KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 4 Type: P Thu May 15 18:25:03 2014 Check: 00 .. Name: bmy_15760T0/1-252 Len: 395 Check: 6916 Weight: 1.00 Name: ENSTTRP00000008374/1-312 Len: 395 Check: 6412 Weight: 1.00 Name: BACU019505/1-314 Len: 395 Check: 7948 Weight: 1.00 Name: ENSBTAP00000054820/1-150 Len: 395 Check: 4221 Weight: 1.00 // 1 50 bmy_15760T0/1-252 GADGRGGQQG RARGGWLERR SSREVRESFF GGAAGSGHVP RSQAARRGRR ENSTTRP00000008374/1-312 ---------- ---------- ---------- -----MSH-S KQPGA----- BACU019505/1-314 ---------- ---------- ---------- -----MSHGP KQPGA----- ENSBTAP00000054820/1-150 ---------- ---------- ---------- -----MSHGP KQPGA----- 51 100 bmy_15760T0/1-252 CFCLNPRILT LSEPSSEGGL RPLAANSAVG VGEWGVTLAS HGSRPASGKA ENSTTRP00000008374/1-312 ---------- ---------- ---------- ---------- -AAAPASGKA BACU019505/1-314 ---------- ---------- ---------- ---------- -AAAPASGKA ENSBTAP00000054820/1-150 ---------- ---------- ---------- ---------- -ASAPASGKA 101 150 bmy_15760T0/1-252 PGQHGGFVVA VKQERGEGPR AGEKGSHEEE PVKKRGWPKG KKRKKILPNG ENSTTRP00000008374/1-312 PGQHGGFVVA VKQERGEGLR AGEKGSHEEE PVKKRGWPKG KKRKKILPNG BACU019505/1-314 PGQHGGFVVA VKQERGEGPR AGEKGSHEEE PVKKRGWPKG KKRKKILPNG ENSBTAP00000054820/1-150 PGQHGSFVVA VKQERGEGPR AGEKGSHEEE PVKKRGWPKG KKRKKILPNG 151 200 bmy_15760T0/1-252 PKAPVTGYVR FLNERREQIR TRHPDLPFPE ITKMLGAEWS KLQPAEKQRY ENSTTRP00000008374/1-312 PKAPVTGYVR FLNERREQIR TRHPDLPFPE ITKMLGAEWS KLQPAEKQRY BACU019505/1-314 PKAPVTGYVR FLNERREQIR TRHPDLPFPE ITKMLGAEWS KLQPAEKQRY ENSBTAP00000054820/1-150 PKAPVTGYVR FLNERREQIR TRHPDLPFPE ITKMLGAEWS KLQPAEKQRY 201 250 bmy_15760T0/1-252 LDEAEREKQQ YMKELRAYQQ SEAYKMCTEK IQEKKIKK-- ---------- ENSTTRP00000008374/1-312 LDEAEREKQQ YMKELRAYQQ SEAYKMCTEK IQEKKIKK-E XXXXXXXXXX BACU019505/1-314 LDEAEREKQQ YMKELRAYQQ SEAYKMCTEK IQEKKIKKGR GNSTCRAKRG ENSBTAP00000054820/1-150 LDEAEREKQQ YMKELRAYQQ SEAYKMCAEK I--------- ---------- 251 300 bmy_15760T0/1-252 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000008374/1-312 XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX BACU019505/1-314 VRGDLGGSPC PPPSPTRGLQ LRAHEYPFEW TQGKRQDLTR LPAYSAGGGA ENSBTAP00000054820/1-150 ---------- ---------- ---------- ---------- ---------- 301 350 bmy_15760T0/1-252 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000008374/1-312 XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX BACU019505/1-314 AAPAEDERGL RGAERGAAEA HAEHEQRARA LGAGAGARGT ADTGAAAATP ENSBTAP00000054820/1-150 ---------- ---------- ---------- ---------- ---------- 351 400 bmy_15760T0/1-252 ---------- ---------- GAKGPSPQAA ECLL------ ----- ENSTTRP00000008374/1-312 XXTGETPTLS TLDFYMARLH GAIERDPAQH EKLIVRIKEI LAQVA BACU019505/1-314 RGTGETPTLS TLDFYMARLH GAIERDPAQH EKLIVRIKEI LAQVA ENSBTAP00000054820/1-150 ---------- ---------- ---------- ---------- -----