KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 4 Type: P Thu May 15 18:24:45 2014 Check: 00 .. Name: ENSP00000341963/1-617 Len: 1085 Check: 4829 Weight: 1.00 Name: ENSBTAP00000054693/1-616 Len: 1085 Check: 6213 Weight: 1.00 Name: bmy_09922T0/1-1083 Len: 1085 Check: 3555 Weight: 1.00 Name: BACU005672/1-1024 Len: 1085 Check: 1452 Weight: 1.00 // 1 50 ENSP00000341963/1-617 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000054693/1-616 ---------- ---------- ---------- ---------- ---------- bmy_09922T0/1-1083 YLLVRAGGSE SLSVCEGGKE RTGGRASSPR RPPAAPARPR RRRRPAPRPG BACU005672/1-1024 ---------- ---------- ---------- ---------- ---------- 51 100 ENSP00000341963/1-617 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000054693/1-616 ---------- ---------- ---------- ---------- ---------- bmy_09922T0/1-1083 RAELGRARAM LLTVYCVRRD LSEVTFSLQV DADFELHNFR ALCELESGIP BACU005672/1-1024 ---------M LLTVYCVRRD LSEVTFSLQV DADFELHNFR ALCELESGIP 101 150 ENSP00000341963/1-617 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000054693/1-616 ---------- ---------- ---------- ---------- ---------- bmy_09922T0/1-1083 AAESQIVYAE RPLTDNHRSL ASYGLKDGDV VILRQKENAD PRPSVQFPNL BACU005672/1-1024 AAESQIVYAE RPLTDNHRSL ASYGLKDGDV VILRQKENAD PRPSVQFPNL 151 200 ENSP00000341963/1-617 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000054693/1-616 ---------- ---------- ---------- ---------- ---------- bmy_09922T0/1-1083 PRIDFRSIAV PGTSNTRQRQ PAGAQQSHSS PGEVASSPQG LDNPALLRDM BACU005672/1-1024 PRIDFRSIAV PGTSNTRQRQ PAGAQQSHSS PGEVASSPQG LDNPALLRDM 201 250 ENSP00000341963/1-617 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000054693/1-616 ---------- ---------- ---------- ---------- ---------- bmy_09922T0/1-1083 LLANPHELSL LKERNPPLAD ALLSGDLEKF SRVLVEQQQD RARREQERIR BACU005672/1-1024 LLANPHELSL LKERNPPLAD ALLSGDLEKF SRVLVEQQQD RARREQERIR 251 300 ENSP00000341963/1-617 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000054693/1-616 ---------- ---------- ---------- ---------- ---------- bmy_09922T0/1-1083 LFSADPFDLE AQAKIEEDIR QQNIEENMTI AMEEAPESFG QVVMLYINCK BACU005672/1-1024 LFSADPFDLE AQAKIEEDIR QQNIEENMTI AMEEAPESFG QVVMLYINCK 301 350 ENSP00000341963/1-617 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000054693/1-616 ---------- ---------- ---------- ---------- ---------- bmy_09922T0/1-1083 VNGHPVKAFV DSGAQMTIMS QACAERCNIM RLVDRRWAGI AKGVGTQKII BACU005672/1-1024 VNGHPVKAFV DSGAQMTIMS QACAERCNIM RLVDRRWAGI AKGVGTQKII 351 400 ENSP00000341963/1-617 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000054693/1-616 ---------- ---------- ---------- ---------- ---------- bmy_09922T0/1-1083 GRVHLAQVQI EGDFLACSFS ILEEQPMDML LGLDMLKRHQ CSIDLKKNVL BACU005672/1-1024 GRVHLAQVQI EGDFLACSFS ILEEQPMDML LGLDMLKRHQ CSIDLKKNVL 401 450 ENSP00000341963/1-617 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000054693/1-616 ---------- ---------- ---------- ---------- ---------- bmy_09922T0/1-1083 VIGTTGSKTT FLPEGELPEC ARLAYGAGRE EVRPEEIADQ ELAEALQKSV BACU005672/1-1024 VIGTTGSKTT FLPEGELPEC ARLAYGAGRE EVRPEEIADQ ELAEALQKSV 451 500 ENSP00000341963/1-617 ---------- ----MSSLPT SDGFNHPARS SGQSPDVGNP MSLARSVSAS ENSBTAP00000054693/1-616 ---------- ----MSSLPT SDGFNHQAHP PGLSPEIGNP PSLAHSVSAS bmy_09922T0/1-1083 EDAEKSGKET TSLGMSSLPT SDGFNHQAHP SGQSPEIGNP SSLAHSVSAS BACU005672/1-1024 EDAEKSGKET TSLGMSSLPT SDGFNHQAHP SGQSPEIGNP SRLAHSVSAS 501 550 ENSP00000341963/1-617 VCPIKPSDSD RIEPKAVKAL KASAEFQLNS EKKEHLSLQD LSDHASSADH ENSBTAP00000054693/1-616 VSPIQPSDAD SIEPKAVKAL KASAELQITS EQKEHLPPQD LSDCAPSADS bmy_09922T0/1-1083 VCPVEPTDPD STEPKALKAL KASAEFQVTS EKKEHLPLQD LSDCASSADS BACU005672/1-1024 VCPIEPSDPD STEPKALKAL KASAEFQVTP EKKEHLPLQD LSDCASSADS 551 600 ENSP00000341963/1-617 APTDQSPAMP MQNSSEEITV AGNLEKSAER STQGLKFHLH TRQEASLSVT ENSBTAP00000054693/1-616 APANQSPAMP LQNSLEEAIV ADHVEKSAER STQGLKSHLH TRQEASLSVT bmy_09922T0/1-1083 APADQSPAMP LQNSLEEAIV ADNLEKSAER STQGLTSHLH TRQEVSLSV- BACU005672/1-1024 APADQSPAMP LQNSLEEAIV AGNLEKSAER STQGLTSHLH TRQEVSLSV- 601 650 ENSP00000341963/1-617 STRMHEPQMF LGEKDWHPEN QNLSQVSDPQ QHEEPGNEQY EVAQQKASHD ENSBTAP00000054693/1-616 TTGMQEPQRL TGEKVWHPEY QDPSQVSGLQ QHEEPRNE-H EVIQQSASHD bmy_09922T0/1-1083 -TRMQEPQRL KDEKGWHPEY QDLSQASGLQ QHEEPRNEQH EVIQQNALHD BACU005672/1-1024 -TRMQEPQRL KDEKGWHPEY QDLSQASGLQ QHEEPRNEQH EVIQQNALHD 651 700 ENSP00000341963/1-617 QEYLCNIGDL ELPEERQQNQ HKIVDLEATM KGNGLPQNVD PPSAKKSIPS ENSBTAP00000054693/1-616 QDHPCHTGDL ELLGERQQS- --SAGLEAAM KGDRLQQNVD LPGTGKDILP bmy_09922T0/1-1083 REHLCNTGDL ELLGEGQQDQ QRGIGSEATM KGDRLQQTVD LSGTEKNILP BACU005672/1-1024 REHLCNTGDL ELLGERQQDQ QRSIGSEATM KGDRLQQTVD LSGTEKNILP 701 750 ENSP00000341963/1-617 SECSGCSNSE TFMEIDTAQQ SLVTLLNSTG RQNANVKNIG ALDLTLDNPL ENSBTAP00000054693/1-616 SGCLGCSNSE TLMEVDIVEQ SLVAVPNS-G GQNTNVKNSG ASDLILDNPL bmy_09922T0/1-1083 SGCFGCSSSE TLMEVDTVEE SLVAVLNSAG GQNTSVRNIG ASDLTLDNPL BACU005672/1-1024 SGCFGCSSSE TLMEVDIVEE SLAAVLNSAG GQNTSVRNTG ASDLTLDNPL 751 800 ENSP00000341963/1-617 MEVETSKCNP SSEILNDSIS TQDLQPPETN VEIPGTNKEY GHYSSP--SL ENSBTAP00000054693/1-616 MEVETSKCNP SSEISSNSIS TQDLQLLESN VEMSETSKEC GDHPSSLISL bmy_09922T0/1-1083 MEVETSKCNP SSEILSNSIS TQDLQLPESN VEMSGTSKEY GNCPSSLISL BACU005672/1-1024 MEVETSKCNP SSEILSNSIS TQDLQLPESN VEMSGTSKEY GNCPSSLISL 801 850 ENSP00000341963/1-617 CGSCQPSVES AEESCPSITA ALKELHELLV VSSKPASENT SEEVICQSET ENSBTAP00000054693/1-616 CGSCQPSVES SEESCSSLTA ALKELHELLV ISSKPASENT SEEGFCQSET bmy_09922T0/1-1083 CGSCQPSVES TEESCSSVTA ALKELHELLV ISSKPASENT SEEVICQSET BACU005672/1-1024 CGSCQPSVES TEESCSSVTA ALKELHELLV ISSKPASENT SEEVICQSET 851 900 ENSP00000341963/1-617 IAEGQTSIKD LSERWTQNEH L--TQNEQCP QVSFHQAISV SVETEKLTGT ENSBTAP00000054693/1-616 VVEGQTGIKD LSERWTQNEH LTATQSEQCS QVSFHQAISI AVKTEELTDT bmy_09922T0/1-1083 VTEGRTGIKD LSERWTQNEH LTATQSEHCS QVSFHQAVSV TVKTEELTYP BACU005672/1-1024 ATEGQTGIKD LSERWTQNEH LTATQSEHCS QVSFHQAVSV TVKTEELTYT 901 950 ENSP00000341963/1-617 SSDTGREAVE NVNFRSLGDG LSTDKEGVPK SRESINKNRS VTVTSAKTSN ENSBTAP00000054693/1-616 SADTGVEDGE TVNLRGPGDG LLTDKEGVPK SKESVNKSSS VTVASAEASN bmy_09922T0/1-1083 STDAGVEDVE NINFRGPGDG VLTDKEGVLK SKESINESSS VTVASAETSN BACU005672/1-1024 STDAGVEDVE NINFRGPGDG VLTDKEGVPK PKESINESSS VTLASAETSN 951 1000 ENSP00000341963/1-617 QLHCTLGVEI SPKLLAGEED ALNQTSEQTK SLSSNFILVK DLGQGIQNSV ENSBTAP00000054693/1-616 QLHCTLGVEI SPRLLADEED TLNQTSEQTE SSSPACILVK DLGQGTQNPV bmy_09922T0/1-1083 QLHCTFGVEI SPGLSAGEED ALSQTSEQTE SLSSSFILVK DLGQGTQNPV BACU005672/1-1024 QLHCTFGVEI SPRLLAGEED ALSQTSEQTE SLSSSFILVK DLGQGTQNPV 1001 1050 ENSP00000341963/1-617 TDRPETRENV CPDASRPLLE YEPPTSHPSS SPAILPPLIF PATDIDRILR ENSBTAP00000054693/1-616 TDRPEAREHV CPEAAGPLLG LEPSTSHPSP SPSFLAPLIF PAADIDRILR bmy_09922T0/1-1083 TDRPETRENV CSEAAGPLLE FVPPTSHPSS SPSFLAPLIF PAADINRILR BACU005672/1-1024 TDRPETRENV CSEAAGPLLE FVPPTSHPSS SPSFLAPLIF PAADINRILR 1051 1100 ENSP00000341963/1-617 AGFTLQEALG ALHRVGGNAD LALLVLLAKN IVVPT ENSBTAP00000054693/1-616 AGFTLQEALG ALHRVGGNAD LALLVLLAKN IVVPT bmy_09922T0/1-1083 AGFTLQEALG ALHRVGGNAD LALLVLLAKN IVVPT BACU005672/1-1024 AGFTLQEALG ALHRVGGNVD LALLVLLAKN IVVPT