KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 18:24:30 2014 Check: 00 .. Name: BACU017607/1-676 Len: 690 Check: 6122 Weight: 1.00 Name: bmy_08924T0/1-312 Len: 690 Check: 9061 Weight: 1.00 Name: ENSTTRP00000008033/1-313 Len: 690 Check: 1091 Weight: 1.00 Name: ENSP00000244745/1-474 Len: 690 Check: 6137 Weight: 1.00 Name: ENSBTAP00000054654/1-378 Len: 690 Check: 9848 Weight: 1.00 // 1 50 BACU017607/1-676 MVQQTNNAEN TEALLAGESS DSGAGLELGI ASSPTPGSTA STGGKADDPS bmy_08924T0/1-312 MVQQR----- ------GARA KRDGG----- --PPPPGPGP AEEG-AREPG ENSTTRP00000008033/1-313 MVQQR----- ------GARA KRDGG----- --PPPPGPGP AEEG-AREPG ENSP00000244745/1-474 MVQQTNNAEN TEALLAGESS DSGAGLELGI ASSPTPGSTA STGGKADDPS ENSBTAP00000054654/1-378 MVQQTNNAEN TEALLAGESS DSGAGLELGI ASSPTPGSTA STGGKADDPS 51 100 BACU017607/1-676 WCKTPSGHIK RPMNAFMVWS QIERRKIMEQ SPDMHNAEIS KRLGKRWKLL bmy_08924T0/1-312 WCKTPSGHIK RPMNAFMVWS QHERRKIMDQ WPDMHNAEIS KRLGRRWQLL ENSTTRP00000008033/1-313 WCKTPSGHIK RPMNAFMVWS QHERRKIMDQ WPDMHNAEIS KRLGRRWQLL ENSP00000244745/1-474 WCKTPSGHIK RPMNAFMVWS QIERRKIMEQ SPDMHNAEIS KRLGKRWKLL ENSBTAP00000054654/1-378 WCKTPSGHIK RPMNAFMVWS QIERRKIMEQ SPDMHNAEIS KRLGKRWKLL 101 150 BACU017607/1-676 KDSDKIPFIR EAERLRLKHM ADYPDYKYRP RKKVKSGNAN SGSSAASSSK bmy_08924T0/1-312 QDSEKIPFVR EAERLRLKHM ADYPDYKYRP RKKSK----- -GAPAKARPR ENSTTRP00000008033/1-313 QDSEKIPFVR EAERLRLKHM ADYPDYKYRP RKKSK----- -GAPAKARPR ENSP00000244745/1-474 KDSDKIPFIR EAERLRLKHM ADYPDYKYRP RKKVKSGNAN SSSSAAASSK ENSBTAP00000054654/1-378 KDSDKIPFIR EAERLRLKHM ADYPDYKYRP RKKVKSGNAN SGSAAAAASK 151 200 BACU017607/1-676 LGEKGDKVGG SGGGGHGGGG GGGSGNAGGG GGGASGGGAN SKPAQKKXXX bmy_08924T0/1-312 P--------- --------PG GGGSRL---- ---------- ---------- ENSTTRP00000008033/1-313 P--------- -------PGG GGGSRL---- ---------- ---------- ENSP00000244745/1-474 PGEKGDKVGG SGGGGHGGGG GGGSSNAGGG GGGASGGGAN SKPAQKKSCG ENSBTAP00000054654/1-378 PGEKGDKVGG S---GHGGGG GGGSHAGGGG GGG------- ---------- 201 250 BACU017607/1-676 XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX bmy_08924T0/1-312 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000008033/1-313 ---------- ---------- ---------- ---------- ---------- ENSP00000244745/1-474 SKVAGGAGGG VSKPHAKLIL AGGGGGGKAA AAAAASFAAE QAGAAALLPL ENSBTAP00000054654/1-378 ---------- ---------- ---------- ---------- ---------- 251 300 BACU017607/1-676 XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX bmy_08924T0/1-312 ---------- ---------- ---------- --KPGPQLPS R--------G ENSTTRP00000008033/1-313 ---------- ---------- ---------- --KPGSQLPS R--------G ENSP00000244745/1-474 GAAADHHSLY KARTPSASAS ASSAASASAA LAAPGKHLAE KKVKRVYLFG ENSBTAP00000054654/1-378 ---------- ---------- ---------- --APGKHPAE KKVKRVYLFG 301 350 BACU017607/1-676 XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX bmy_08924T0/1-312 GRRAAGGPLG GGAAAPEDDD EDDDEELLEV RLVETPGREL WRMVPAGRAA ENSTTRP00000008033/1-313 GRRAAGGPLG GGAAAPEDDD EDDDEELLEV RLVETPGREL WRMVPAGRAA ENSP00000244745/1-474 GLGTSSSPVG GVGAGADPSD --------PL GLYEEEGAG- --CSPDAPSL ENSBTAP00000054654/1-378 GLGASSSPVG GVGAGADPSD --------PL GLYEEGGAG- --CSPDGPSL 351 400 BACU017607/1-676 XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX bmy_08924T0/1-312 RGQAERSQGP SGEG------ --AAVTAASP TPSEDEEPEE EEE------E ENSTTRP00000008033/1-313 RGQAERSQGP SGEG------ --AAVTAASP TPSEDEEPEE EEE------E ENSP00000244745/1-474 SGRSSAASSP AAGRSPADHR GYASLRAASP APSSAPSHAS SSA------S ENSBTAP00000054654/1-378 SGRSSAASSP AAGRSPADHR SYASLRAASP APSSAPSHAS SSASSSSSSS 401 450 BACU017607/1-676 XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX bmy_08924T0/1-312 AAATEEGEEE TVASGEE--- ------PLGF LSR------- ---------- ENSTTRP00000008033/1-313 AAATEEGEEE TVASGEE--- ------PLGF LSR------- ---------- ENSP00000244745/1-474 SHSSSSSSSG SSSSDDEFED DLLDLNPSSN FES------- ---------- ENSBTAP00000054654/1-378 SSSSSSSSSG SSSSDDEFED DLLDLNPSSN FES------- ---------- 451 500 BACU017607/1-676 XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX bmy_08924T0/1-312 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000008033/1-313 ---------- ---------- ---------- ---------- ---------- ENSP00000244745/1-474 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000054654/1-378 ---------- ---------- ---------- ---------- ---------- 501 550 BACU017607/1-676 XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX bmy_08924T0/1-312 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000008033/1-313 ---------- ---------- ---------- ---------- ---------- ENSP00000244745/1-474 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000054654/1-378 ---------- ---------- ---------- ---------- ---------- 551 600 BACU017607/1-676 XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX bmy_08924T0/1-312 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000008033/1-313 ---------- ---------- ---------- ---------- ---------- ENSP00000244745/1-474 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000054654/1-378 ---------- ---------- ---------- ---------- ---------- 601 650 BACU017607/1-676 XXXXXXXXXX XXXXXXXXXX XXXXXXXXXF LMAKKRLRVS SPLLEETP-- bmy_08924T0/1-312 ---------- ---------- ---------- -LPPGPAGLD CSALDRDPDL ENSTTRP00000008033/1-313 ---------- ---------- ---------- -LPPGPAGLD CSALDRDPDL ENSP00000244745/1-474 ---------- ---------- ---------- -MSLGSFS-S SSALDRDLDF ENSBTAP00000054654/1-378 ---------- ---------- ---------- -MSLGSFS-S SSALDRDLDF 651 700 BACU017607/1-676 --PPPRTASN ELPDLSAPPA RSRV-GSFLR D--------- bmy_08924T0/1-312 P-PPSGTSHF EFPDYCTPEV TEMIAGDWRP SSIADLVFTY ENSTTRP00000008033/1-313 P-PPSGTSHF EFSDYCTLEV TEMIAGDWRP SSIADLVFTY ENSP00000244745/1-474 NFEPGSGSHF EFPDYCTPEV SEMISGDWLE SSISNLVFTY ENSBTAP00000054654/1-378 NFEPGSGSHF EFPDYCTPEV SEMISGDWLE SSISNLVFTY