KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 18:24:44 2014 Check: 00 .. Name: ENSP00000246105/1-183 Len: 309 Check: 5709 Weight: 1.00 Name: ENSBTAP00000054689/1-169 Len: 309 Check: 9067 Weight: 1.00 Name: bmy_08927T0/1-309 Len: 309 Check: 6472 Weight: 1.00 Name: BACU015596/1-151 Len: 309 Check: 492 Weight: 1.00 Name: ENSTTRP00000000683/1-182 Len: 309 Check: 2257 Weight: 1.00 // 1 50 ENSP00000246105/1-183 MKLLFPIFAS LMLQYQVNTE FIGLRRCLMG LGRCRDHCNV DEKEIQKCKM ENSBTAP00000054689/1-169 MKLLFPIFAS LMLQWQVNTE YFGLRRCLMG LGRCKEHCNM DEKELDKCKK bmy_08927T0/1-309 MKLLFPIFAS LMLQYQVNTE YFGLGRCVMG FGRCKDHCAM DEKEVDKCKK BACU015596/1-151 ---------- ------LCAE YFGLGRCVMG FGRCKDHCAM DEKEVDKCKK ENSTTRP00000000683/1-182 MKLLFPIFAS LMLQYQVNTE YFGLGRCVMG FGRCKDHCAM DEKEVDKCKK 51 100 ENSP00000246105/1-183 KKCCVGPKVV KLIKNYLQYG TPNVLNEDVQ EMLKPAKNSS AVIQ-RKHIL ENSBTAP00000054689/1-169 KTCCIRSKVV QLIKNYIQNE MLHMLKEDSQ EVLKITKNFS VMMQTEHHNL bmy_08927T0/1-309 KKCCIGPKVV RLIKSYIQNE MLHTLEEDSQ ELLKLTKNFS VVMQTKNHIL BACU015596/1-151 KKCCIGPKVV RLIKSYIQNE MLHTLEEDSQ ELLKITKNFS VVMQTKNHTL ENSTTRP00000000683/1-182 KKCCIGPKVV QLIKSFIQNE MLHTLEEDSQ EVLKITKNFS VVMQTKNHIL 101 150 ENSP00000246105/1-183 SVLPQIKSTS FFANTNFVII PNATPMNSAT IS-------- ---------- ENSBTAP00000054689/1-169 SVLPKIKSAN AFAKINTIII PNATIVNSAT TN-------- ---------- bmy_08927T0/1-309 SLLPKFRSVN PFANINTIVI PNATTKERYA KSNGNSMGLN PKLSLMKHPK BACU015596/1-151 SLLPKFRSVN PFANSNTIVI PNATTVNSAT NN-------- ---------- ENSTTRP00000000683/1-182 ALLPKFKSVN TFANINTSVI PNVTTVKSVT TN-------- ---------- 151 200 ENSP00000246105/1-183 -TMTPGQITY TATSTKS--- NTKESRDSAT ASPPP----- ---------- ENSBTAP00000054689/1-169 -PVNSGKIIH TATS------ -TRKRRDLGT DSPPP----- ---------- bmy_08927T0/1-309 LPSSPPKLAT TCSTLNCPHG SSQTPLDFHT QQPFPRLDIY QQTGLQNILY BACU015596/1-151 -PMIAGKIIH TATSTKS--- DTKKRRDSAT DSPPP----- ---------- ENSTTRP00000000683/1-182 -PMIAGKIIH TVTSTKS--- DTKKKRDSAT DSPPP----- ---------- 201 250 ENSP00000246105/1-183 ---------- -----APPPP NILPTPSLEL EEAEEQ---- ---------- ENSBTAP00000054689/1-169 ---------- -----APPPS YILPT----- ---------- ---------- bmy_08927T0/1-309 QLKITGTVHS CPRFASPLPT LNFPLPINQT TDEGVEGYVS YSPRDSHSFT BACU015596/1-151 ---------- -----APPP- ---------- ---------- ---------- ENSTTRP00000000683/1-182 ---------- -----APPPT --LPT-TLEL EEADEQG--- ---------- 251 300 ENSP00000246105/1-183 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000054689/1-169 ---------- ---------- ---------- ---------- ---------- bmy_08927T0/1-309 PVPECSCGSM ESHPYIHDQK HNYNYKAYHN SNWPNILQFS THSPTLCQGF BACU015596/1-151 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000000683/1-182 ---------- ---------- ---------- ---------- ---------- 301 350 ENSP00000246105/1-183 --------- ENSBTAP00000054689/1-169 --------- bmy_08927T0/1-309 MRIHGAERL BACU015596/1-151 --------- ENSTTRP00000000683/1-182 ---------