KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 4 Type: P Thu May 15 18:24:51 2014 Check: 00 .. Name: ENSP00000302855/1-542 Len: 565 Check: 1050 Weight: 1.00 Name: ENSBTAP00000054760/1-537 Len: 565 Check: 8671 Weight: 1.00 Name: bmy_21736T0/1-364 Len: 565 Check: 5604 Weight: 1.00 Name: BACU017176/1-546 Len: 565 Check: 4104 Weight: 1.00 // 1 50 ENSP00000302855/1-542 MGDIFLCKKV ES---PKKNL RESKQREEDD EDPDLIYVGV EHVHRDAEVL ENSBTAP00000054760/1-537 MAHLFPCEEA QARPQPEKKT AGSKSRDEDD GDAEVIFVGV QHVSEDAETL bmy_21736T0/1-364 ---------- ---------- ---------- ---------- ---------- BACU017176/1-546 ---------- ---------M GGSKPRDEDE DSAEVIFVGV EHVNEDAETL 51 100 ENSP00000302855/1-542 FVGMISNSKP VVSNILNRVT PGSKSRRKKG HFRQYPAHVS QPANHVTSMA ENSBTAP00000054760/1-537 FVRGISSSKP VISNILNGVT RDSSSRRKKG HVGPDPSCTS QPANLRTPAS bmy_21736T0/1-364 ---------- ---------- ---------- ---------- ---------- BACU017176/1-546 FVRVISNSKP IISNILNRVT RDSSSTRKKG HVSQDTTCTL QPANCRTPMS 101 150 ENSP00000302855/1-542 K--AIMPVSL SEGRSTDSPV TMKSSSEPGY KMSSPQVVSP NYSDSLPPGT ENSBTAP00000054760/1-537 EPAAISPASQ SEWGGRDNPI IFEPSSKPDY KTSSLQAMLH N-SELLSPRS bmy_21736T0/1-364 ---------- ---------- ---------- ---------- ---------- BACU017176/1-546 KPAAISPAFQ SEWGDVDSPI IFEPSSKPDY KMSSLQVVLH NSSDLLSPWP 151 200 ENSP00000302855/1-542 QCLVGAMVSG GGRNESSPDS KRLSTSDIN- -SRDSKRVKL RDGIPGVPSL ENSBTAP00000054760/1-537 HCLSGAVLSL GVKDESPLNS KRCPTSDVNF NSGNPKRPKL SDGIPGGPAS bmy_21736T0/1-364 ---------- ---------- ---------- ---------- ---------- BACU017176/1-546 HCLPGAAFSV GGKDKSPRDS KRCPTSDMNI YSGNPKRLQV SHGIPGGQAS 201 250 ENSP00000302855/1-542 AVVPSDMSST ISTNTPSQGI CNSSNHVQNG VTFPWPDANG KAHFNLTDPE ENSBTAP00000054760/1-537 TMPSPGISPT KDTIMTLEDL LTSPSHVH-G ASLSRTHANN QACFSLMDPD bmy_21736T0/1-364 -MASPGILPT KNTSMTLEGV PTSSSHVHSG ASVPWAHAYN QARYHVMDPD BACU017176/1-546 AMASPGILPT KNTSMTPEVV PTSSSHVHSG ASFPWAHVYN QARYHVMDPE 251 300 ENSP00000302855/1-542 RANE-SGLAM TDISSLASQN KTFDPKKENP IVLLSNFYYG QHKGDGQPEQ ENSBTAP00000054760/1-537 RTCSLEGLEK TDFLTLASQS KTVDPMKGNL IMLLDDFYYG QHTGDRQPEQ bmy_21736T0/1-364 GACSLERLAK TDFSSLASQN KTVDPKKGNL IMLLDDFYYG RHPGDRQPEW BACU017176/1-546 GACSLERLAK TDFSSLASQN KTVDPKKGNL IMLLDDFYYG RHPGDRQPEW 301 350 ENSP00000302855/1-542 KTHTTFKCLS CVKVLKNIKF MNHMKHHLEF EKQRNDSWED HTTCQHCHRQ ENSBTAP00000054760/1-537 KTYTAFKCLS CLRVLKNVKF MTHVRNHLEL ERQKGDGWEI HTACQHCRRQ bmy_21736T0/1-364 KTHTTFKCLS CLKVLKNVKF MTHVKNHLEF EKQRDDSWEI HTTCRHCHRQ BACU017176/1-546 KTHTTFKCLS CLKVLKNVKF MTHVKNHLEF EKQRDDGWEI HTTCRHCHRQ 351 400 ENSP00000302855/1-542 FPTPFQLQCH IDSVHIAMGP SAVCKICELS FETDQVLLQH MKDHHKPGEM ENSBTAP00000054760/1-537 FPTPFQLQCH IESVHASREP SAVCKICELS FETDQVLLQH MKDSHKPGEM bmy_21736T0/1-364 FPTPFQLQCH IESVHTSQEP SSVCKICELS FETDQVLLQH MKVNHKPGEM BACU017176/1-546 FPTPFQLQCH IESVHTSQEP SSVCKICELS FETDQVLLQH MKVNHKPGEM 401 450 ENSP00000302855/1-542 PYVCQVCHYR SSVFADVETH FRTCHENTKN LLCLFCLKLF KTAIPYMNHC ENSBTAP00000054760/1-537 PYVCHVCNYR SSAFADVEAH FRTCHGNTNN LLCLLCLRIF KLATSFVNHA bmy_21736T0/1-364 PYVCQVCNYR SSAFADVEAH FRTWHENTNS LLCLFCLRIF KVVTSYVNHA BACU017176/1-546 PYVCQVCNYR SSAFADVEAH FRTWHENTNS LLCLFCLRIF KVVTSYVNHA 451 500 ENSP00000302855/1-542 WRHSRRRVLQ CSKCRLQFLT LKEEIEHKTK DHQTFKKPEQ LQGFPRETKV ENSBTAP00000054760/1-537 WRHWNKRVFP CSRCRLQFLN LKEKTEHQTK HHQSFKMPEQ LQGLPPETEV bmy_21736T0/1-364 WRHWNKRVFQ CSKCRLQFLT LKEKMEHQTK NHQPFKKPEQ LDGLPPETEV BACU017176/1-546 WRHWNKRVFQ CSKCRLQFLT LKEKMEHQTK NHQPFKKPEQ LEGLPPETEV 501 550 ENSP00000302855/1-542 IIQTSVQPGS SGMASVIVSN TDPQSSPVKT KKKTAMNTRD SR-------- ENSBTAP00000054760/1-537 MIRTSVQLGL RETASIIVRN TDAQVPPRKT TSRNSEK--- ---------- bmy_21736T0/1-364 KIRTSVQPGP REAASMIVTN TESQVSPEKT TKRMAMNTRY SRRIAAGVLA BACU017176/1-546 KIRTSVQPGP REAASMIVTN TESQVSPEKT TKRMAMNTRY SRRIAAGVLA 551 600 ENSP00000302855/1-542 ----LPCSKD SS--- ENSBTAP00000054760/1-537 -----PC--- ----- bmy_21736T0/1-364 KNYVLPTCRN PKKLN BACU017176/1-546 KNYVLPTCRN PKKLN