KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 18:24:58 2014 Check: 00 .. Name: ENSP00000263266/1-478 Len: 498 Check: 5645 Weight: 1.00 Name: ENSBTAP00000054778/1-497 Len: 498 Check: 6489 Weight: 1.00 Name: BACU002182/1-294 Len: 498 Check: 2148 Weight: 1.00 Name: ENSTTRP00000007740/1-489 Len: 498 Check: 1315 Weight: 1.00 Name: bmy_06426T0/1-496 Len: 498 Check: 1332 Weight: 1.00 // 1 50 ENSP00000263266/1-478 MAASQLAALE GVDSGP---R VPGASPGFLY SEGQRLALEA LLSKGAEAFQ ENSBTAP00000054778/1-497 MAASQLAALE GMDPGPGGRP QTEASPGFLY SEGQRLALET LLGEGVEAFE BACU002182/1-294 MAASQLAALE GMESGAGQLP LTEATPSFLY SEGQRLALEA LLSQGAEAFE ENSTTRP00000007740/1-489 MAASQLAALG GIESGAGQLP LTEATPSFLY SEGQRLALEA LLSQGAEAFE bmy_06426T0/1-496 MAASQLAALE GMESGAGQLP LTEATPSFLY SEGQRLALEA LLSQGAEAFE 51 100 ENSP00000263266/1-478 TCVQREELWP FLSADEVQGL AAAAEDWTVA KQEPSGMAEG ATTTDVDAGS ENSBTAP00000054778/1-497 ACLRREGLRP FLGGEELRGL VAAAEDWTAA KPEPGGAAEG ADAAHGVSGS BACU002182/1-294 ACVQREGLRP FLSGDELRGL VATAEDWTAA KQEPSRAAEG PTATDGDLGS ENSTTRP00000007740/1-489 ACVQREGLRP FLSGDELRGL VATAEDWTAA KQEPSRAAEG ATATDGDLGS bmy_06426T0/1-496 ACMQREGLRP FLSGDELRGL VATAEDWTAA KQEPSRAAEG ATATDGDLGS 101 150 ENSP00000263266/1-478 LSYWPGQSEQ PAPVLRLGWP VDSAWKGITR AQLYTQPPGE GQPPLKELVR ENSBTAP00000054778/1-497 LTYWPGQSEE AVPVLRLGWP EDSAWKGITR AQLYTQPPGE GQPSLKELVH BACU002182/1-294 LTYWPGHSEE PVPMLRLGWP EDSAWKGITR AQLYTQPPGE GQPSLKELVR ENSTTRP00000007740/1-489 LTYWPGQSEE PVPMLRLGWP EDSAWKGITQ AQLYTQPPGE GQPSLKELVH bmy_06426T0/1-496 LTYWPGHSEE PVPMLRLGWP EDSAWKGITR AQLYTQPPGE GQPSLKELVR 151 200 ENSP00000263266/1-478 LEIQAAHKLV AVVMDVFTDP DLLLDLVDAA TRRWVPVYLL LDRQQLPAFL ENSBTAP00000054778/1-497 QEIRAAHKLV AVVMDVFTDP DLLSDLVEAA TCRWVPVYLL LDRQQLPAFL BACU002182/1-294 QEVQAAHKLV AVVMDIFTDP DLLSDLVDAA TRRWVPVYLL LDRQQLPAFL ENSTTRP00000007740/1-489 QEIQAAHKLV AVVMDVFTDP DLLSDLVDAA TRRWVPVYLL LDHQRLPAFL bmy_06426T0/1-496 QEIQAAHKLV AVVMDIFTDP DLLSDLVDAA TRRWVPVYLL LDRQQLPAFL 201 250 ENSP00000263266/1-478 ELAQQLGVNP WNTENVDVRV VRGCSFQSRW RRQVSGTVRE KFVLLDGERV ENSBTAP00000054778/1-497 TLAQQLGVNP WATENLDIRV VRGCSFQSRW RRQVSGNVRE KFVLLDGERV BACU002182/1-294 TLAQQLGVNP WATENLDIRV VRGCSFQSRW RRQVSGNVRE KFVLLDGERV ENSTTRP00000007740/1-489 ILAQQLGVNP WATENLDIRV VRGCSFQSRW CRQVSGNVRE KFVLLDGERV bmy_06426T0/1-496 TLAQQLGVNP WATENLDIRV VRGCSFQSRW RRQVSGNVRE KFVLLDGERV 251 300 ENSP00000263266/1-478 ISGSYSFTWS DARLHRGLVT LLTGEIVDAF SLEFRTLYAA SCPLPPAPPQ ENSBTAP00000054778/1-497 ISGSYSFTWS DSRLHRGLVT LLTGEITDAF SREFRTLYAA SGPLPPAPTP BACU002182/1-294 ISGSYRL--- ---------S LLI------- ---------- ---------- ENSTTRP00000007740/1-489 ISGSYSFTWS DSRLHRGLVT LLTGEIADAF SQEFRTLYAA SWPLPPAPTP bmy_06426T0/1-496 ISGSYSFTWS DSRLHRGLVT LLTGEIADAF SREFRTLYAA SWPLPPAPTP 301 350 ENSP00000263266/1-478 KPSV--IGGL QRGRSPHRVS RRRSVAPASP PP-PDGPLAH RLAACRV--- ENSBTAP00000054778/1-497 GPFVRTLGGL QLAHSPHRVA HRCSVAPLSP PPPPDGSLTQ RLAACRVFEG BACU002182/1-294 ---------- ---------- ---------- ---------- ----CKM--- ENSTTRP00000007740/1-489 GPFVRALGGL QLAYSPHHVA RRCSVAPLLP PPLPDGSLAQ RLAACQV--- bmy_06426T0/1-496 GPFVRALGGL QLAYSPHRVA RRCSVAPLSP PPLPDGSLAH RLAACRVFEG 351 400 ENSP00000263266/1-478 ----SPATPG PALSDILRSV QRARTPSGPP ARPSRSMWDL S-RLSQLSGS ENSBTAP00000054778/1-497 DRQETLAAPG PALSDILRSV QRARIPSGPP TRPSRSLWDL S-RLSQLSGS BACU002182/1-294 ---------- ---------- -----GLNPL LGREGVLWQN SLALALLLGC ENSTTRP00000007740/1-489 ----SLAKPG PALSDILRSV QRARTPSGPL AQHSRSLWDL S-RLSQLSGS bmy_06426T0/1-496 DRQKTLAKPG PALSDILRSV QRARTPSGPL AQPSRSLWDL S-RLSQLSGS 401 450 ENSP00000263266/1-478 SDGDN-ELKK SWGSKDTPAK ALMRQRGTGG GPWGEVDSRP -----PWGGA ENSBTAP00000054778/1-497 SDGDNDELKK SWGSKDTPAK ALMRQRGAGG APGGEADTRP LAWSQPWGGP BACU002182/1-294 LVA------- ---------- ---------- ---------- ------WG-- ENSTTRP00000007740/1-489 SDGDN-ELKK FWGSKDTPAK ALMRQRGAGG APGGEADSGP LAPSQPWGGP bmy_06426T0/1-496 SDGDN-ELKK SWGSKDTPAK ALMRQRGTGG APGGEADSGP LARSQPRGGP 451 500 ENSP00000263266/1-478 LPLPPAHRLR YLSPARRRFG GDATFKLQEP RGVRPSDWAP RAGLGGQP ENSBTAP00000054778/1-497 LPLTPGHRLR YLSPTRRRFG KDAASKLLEP RGIRQPDGAT QPGLRGQL BACU002182/1-294 ---------- ---------- ---------- ---------- -------- ENSTTRP00000007740/1-489 LPLIPARRLH YPSPTRRRFG EDAASKLPEP RGIRQPDRAA QPGLRGQR bmy_06426T0/1-496 LPVIPARRLH YLSPTRRQFG EDAASKLPEP RGIRQPDRAA QPGLRGRR