KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 4 Type: P Thu May 15 18:24:49 2014 Check: 00 .. Name: ENSP00000420494/1-243 Len: 253 Check: 3144 Weight: 1.00 Name: ENSTTRP00000008292/1-245 Len: 253 Check: 9403 Weight: 1.00 Name: ENSBTAP00000054739/1-208 Len: 253 Check: 3025 Weight: 1.00 Name: bmy_00382T0/1-217 Len: 253 Check: 238 Weight: 1.00 // 1 50 ENSP00000420494/1-243 MSSGTELLWP GAA-LLVLLG VAASLCVRCS RP----GAKR SEKIYQQRSL ENSTTRP00000008292/1-245 MSVDTELLWS GAA-LLLLLG AAAGLCVRCS PRA---GAKR SEKIYEQRSL ENSBTAP00000054739/1-208 MSADTELLWP GAA-LLLLLG AAASLCVRCS RP----GAKK SEKIYEQRSL bmy_00382T0/1-217 MSADTELLWP GAALLLLLLG AAAGLCVRCS RPGKGWGAKR SEKIYEQRSW 51 100 ENSP00000420494/1-243 REDQQSFTGS RTYSLVGQAW PGPLAD---- MAPTRKDKLL QFYPSLEDPA ENSTTRP00000008292/1-245 QENQQNFAVA RTYTLVREAW PGPLVDTASN AASARKDKLL QFSPSLEESS ENSBTAP00000054739/1-208 QENQQSFAVA RTYTLVREAW PG---DTASN MELTRKDKLL RFSPSLEDSS bmy_00382T0/1-217 EENQQNFAVA RTYTLVREPW PGPLVDTASN AASARKDKLL QFSPSLEDSS 101 150 ENSP00000420494/1-243 SSRYQNFSKG SRHGSEEAYI DPIAMEYYNW GRFSKPPED- DDANSYENVL ENSTTRP00000008292/1-245 SSRYQNFSKG SRRTSDASYI HPFAMDYFDS GRFQKPPEDE DDTNSY-NVL ENSBTAP00000054739/1-208 SPRYQYFSKG SRPRSEEAYI DPTSTDYYNY DPFQKPVEDD DDTNSYENVL bmy_00382T0/1-217 SSRYQNFSKG RWAPRRRGPQ HPFATDYFDC GRFQKPPEDD DDTNSYENVL 151 200 ENSP00000420494/1-243 ICKQKTTETG AQQEGIGGLC RGDLSLSLAL KTGPTSGLCP SASPEEDEES ENSTTRP00000008292/1-245 ICE-KITESX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX ENSBTAP00000054739/1-208 ICKPKRMESA ---------- ---------- ---------- ------DEGS bmy_00382T0/1-217 ICEPKKTESG ---------- ---------- ---------- ------DEGS 201 250 ENSP00000420494/1-243 EDYQNSASIH QWRESRKVMG QLQREASPGP VGSPDEEDGE PDYVNGEVAA ENSTTRP00000008292/1-245 XXXXXXXXXX XXXXXXXXXX PV-REAPPYP VGSPDED-GE PDYVNGDVAA ENSBTAP00000054739/1-208 EDYQNSASIQ QWRESKKVME PAPREAPVSL AGSPDED-GE PDYVNGDVAA bmy_00382T0/1-217 EDYQNSAYIR QWRESRRVVE PVRREAPPSP VGSPDEDGGE PDYVNGDVAA 251 300 ENSP00000420494/1-243 TEA ENSTTRP00000008292/1-245 IKA ENSBTAP00000054739/1-208 IEA bmy_00382T0/1-217 TKA