KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 18:24:51 2014 Check: 00 .. Name: ENSP00000442308/1-705 Len: 784 Check: 9243 Weight: 1.00 Name: ENSBTAP00000054751/1-690 Len: 784 Check: 3030 Weight: 1.00 Name: BACU007510/1-746 Len: 784 Check: 8930 Weight: 1.00 Name: ENSTTRP00000012436/1-682 Len: 784 Check: 26 Weight: 1.00 Name: bmy_10755T0/1-781 Len: 784 Check: 351 Weight: 1.00 // 1 50 ENSP00000442308/1-705 ---------M GFMLP----- ---------- ---------- ---------- ENSBTAP00000054751/1-690 ---------- ---------- ---------- ---------- ---------- BACU007510/1-746 MAGGRLLLGG DFLSPPPLPP LPPPPLPPLP PPPPEPVLEQ WRYSHESDWQ ENSTTRP00000012436/1-682 ---------- ---------- ---------- ---------- ---------- bmy_10755T0/1-781 MAGGRLLLGG DFLSPPPLPP LPPPPLPPLP PPPPEPVLEQ WRYSHESDWQ 51 100 ENSP00000442308/1-705 ---------- ---------- ---------- -----LIFRY SPRLMEKILQ ENSBTAP00000054751/1-690 ---------- ---------- ---------- ---------- ----MEKILQ BACU007510/1-746 WALRRSFICR HLHSYPGAAL DQLLALSAAW TNHVFLGCRY SPRLMEKILQ ENSTTRP00000012436/1-682 ---------- ---------- ---------- ---------- ---------- bmy_10755T0/1-781 WALRRSFICR HLHSYPGAAL DQLLALSAAW TNHVFLGCRY SPRLMEKILQ 101 150 ENSP00000442308/1-705 MAEGIDIGEM PSYDLVLSKP SKGQKRHLST CDGQNPPKKQ AGSKFHARPR ENSBTAP00000054751/1-690 MAEGIDIGEM PSYDLMLSKA SKGQKRHLST CDGQNPPKKQ AGSKFHVRPR BACU007510/1-746 MAEGIDIGEM PSYDLML--- SKGHKRHLST CDGQSPPKKQ AGSKFHVRPR ENSTTRP00000012436/1-682 MAEG--DGEM PSYDLMLSKP SKGQKRHLST CDGQNPPKKQ AGSKFHVRPR bmy_10755T0/1-781 MAEGIDIGEM PSYDLML--- SKGQKRHLST CDGQSPPKKQ AGSKFHVRPR 151 200 ENSP00000442308/1-705 FEPVHFVASS SKDERQEDPY GPQTKEVNEQ THFASMPRDI YQDYTQDSFS ENSBTAP00000054751/1-690 FEPVHFVASS SKDERQEDPY GPQAKERNEQ THFANVPRDI YQDYTQDSFS BACU007510/1-746 FEPVHFVASS SKDERQEDPY GPQTKEVNEQ THFASMPRDI YQDYTQDSFS ENSTTRP00000012436/1-682 FEPVHFVASS SKDERQEDPY GPQTKEVNEQ THFASMPRDI YQDYTQDSFS bmy_10755T0/1-781 FEPVHFVASS SKDERQEDPY GPQTKEVNEQ THFASMPRDI YQDYTQDSFS 201 250 ENSP00000442308/1-705 IQDGNSQYCD SSGFILTKDQ PVTANMYFDS GNPAPSTTSQ QANSQSTPEP ENSBTAP00000054751/1-690 IQDGNSQYCD SSGFIFTKDK PVTANMYFDS GNPAPSSTSQ QADSQSPPEP BACU007510/1-746 IQDGNSQYCD SSGFIFTKDQ PVTANIYFHS GNPAPSSTSQ QANCQSAPEP ENSTTRP00000012436/1-682 IQDGNSQYCD SSGFIFTKDQ PVTANMYIDS GNPAPSSTSQ QANCQSAPEP bmy_10755T0/1-781 IQDGNSQYCD SSGFIFTKDQ PVTANMYFDS GNPAPSSTSQ QANCQSAPEP 251 300 ENSP00000442308/1-705 SPSQTFPESV VAEKQYFIEK LTATIWKNLS NPEMTSGSDK INYTYMLTRC ENSBTAP00000054751/1-690 SPSQTFPESV VAEKQYFIEK LTATIWKNLS NPEMTSGSDK INYTYMLTRC BACU007510/1-746 SPSQTFPESV VAEKQYFIEK LTAAIWKNLS NPEMTYGCDK INYTYMLTRC ENSTTRP00000012436/1-682 SPSQTFPESV VAEKQYFIEK LTATIWKNLS NPEMTSGSDK INYTYMLTRC bmy_10755T0/1-781 SPSQTFPESV VAEKQYFIEK LTAAIWKNLS NPEMTYGCDK INYTYMLTRC 301 350 ENSP00000442308/1-705 IQACKTNPEY IYAPLKEIPP ADIPKNKKLL TDGYACEVRC QNIYLTTGYA ENSBTAP00000054751/1-690 IQACKTNPEY IYAPLKEIPP ADIPKNKKLL TDGYACEVRC QNIYLTTGYA BACU007510/1-746 IQACKTNPEY IYAPLKEIPP ADIPKNKKLL TDGYACEVRC QNIYLTTGYA ENSTTRP00000012436/1-682 IQACKTNPEY IYAPLKEIPP ADIPKNKKLL TDGYACEVRC QNIYLTTGYA bmy_10755T0/1-781 IQACKTNPEY IYAPLKEIPP ADIPKNKKLL TDGYACEVRC QNIYLTTGYA 351 400 ENSP00000442308/1-705 GSKNGSRDRA TELAVKLLQK RIEVRVVRRK FKHTFGEDLV VCQIGMSSYE ENSBTAP00000054751/1-690 GSKNGSRDRA TELAVKLLQK RIEVRVIRRK FKHTFGEDLV VCQIGMPSYD BACU007510/1-746 GSKNGSRDRA TELAVKLLQK RIEVRVVRRK FKHTIGEDLV VCQIGMPSYE ENSTTRP00000012436/1-682 GSKNGSRDRA TELAVKLLQK RIEVRVVRRK FKHTIGEDLV VCQIGMPSYE bmy_10755T0/1-781 GSKNGSRDRA TELAVKLLQK RIEVRVVRRK FKHTIGEDLV VCQIGMPSYE 401 450 ENSP00000442308/1-705 FPPALKPPED LVVLGKDASG QPIFNASAKH WTNFVITENA NDAIGILNNS ENSBTAP00000054751/1-690 FPPALKPPEE LVVLAKDASG QPIFNASAKH WTNFILTENA NDAIGILNNS BACU007510/1-746 FPPALKPPEE LVVLAKDASG QPIFNASAKH WTNFILTENA NDAIGILNNS ENSTTRP00000012436/1-682 FPPALKPPEE LVVLAKDASG QPIFNASAKH WTNFILTENA NDAIGILNNS bmy_10755T0/1-781 FPPALKPPEE LVVLAKDASG QPIFNASAKH WTNFILTENA NDAIGILNNS 451 500 ENSP00000442308/1-705 ASFNKMSIEY KYEMMPNRTW RCRVFLQDHC LAEGYGTKKT SKHAAADEAL ENSBTAP00000054751/1-690 ASYNKMSVEY KYEMMPNRTW RCRVFLQDHC LAEGYGTKKT SKHAAADEAL BACU007510/1-746 ASYNKMSVEY KYEMMPNRTW RCRVFLQDHC LAEGYGTKKT SKHAAADEAL ENSTTRP00000012436/1-682 ASYNKMSVEY KYEMMPNRTW RCRVFLQDHC LAEGYGTKKT SKHAAADEAL bmy_10755T0/1-781 ASYNKMSVEY KYEMMPNRTW RCRVFLQDHC LAEGYGTKKT SKHAAADEAL 501 550 ENSP00000442308/1-705 KILQKTQPTY PSVKSSQCHT GSSPRGSGKK KDIKDLVVYE NSSNPVCTLN ENSBTAP00000054751/1-690 KILQKTQPTY PSVKSSQCQA GSSPRGSGKK KDIKDLVVYE NSSNPVCTLN BACU007510/1-746 KILQKTQPTY PSVKSSQCQT GSSPRGSGKK KDIKDLVVYE NSSNPVCTLN ENSTTRP00000012436/1-682 KILQKTQPTY PSVKSSQCQT GSSPRGSGKK KDIKDLVVYE NSSNPVCTLN bmy_10755T0/1-781 KILQKTQPTY PSVKSSQCQT GSSPRGSGKK KDIKDLVVYE NSSNPVCTLN 551 600 ENSP00000442308/1-705 DTAQFNRMTV EYVYERMTGL RWKCKVILES EVIAEAVGVK KTVKYEAAGE ENSBTAP00000054751/1-690 DTAQFNRMTV EYVYERMTGL RWKCKVILES EVIAEAVGVK KTVKYEAAGE BACU007510/1-746 DTAQFNRMTV EYVYERMTGL RWKCKVILES EVIAEAVGVK KTVKYEAAGE ENSTTRP00000012436/1-682 DTAQFNRMTV EYVYERMTGL RWKCKVILES EVIAEAVGVK KTVKYEAAGE bmy_10755T0/1-781 DTAQFNRMTV EYVYERMTGL RWKCKVILES EVIAEAVGVK KTVKYEAAGE 601 650 ENSP00000442308/1-705 AVKTLKKTQP TVINNLKKGA VEDVISRNEI QGRSAEEAYK QQIKEDNIGN ENSBTAP00000054751/1-690 AVKTLKKTQP TVINNLKKGA IEDVISRNEI QGRSAEEAYK QQIKEDNIGN BACU007510/1-746 AVKTLKKTQP TVINNLKKGA IEDVISRNEI QGRSAEEAYK QQIKEDNIGN ENSTTRP00000012436/1-682 AVKTLKKTQP TVINNLKKGA IEDVISRNEI QGRSAEEAYK QQIKEDNIGN bmy_10755T0/1-781 AVKTLKKTQP TVINNLKKGA IEDVISRNEI QGRSAEEAYK QQIKEDNIGN 651 700 ENSP00000442308/1-705 QLLRKMGWTG GGLGKSGEGI REPISVKEQH KREGLGLDVE RVNKIAKRDI ENSBTAP00000054751/1-690 QLLRKMGWTG GGLGKSGEGI REPISVKEQH KREGLGLDVE RVNKIAKRDI BACU007510/1-746 QLLRKMGWTG GGLGKSGEGI REPISVKEQH KREGLGLDVE RVNKIAKRDI ENSTTRP00000012436/1-682 QLLRKMGWTG GGLGKSGEGI REPISVKEQH KREGLGLDVE RVNKIAKRDI bmy_10755T0/1-781 QLLRKMGWTG GGLGKSGEGI REPISVKEQH KREGLGLDVE RVNKIAKRDI 701 750 ENSP00000442308/1-705 EQIIRNYARS ESHTDLTFSR ELTNDERKQI HQIAQKYGLK SKSHGVGHDR ENSBTAP00000054751/1-690 EQIIRNYARS ESHTDLTFST ELTNDERKQI HQIAQKYGLK SKSHGVGHDR BACU007510/1-746 EQIIRNYARS ESHTDLTFST ELTNDERKQI HQIAQKYGLK NKSS------ ENSTTRP00000012436/1-682 EQIIRNYARS ESHTDLTFST ELTNDERKQI HQIAQKYGLK SKSHGVGHDR bmy_10755T0/1-781 EQIIRNYARS ESHTDLTFST ELTNDERKQI HQIAQKYGLK SKSHGVGHDR 751 800 ENSP00000442308/1-705 YLVVGRKRRK EDLLDQLKQE GQVGHYELVM PQAN ENSBTAP00000054751/1-690 YLVVGRKRRK EDLLDQLKQE GQVGHYELVM PQAN BACU007510/1-746 ---VNIQR-- ---------- ---------- ---- ENSTTRP00000012436/1-682 YLVVGRKRRK EDLLDQLKQE GQVGHYELVM PQAN bmy_10755T0/1-781 YLVVGRKRRK EDLLDQLKQE GQVGHYELVM PQAN