KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 4 Type: P Thu May 15 18:24:30 2014 Check: 00 .. Name: ENSTTRP00000013748/1-482 Len: 586 Check: 2373 Weight: 1.00 Name: ENSBTAP00000054651/1-467 Len: 586 Check: 1518 Weight: 1.00 Name: bmy_22049T0/1-500 Len: 586 Check: 9186 Weight: 1.00 Name: ENSP00000242728/1-482 Len: 586 Check: 1984 Weight: 1.00 // 1 50 ENSTTRP00000013748/1-482 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000054651/1-467 ---------- ---------- ---------- ---------- ---------- bmy_22049T0/1-500 VWPATRVPCG QTLPGVRANY QRSGAGASVR ACVCVCVRES EHGGRRGPTA ENSP00000242728/1-482 ---------- ---------- ---------- ---------- ---------- 51 100 ENSTTRP00000013748/1-482 ---------- ---------- ---------- ---------- --------MD ENSBTAP00000054651/1-467 ---------- ---------- ---------- ---------- --------MD bmy_22049T0/1-500 SHFQHCTEEG ERETGDVQIP PRSPKATVPQ IIEQNPKNRN RGNGQRWNMD ENSP00000242728/1-482 ---------- ---------- ---------- ---------- --------MD 101 150 ENSTTRP00000013748/1-482 EGIPHLQERQ LLEHRDFIGL DYPSLYMCKP KRSMKRDDSK DTYKLPHRLI ENSBTAP00000054651/1-467 EGIPHLQERQ LLEHRDFIGL DYPSLYMCKP KRSMKRDDSK DTYKLPHRLI bmy_22049T0/1-500 EGIPHLQERQ LLEHRDFIGL DYPSLYMCKP KRSMKRDDSK DTYKLPHRLI ENSP00000242728/1-482 EGIPHLQERQ LLEHRDFIGL DYSSLYMCKP KRSMKRDDTK DTYKLPHRLI 151 200 ENSTTRP00000013748/1-482 EKKRRDRINE CIAQLKDLLP EHLKLTTLGH LEKAVVLELT LKHLKALTAL ENSBTAP00000054651/1-467 EKKRRDRINE CIAQLKDLLP EHLKLTTLGH LEKAVVLELT LKHLKALTAL bmy_22049T0/1-500 EKKRRDRINE CIAQLKDLLP EHLKLTTLGH LEKAVVLELT LKHLKALTAL ENSP00000242728/1-482 EKKRRDRINE CIAQLKDLLP EHLKLTTLGH LEKAVVLELT LKHLKALTAL 201 250 ENSTTRP00000013748/1-482 TEQQHQKIIA LQNGERSLKS PIQSDLDAFH SGFQTCAKEV LQYLARFESW ENSBTAP00000054651/1-467 TEQQHQKIIA LQNGERSLKS PIQSDLDAFH SGFQTCAKEV LQYLARFESW bmy_22049T0/1-500 TEQQHHKIIA LQNGERSLKS PIQSDLDAFH SGFQTCAKEV LQYLARFESW ENSP00000242728/1-482 TEQQHQKIIA LQNGERSLKS PIQSDLDAFH SGFQTCAKEV LQYLSRFESW 251 300 ENSTTRP00000013748/1-482 TPREPRCVQL INHLHAVTTQ FLPTPQLLTQ QVPLSKGTGV PXXXXXXXXX ENSBTAP00000054651/1-467 TPREPRCVQL INHLHAVATQ FLPTPQLLTQ QVPLSKGTGA PTAAAPACSG bmy_22049T0/1-500 TPREPRCVQL INHLHAVATQ FLPTPQLLTQ QVPLSKGTGV PSAAAPAGSG ENSP00000242728/1-482 TPREPRCVQL INHLHAVATQ FLPTPQLLTQ QVPLSKGTGA PSA---AGSA 301 350 ENSTTRP00000013748/1-482 XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX ENSBTAP00000054651/1-467 AAPCLERAGQ KLEPLAHCVP VFQRTQPSSE LAAAENDTDT DSGYGGEAEA bmy_22049T0/1-500 AAPCLERAGQ KLEPLAHCVP VIQRTQPSAE L-AAENDTDT DSGYGGEAEA ENSP00000242728/1-482 AAPCLERAGQ KLEPLAYCVP VIQRTQPSAE L-AAENDTDT DSGYGGEAEA 351 400 ENSTTRP00000013748/1-482 XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX ENSBTAP00000054651/1-467 RPDREKGKGA GASRVTIKQE PPGEDSPAPK RMRLDTR--G GGGGPGGVSA bmy_22049T0/1-500 RPDRDKGKGA GASRVTIKQE PPGEDSPAPK RMKLDSR--- SGGGLGGGAA ENSP00000242728/1-482 RPDREKGKGA GASRVTIKQE PPGEDSPAPK RMKLDSRGGG SGGGPGGGAA 401 450 ENSTTRP00000013748/1-482 XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX ENSBTAP00000054651/1-467 AAAAALL--- -VGLTNMLRP ERCLNTVFEA NSSNISSKCT KRTERPTDFL bmy_22049T0/1-500 AAAAA----- ---------- ---------- ---------- ---------- ENSP00000242728/1-482 AAAAALLGPD PAAAAALLRP DAALLSSLVA FGGGGGAPFP QPAAAAAPFC 451 500 ENSTTRP00000013748/1-482 XXXXXXXXXX XXXXXXXXXX XXXXXXXX-- -XXXXXXXXX XXXXXXX-XX ENSBTAP00000054651/1-467 LSYS------ -----DCCLS PHFSKCYL-- -GNTLKIFRQ GLGLSLT-KK bmy_22049T0/1-500 ---------- ---------- ---------- -----PFPLL YPGIPAP-AA ENSP00000242728/1-482 LPFCFLSPSA AAAYVQPFLD KSGLEKYLYP AAAAAPFPLL YPGIPAPAAA 501 550 ENSTTRP00000013748/1-482 XXXXXXXXXX XXXXXXXXXV LSPPPLA--A AAAAATLLPH EVAPPGALHP ENSBTAP00000054651/1-467 AFFVIIYAAA AAAFPCLSSV LSPPPKKAAA AAAAATLLPH EVAPPGALHP bmy_22049T0/1-500 AAAAAAAAAA AAAFPCLSSV LSPPPEK-AA AAAAATLLPH EVAPPGALHP ENSP00000242728/1-482 AAAAAAAAAA AAAFPCLSSV LSPPPEK--A GAAAATLLPH EVAPLGAPHP 551 600 ENSTTRP00000013748/1-482 PPPHGRTHLP FAGRSEPGNP ESSAREDPSQ PGKETP ENSBTAP00000054651/1-467 AHPHGRTHLP FAGAREPGNP ESSAQEDPSQ PAKETL bmy_22049T0/1-500 PPPHGRTHLP FAGRCEPGKP ESSAQEDPSQ AGKETP ENSP00000242728/1-482 QHPHGRTHLP FAGPREPGNP ESSAQEDPSQ PGKEAP