KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 4 Type: P Thu May 15 18:24:58 2014 Check: 00 .. Name: ENSBTAP00000054781/1-473 Len: 477 Check: 3985 Weight: 1.00 Name: bmy_21457T0/1-305 Len: 477 Check: 6713 Weight: 1.00 Name: ENSP00000303766/1-453 Len: 477 Check: 4083 Weight: 1.00 Name: ENSTTRP00000003665/1-453 Len: 477 Check: 6571 Weight: 1.00 // 1 50 ENSBTAP00000054781/1-473 TASKPYTLLK LTSKGAATPP SAKAGDSGAE ALPGGLSPES PQEGRCPPRP bmy_21457T0/1-305 ---------- ---------- ---------- ---------- ---------- ENSP00000303766/1-453 MQARALLLAA LAALALAREP ---------- --PAAPCPAR CDVSRCPSPR ENSTTRP00000003665/1-453 MQARALVLAA LVALALAREP ---------- --LATSCPAR CDVSRCPSPR 51 100 ENSBTAP00000054781/1-473 PVXCPGGYVP DLCNCCLVCA ATEGEPCGRP VDSPCGESLE CVRGLCRCRW bmy_21457T0/1-305 ---MLGHFPE TIERHQLQSW TLQAEPS--- ---------- ---------- ENSP00000303766/1-453 ---CPGGYVP DLCNCCLVCA ASEGEPCGGP LDSPCGESLE CVRGLCRCRW ENSTTRP00000003665/1-453 ---CPGGYVP DLCNCCLVCA AVEGEPCGRA VDSPCGESLE CVRGLCRCRW 101 150 ENSBTAP00000054781/1-473 ANAVCGTDGH TYANVCALQA ASRRALQLSG TPVRQLQKGA CPSASAGLHQ bmy_21457T0/1-305 ---------- ---------- --------LF TSIREQAPGS SAST--GLHQ ENSP00000303766/1-453 SHAVCGTDGH TYANVCALQA ASRRALQLSG TPVRQLQKGA CPL---GLHQ ENSTTRP00000003665/1-453 AHAVCGTDGH TYANVCALQA ASRRALQLSG TPVRQLQKGA CPS---GLHQ 151 200 ENSBTAP00000054781/1-473 LTSPRYKFNF IADVVEKIAP AVVHIELFLS GPCSDRLAAV ALGRAPVPDP bmy_21457T0/1-305 LTSPRYKFNF IADVVEKIAP AVVHIELFLR HPLFGRNVPL SSGSGFIT-S ENSP00000303766/1-453 LSSPRYKFNF IADVVEKIAP AVVHIELFLR HPLFGRNVPL SSGSGFIM-S ENSTTRP00000003665/1-453 LTSARYKFNF IADVVEKIAP AVVHIELFLR HPLFGRNVPL SSGSGFIM-S 201 250 ENSBTAP00000054781/1-473 DEGLRV---R CTPCRSALRG -GRLGLAVSS GRRHQAGAMG EAQKSRKGLL bmy_21457T0/1-305 EAGLIVTNAH VVSSANAVSG RQQLKVQLQN GDTYEATIKD IDKKSDIATI ENSP00000303766/1-453 EAGLIITNAH VVSSNSAAPG RQQLKVQLQN GDSYEATIKD IDKKSDIATI ENSTTRP00000003665/1-453 EAGLIVTNAH VVSSTNTVSG RQQLKVQLQN GDTYEATIKD IDKKSDIATI 251 300 ENSBTAP00000054781/1-473 SPGHHPQKKL PALLLGHSAD LRPGEFVVAI GSPFALQNTV TTGIVSTAQR bmy_21457T0/1-305 KI--HPKKKL PALLLGHSAD LRPGEFVVAI GSPFALQNTV TTGI------ ENSP00000303766/1-453 KI--HPKKKL PVLLLGHSAD LRPGEFVVAI GSPFALQNTV TTGIVSTAQR ENSTTRP00000003665/1-453 KI--HPKKKL PALLLGHSAD LRPGEFVVAI GSPFALQNTV TTGIVSTAQR 301 350 ENSBTAP00000054781/1-473 DGRELGLRDS DMDYIQTDAI INYGNSGGPL VNLDGEVIGI NTLKVAAGIS bmy_21457T0/1-305 ---------- ---------- --YGNSGGPL VNLDGEVIGI NTLKVAAGIS ENSP00000303766/1-453 EGRELGLRDS DMDYIQTDAI INYGNSGGPL VNLDGEVIGI NTLKVTAGIS ENSTTRP00000003665/1-453 DGRELGLRDS DMDYIQTDAI INYGNSGGPL VNLDGEVIGI NTLKVAAGIS 351 400 ENSBTAP00000054781/1-473 FAIPSDRITR FLSEFQDKTG KEAADWKKRF IGIRMRTITP SLVEELKASN bmy_21457T0/1-305 FAIPSDRITR FLTEFQDKHG K---DWKKRF IGIRMRTITP ---------- ENSP00000303766/1-453 FAIPSDRITR FLTEFQDKQI K---DWKKRF IGIRMRTITP SLVDELKASN ENSTTRP00000003665/1-453 FAIPSDRITR FLTEFQDKHG K---DWKKRF IGIRMRTITP SLVEELKASN 401 450 ENSBTAP00000054781/1-473 PDFPAVSSGI YVQEVVPNSP SQRGGIQDGD IIVKVNGRPL ADSSELQEAV bmy_21457T0/1-305 ---------- ---------- --RGGIQDGD IIVKVNGRPL ADSSELQEAV ENSP00000303766/1-453 PDFPEVSSGI YVQEVAPNSP SQRGGIQDGD IIVKVNGRPL VDSSELQEAV ENSTTRP00000003665/1-453 PDFPAVSSGI YVQEVVPNSP SQRGGIQDGD IIVKVNGRPL ADSSELQEAV 451 500 ENSBTAP00000054781/1-473 LTESPLLLEV RRGNDDLLFS IAPEVVL bmy_21457T0/1-305 LTESPLLLQV RRGNDDLLFS IVPEVVL ENSP00000303766/1-453 LTESPLLLEV RRGNDDLLFS IAPEVVM ENSTTRP00000003665/1-453 LTESPLLLQV RRGNDDLLFS IVPEVVL