642 Len: 791 Check: 7578 Weight: 1.00 Name: BACU001528/1-374 Len: 791 Check: 8397 Weight: 1.00 // 1 50 ENSTTRP00000005605/1-642 ---------- ---------- ---------- ---------- ---------- bmy_04388T0/1-791 LRLQRRCASE RASESPRISG ALPFLAASAG CPLVSPLGRS LLGGLEALSV ENSBTAP00000054567/1-642 ---------- ---------- ---------- ---------- ---------- BACU001528/1-374 ---------- ---------- ---------- ---------- ---------- 51 100 ENSTTRP00000005605/1-642 ---------- ---------- ---------- ---------- ---------- bmy_04388T0/1-791 GPIPARFLLL PFEAPEMSFS ISSEMNQKKF VSIALKDLIT SFSSLIVLES ENSBTAP00000054567/1-642 ---------- ---------- ---------- ---------- ---------- BACU001528/1-374 ---------- ---------- ---------- ---------- ---------- 101 150 ENSTTRP00000005605/1-642 ---------- ---------- ---------- ---------- ---------M bmy_04388T0/1-791 PLELQTPLPS LQPPVFIPQR SAEFPLSLNY LKHPGNTFLT SIVAKFQGKM ENSBTAP00000054567/1-642 ---------- ---------- ---------- ---------- ---------M BACU001528/1-374 ---------- ---------- ---------- ---------- ---------M 151 200 ENSTTRP00000005605/1-642 IPNGYLMFED ENFIESSVAK LNALRKSGQF CDVRLQVCGH EMLAHRAVLA bmy_04388T0/1-791 IPNGYLMFED ENFIESSVAK LNALRKSGQF CDVRLQVCGH EMLAHRAVLA ENSBTAP00000054567/1-642 IPNGYLMFED ENFIESSVAK LNALRKSGQF CDVRLQVCGH EMLAHRAVLA BACU001528/1-374 IPNGYLMFED ENFIESSVAK LNALRKSGQF CDVRLQVCGH EMLAHRAVLA 201 250 ENSTTRP00000005605/1-642 CCSPYLFEIF NNDSDPHRVS HVKFDDLNPE AVEVLLNYAY TAQLKADKEL bmy_04388T0/1-791 CCSPYLFEIF NNDSDPHRVS HVKFDDLNPE AVEVLLNYAY TAQLKADKEL ENSBTAP00000054567/1-642 CCSPYLFEIF NSDSDPHRVS HVKFDDLNPE AVEVLLNYAY TAQLKADKEL BACU001528/1-374 CCSPYLFEIF NNDSDPHRVS HVKFDDLNPE AVEVLLNYAY TAQLKADKEL 251 300 ENSTTRP00000005605/1-642 VKDVYSAAKK LKMDRVKQVC GDYLLSRMDI TSCISYRNFA SCMGDSRLLN bmy_04388T0/1-791 VKDVYSAAKK LKMDRVKQVC GDYLLSRMDV TSCISYRNFA SCMGDSRLLN ENSBTAP00000054567/1-642 VKDVYSAAKK LKMDRVKQVC GDYLLSRMDV TSCISYRNFA SCMGDSRLLN BACU001528/1-374 VKDVYSAAKK LKMDRVKQVC GDYLLSRMDV TSCISYRNFA SCMGDSRLLN 301 350 ENSTTRP00000005605/1-642 KVDAYIQEHL LQISEEEEFL KLPRLKXXXX XXXXXXXXXX XXXXXXXXXX bmy_04388T0/1-791 KVDAYIQEHL LQISEEEEFL KLPRLKLEVM LEDNVCLPSN GKLYTKVINW ENSBTAP00000054567/1-642 KVDAYIQEHL LQISEEEEFL KLPRLKLEVM LEDTVCLPSN GKLYTKVINW BACU001528/1-374 KVDAYIQEHL LQISEEEEFL KLPRLKLEVM LEDNVCLPSN GKLYTKVINW 351 400 ENSTTRP00000005605/1-642 XXXXXXXXXX XXXXXXXXVQ TLYYSADHKL LDGNLLAGQA EVFGSDDDHI bmy_04388T0/1-791 VQRSIWENGD SLEELMEEVQ TLYYSADHKL LDGNLLDGQA EVFGSDDDHI ENSBTAP00000054567/1-642 VQRSIWENGD SLEELMEEVQ TLYYSADHKL LDGNLLDGQA EVFGSDDDHI BACU001528/1-374 VQRSIWENGD SLEELMEEVQ TLYYSADHKL LDGNLLDGQA EVFGSDDDHI 401 450 ENSTTRP00000005605/1-642 QFVQKKPPRE NGHKQISSSS IGCLSSPNAT IQSPKHEWKI VASEKTSNNT bmy_04388T0/1-791 QFVQKKPPRE NGHKQISSSS XGCLPSPNAT IQSPKHEWKI VASEKTSNNT ENSBTAP00000054567/1-642 QFVQKKPPRE NGHKQISSSS IGCLSSPNAT IQSPKHEWKI VASEKTSNNT BACU001528/1-374 QFVQKKPPRE NGHKQISSSS IGCLSSPNAT IQSPKHEWKI VASEKTSNNT 451 500 ENSTTRP00000005605/1-642 YLCLAVLDGI FCVIFLHGRN SPQSSPTSTP KLIKSLSFEM QPDELIEKPM bmy_04388T0/1-791 YLCLAVLDGI FCVIFLHGRN SPQSSPTSTP KLIKSLSFEM QPDELIEKPM ENSBTAP00000054567/1-642 YLCLAVLDGI FCVIFLHGRN SPQSSPTSTP KLIKSLSFEM HPDELIEKPM BACU001528/1-374 YLCLAVLDGI FCVIFLHGRN SPQSSPTSTP KLIKSLSFEM QPDELIEKPM 501 550 ENSTTRP00000005605/1-642 SPMQYARSGL GTAEMNGKLI AAGGYNREEC LRTVECYDPH TDHWSFLAPM bmy_04388T0/1-791 SPMQYARSGL GTAEMNGKLI AAGGYNREEC LRTVECYDPH TDHWSFLAPM ENSBTAP00000054567/1-642 SPMQYARSGL GTAEMNGKLI AAGGYNREEC LRTVECYDPH TDHWSFLAPM BACU001528/1-374 SPMQYARSGL GTAEMNGKLI AAE------- ---------- ---------- 551 600 ENSTTRP00000005605/1-642 RTPRARFQMA VLMGQLYVVG GSNGHSDDLR CGEMYDPNID DWTPIPELRT bmy_04388T0/1-791 RTPRARFQMA VLMGQLYVVG GSNGHSDDLR CGEVYDPNID DWTPIPELRT ENSBTAP00000054567/1-642 RTPRARFQMA VLMGQLYVVG GSNGHSDDLS CGEMYDPNMD DWTPVPELRT BACU001528/1-374 ---------- ---------- ---------- ---------- ---------- 601 650 ENSTTRP00000005605/1-642 NRCNAGVCAL NGKLYIVGGS DPYGQKGLKN CDVFDPITKS WTSCAPLNIR bmy_04388T0/1-791 NRCNAGVCAL NGKLYIVGGS DPYGQKGLKN CDVFDPITKS WTSCAPLNIR ENSBTAP00000054567/1-642 NRCNAGVCAL NGKLYIVGGS DPYGQKGLKN CDVFDPVTKS WTSCAPLNIR BACU001528/1-374 ---------- ---------- ---------- ---------- ---------- 651 700 ENSTTRP00000005605/1-642 RHQSAVCELG GYLYIIGGAE SWNCLNTVER YNPENNTWTL IASMNVARRG bmy_04388T0/1-791 RHQSAVCELG GYLYIIGGAE SWNCLNTVER YNPENNTWTL IASMNVARRG ENSBTAP00000054567/1-642 RHQSAVCELG GYLYIIGGAE SWNCLNTVER YNPENNTWTL IASMNVARRG BACU001528/1-374 ---------- ---------- ---------- ---------- ---------- 701 750 ENSTTRP00000005605/1-642 AGVAVLGGKL FVGGGFDGSH AISCVEMYDP TRNEWKMMGN MTSPRSNAGI bmy_04388T0/1-791 AGVAVLGGKL FVGGGFDGSH AISCVEMYDP TRNEWKMMGN MTSPRSNAGI ENSBTAP00000054567/1-642 AGVAVLDGKL FVGGGFDGSH AISCVEMYDP TRNEWKMMGN MTSPRSNAGI BACU001528/1-374 ---------- ---------- ---------- ---------- ---------- 751 800 ENSTTRP00000005605/1-642 ATVGNTIYAV GGFDGNEFLN TVEVYNLESN EWSPYTKIFQ F bmy_04388T0/1-791 TTVGNTIYAV GGFDGNEFLN TVEVYNLESN EWSPYTKIFQ F ENSBTAP00000054567/1-642 TTVGNTIFAV GGFDGNEFLN TVEVYNLESN EWSPYTKIFQ F BACU001528/1-374 ---------- ---------- ---------- ---------- -