KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 18:25:05 2014 Check: 00 .. Name: ENSBTAP00000054841/1-302 Len: 356 Check: 2619 Weight: 1.00 Name: bmy_07712T0/1-343 Len: 356 Check: 5302 Weight: 1.00 Name: BACU010769/1-291 Len: 356 Check: 9551 Weight: 1.00 Name: ENSP00000344424/1-303 Len: 356 Check: 5220 Weight: 1.00 Name: ENSTTRP00000011205/1-300 Len: 356 Check: 8480 Weight: 1.00 // 1 50 ENSBTAP00000054841/1-302 WRPPSPWAA- -PGSLLPQLV SIPVPPALRY RLPFSLFRGS S--------- bmy_07712T0/1-343 ----MRMYP- --GPLSWGQA SV-TGAVAPS ELPLSVAGGS LAGKPHHCTS BACU010769/1-291 MLVEADIQKF LKQPFFFSLP ES-----LPY PIPKT----- ---------- ENSP00000344424/1-303 -MCHGRIAP- -KSTSVFAVA SVGHGVFLPL VILCTLLGDG LA-------- ENSTTRP00000011205/1-300 -MCHGRIAP- -KSTSLFAAA SAGHGVFLLL VILSTLLGDG LA-------- 51 100 ENSBTAP00000054841/1-302 -----AVCSL PPEPENGGYI CHPRPCRDPL NSGSVIEYLC AEGYMLKGDY bmy_07712T0/1-343 ALSVFAVCSL PPEPENGGYI CHPRPCRDPL NSGSVIEYLC AEGYMLKGDY BACU010769/1-291 -----RVCSL PPEPENGGYI CHPRPCRDPL NSGSVIEYLC AEGYMLKGDY ENSP00000344424/1-303 -----SVCPL PPEPENGGYI CHPRPCRDPL TAGSVIEYLC AEGYMLKGDY ENSTTRP00000011205/1-300 -----SVCSL PPEPENGGYI CHPRPCRDPL NSGSVIEYLC AEGYMLKGDY 101 150 ENSBTAP00000054841/1-302 KYLTCKNGEW KPAMEISCRL NEDKDIHTSL GVPTLSIVAS TASSVALILL bmy_07712T0/1-343 KYLTCKNGEW KPAMEISCHL NEDKDAHTSL GVPTLSIVAS TASSVALILL BACU010769/1-291 KYLTCKNGEW KPAMEISCHL NEDKDAHTSL GVPTLSIVAS TASSVALILL ENSP00000344424/1-303 KYLTCKNGEW KPAMEISCRL NEDKDTHTSL GVPTLSIVAS TASSVALILL ENSTTRP00000011205/1-300 KYLTCKNGEW KPAMEISCHL NEDKDAHTSL GVPTLSIVAS TASSVALILL 151 200 ENSBTAP00000054841/1-302 LVVLFVLLQP KLKSFHHSRR RRDQGVSGDQ VSIMVDGVQV ALPSYEEAVY bmy_07712T0/1-343 LVVLFVLLQP KLKSFHHS-- RRDQGVSGDQ VSIMVDGVQV ALPSYEEAVY BACU010769/1-291 LVVLFVLLQP KLKSFHHS-- RRDQGVSGDQ VSIMVDGVQV ALPSYEEAVY ENSP00000344424/1-303 LVVLFVLLQP KLKSFHHS-- RRDQGVSGDQ VSIMVDGVQV ALPSYEEAVY ENSTTRP00000011205/1-300 LVVLFVLLQP KLKSFHHS-- RRDQGVSGDQ VSIMVDGVQV ALPSYEEAVY 201 250 ENSBTAP00000054841/1-302 GSSGHCVPPA DPRVQIVLSE GSGPSGRSGM REPHPQDQGA CSSAGSEEEA bmy_07712T0/1-343 GSSGHCVPPA DPRVQIVLSE GSGPGGRSGP REQQLQDQGA CSSAGGEEAA BACU010769/1-291 GSSGHCVPPA DPRVQIVLSE GSGPGGRSGP REQQLQEQGA CSSAGGEEAA ENSP00000344424/1-303 GSSGHCVPPA DPRVQIVLSE GSGPSGRSVP REQQLPDQGA CSSAGGEDEA ENSTTRP00000011205/1-300 GSSGHCVPPA DPRVQIVLSE GSGPSGRSGP REQQLQDQGA CSSAGGEEEA 251 300 ENSBTAP00000054841/1-302 PGQSGLCEAW GSRGSETVMV HQATTSSWVA GSGNSRAAHK EAPDSENSDI bmy_07712T0/1-343 PGQSGLCEAR GSRGSETVMV HQAAPASWVA GSGNSRVAHK EAPDSENSDI BACU010769/1-291 PGQPGLCEAR GSRGSETVMV HQAAPASWVA GSGNSRVAHK EAPDAENSDI ENSP00000344424/1-303 PGQSGLCEAW GSRASETVMV HQATTSSWVA GSGNRQLAHK ETADSENSDI ENSTTRP00000011205/1-300 PGQPGLCEAR GSRGSETVMV HQAAPSSWVA GSGNSRVAHK EAPDSENSDI 301 350 ENSBTAP00000054841/1-302 Q---SLASED YTD------- ---------- ---------- --------DI bmy_07712T0/1-343 Q---SLTSED YTDGSGPPTA ALEWGLAERQ GGAGGRQRGL EQSLCLTREL BACU010769/1-291 Q---SLTSED YTD------- ---------- ---------- --------DI ENSP00000344424/1-303 QSLLSLTSEE YTD------- ---------- ---------- --------DI ENSTTRP00000011205/1-300 Q---SLTSED YTD------- ---------- ---------- --------DI 351 400 ENSBTAP00000054841/1-302 PLLKEA bmy_07712T0/1-343 QVEEKH BACU010769/1-291 PLLKEA ENSP00000344424/1-303 PLLKEA ENSTTRP00000011205/1-300 PLLKEA