KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 4 Type: P Thu May 15 18:25:07 2014 Check: 00 .. Name: ENSP00000444617/1-1225 Len: 1306 Check: 7190 Weight: 1.00 Name: ENSBTAP00000054861/1-861 Len: 1306 Check: 4210 Weight: 1.00 Name: bmy_17132T0/1-1285 Len: 1306 Check: 5405 Weight: 1.00 Name: BACU011394/1-1101 Len: 1306 Check: 6238 Weight: 1.00 // 1 50 ENSP00000444617/1-1225 MPFYRRTVVP QRLCPRNPPQ QLAELRDVSH LAALSLLRQL A--------- ENSBTAP00000054861/1-861 ---------- ---------- ---------- ---------- ---------- bmy_17132T0/1-1285 MGSWGPLEEP GAAAGRAGGR ATPTGARARR LGPGRVTSSR GAQREGGGGS BACU011394/1-1101 ---------- ---------- ---------- ---------- ---------- 51 100 ENSP00000444617/1-1225 ---------- ---------- ---------- --DLCGHSLA LLEDLEGHLL ENSBTAP00000054861/1-861 ---------- ---------- ---------- ---------- ---------- bmy_17132T0/1-1285 REAPGGGGGR RGSEAKIWRA EAGGEGENGL RHDLSRKNLA SGASPPFKRG BACU011394/1-1101 ---------- ---------- ---------- ---------- ---------- 101 150 ENSP00000444617/1-1225 ALGRRTDSLY RRTVRLRRRL PCRLLGPEED EEELAAANSG RENATATAHS ENSBTAP00000054861/1-861 ---------- ---------- ---------- ---------- ---------- bmy_17132T0/1-1285 RGGSWGTAGA HWPPRAAPGP PLAGGASHCL SPSLAAANSG RENATATAHS BACU011394/1-1101 ---------- ---------- ---------- ---------- ------XAHS 151 200 ENSP00000444617/1-1225 RSSWRQPVNV FLSSGRPPSV EELLREAQLN LQSLLQ---- ---------- ENSBTAP00000054861/1-861 ---------- ---------- ---------- ---------- ---------- bmy_17132T0/1-1285 RSSWRQPVNV FLSSGRPPSV EELLREAQLN LQSLLQGTER EGGCGRSPRA BACU011394/1-1101 RSSWRQPVNV FLSSGRPPSV EELLREAQLN LQSLLQ---- ---------- 201 250 ENSP00000444617/1-1225 ---------- ---------- ---EEYEEQY SEARLVGQTF RSSDEATKPT ENSBTAP00000054861/1-861 ---------- ---------- ---------- ---------- ---------- bmy_17132T0/1-1285 RCIASGGRRR RKRTGTRERK RENKEYEEQY SEARLLGQTF RSADEAPEPT BACU011394/1-1101 ---------- ---------- ---EEYEEQY SEARLLGQTF RSADEAPEPT 251 300 ENSP00000444617/1-1225 PNPRPQSARR LEFILMPTKR QLSEDETTTQ GVRAPEASLS LSTTADKQTA ENSBTAP00000054861/1-861 ---------- ---------- ---------- ---------- ---------- bmy_17132T0/1-1285 PSPRPQSARR LEFVLMPTKR QLSEDETTMQ GVRAPEASLN LPTTADKQAA BACU011394/1-1101 PSPRPQSARR LEFVLMPTKR QLSEDETTMQ GVRAPEASLN LPTTADKQAA 301 350 ENSP00000444617/1-1225 WNSLFPLPIL EEKRWPQLCS TQSDIVPINI SGQQFDKHAS LRHSLFNTET ENSBTAP00000054861/1-861 ---------- ---------- ---------- ---------- ---------- bmy_17132T0/1-1285 WNSPFPLPVL EEKRWLQPCP THSDIVPINV SGQQFDKHAS LRHSLFNTET BACU011394/1-1101 WNSPFPLPVL EEKRWLQPCP THSDIVPINV SGQQFDKHAS LRHSLFNTET 351 400 ENSP00000444617/1-1225 AVNPKSTLRR RRTIIGFSNF SQRDQGHSNS PAGSVAHSTT SDIRPSHSVP ENSBTAP00000054861/1-861 ---------- ---------- ---------- ---------- ---------- bmy_17132T0/1-1285 AVNPKSTLRR RRTIIGFSNY SQRDQGHSNS PTGSVARSTT SDIKPSHSVP BACU011394/1-1101 AVNPKSTLRR RRTIIGFSNY SQRDQGHSNS PTGSVARSTT SDIKPSHSVP 401 450 ENSP00000444617/1-1225 EGVHGRVAVG QDARFPSLTS PVLRTPSSEP DEPHQARSGP NPPGMESMGM ENSBTAP00000054861/1-861 ---------- ---------- ---------- ---------- ----MESMGM bmy_17132T0/1-1285 GGVHGRVAIG QEAQLSNLTS PVLRNPSSDP EEPLQARGGT KVPGMESMGM BACU011394/1-1101 GGVHGRVAIG QEAQLSNLTS PVLRNPSSDP EEPLQARGGT KVPGMESMGM 451 500 ENSP00000444617/1-1225 VYSVPSSCNG PTESTFSTSW KGDAFTYMTP SATSQSNQVN ENGKNPSCGN ENSBTAP00000054861/1-861 VYSIPGSCNG PTESTFSASR KGDAFTYVTP SATAQSSQVN ENGKSPSSGN bmy_17132T0/1-1285 VYSVPSSCNG PTESTFSPSW KGDAFTYVTP SATAQSSQDN ENGKSPSSGN BACU011394/1-1101 VYSVPSSCNG PTESTFSPSW KGDAFTYVTP SATAQSSQDN ENGKSPSSGN 501 550 ENSP00000444617/1-1225 SWVSLNKVPP LVPKEAATLL VARDNPAGCS GSAGYPERLI QQRHMPERPS ENSBTAP00000054861/1-861 SWVSLHTLPP LVPKEAATLF VTRDIPAGCS GPAGYSQHPA QRSQVSERPS bmy_17132T0/1-1285 SWISLHTLPP LVPKEAATFF VTRDTPAGCS GSAGYSEHFT QRRHVSERPS BACU011394/1-1101 SWISLHTLPP LVPKEAATFF VTRDTPAGCS GSAGYSEHST QRRHVSERPS 551 600 ENSP00000444617/1-1225 KIGLLTSGTS RLETGPGGAS RFRERSLSVP TDSGTTDVDY DEEQKANEAC ENSBTAP00000054861/1-861 KIGLLTGGTS RLETGPGGAS KFRERSLSVP TDTGTMDVDY EEEQKASEAC bmy_17132T0/1-1285 KIGLLTGDTS RLETGPGGAS RFRERSLSVP TDTGTTDVDY DEEQKASEAC BACU011394/1-1101 KIGLLTGDTS RLETGPGGAS RFRERSLSVP TDTGTTDVDY DEEQKASEAC 601 650 ENSP00000444617/1-1225 ALPFASTSSE GSNSADNIAS LSAQQEAQHR RQRSKSISLR KAKKKPSPPT ENSBTAP00000054861/1-861 ALPYASTSSE GSNSADNIAS LSAQQEAHHR RQRSKSISLK KAKKKPSPPT bmy_17132T0/1-1285 ALPYAGTSSE GSNSADNIAS LSAQQEAQQR RQRSKSISLK KAKKKPSPPT BACU011394/1-1101 ALPYASTSSE GSNSADNIAS LSAQQEAQQR RQRSKSISLK KAKKKPSPPT 651 700 ENSP00000444617/1-1225 RSVSLVKDEP GLLPEGGSAL PKDQRPKSLC LSLEHQGHHS SHPDAQGHPA ENSBTAP00000054861/1-861 RSVSLVKDEP VLLPEGGSVL PKDQRPRSLC LSLEHQGHHS SHPDTQGHPA bmy_17132T0/1-1285 RSVSLVKDEP VLLPEGGSAL PKDQRPRSLC LSLEHQGHHS SHPDTQGHPA BACU011394/1-1101 RSVSLVKDEP VLLPEGGSAL PKDQRPRSLC LSLEHQGHHS SHPDTQGHPA 701 750 ENSP00000444617/1-1225 IPNHKDPEST QFSHHWYLTD WKSGDTYQSL SSSSTATGTT VIECTQVQGS ENSBTAP00000054861/1-861 VPTFKDPEGT QFAHHWYLTD WKSGDTYQSL SSSSTATGTT VIECTQVQGS bmy_17132T0/1-1285 VPTFKDPEGT QFAHHWYLTD WKSGDTYQSL SSSSTATGTT VIECTQVQGS BACU011394/1-1101 VPTFKDPEGT QFAHHWYLTD WKSGDTYQSL SSSSTATGTT VIECTQVQGS 751 800 ENSP00000444617/1-1225 SESLASPSTS RATTPSQLSI EVEAREISSP GRPPGLMSPS SGYSSQSETP ENSBTAP00000054861/1-861 SESLASPSTS RATTPSQLSI EVEAREVSSP GRPTGLMSPS SGYSSQSETP bmy_17132T0/1-1285 SESLASPSTS RATTPSQLSI EVEAREVSSP GRPTGLMSPS SGYSSQSETP BACU011394/1-1101 SESLASPSTS RATTPSQLSI EVEAREVSSP GRPTGLMSPS SGYSSQSETP 801 850 ENSP00000444617/1-1225 TPTVSMSLTL GHLPPPSSSV RVRPVVPERK SSLPPTSPME KFPKSRLSFD ENSBTAP00000054861/1-861 TPTVSMSLTL GHLPPPSSSV RVRPVVPERK SSLPPTSPME KMSKSRLSFD bmy_17132T0/1-1285 TPTVSMSLTL GHLPPPSGSV RVRPVVPERK SSLPPTSPVE KMSKSRLSFD BACU011394/1-1101 TPTVSMSLTL GHLPPPSSSV RVRPVVPERK SSLPPTSPVE KMSKSRLSFD 851 900 ENSP00000444617/1-1225 LPLTSSPNLD LSGMSISIRS KTKVSRHHSE TNFGVKLAQK TNPNQPIMPM ENSBTAP00000054861/1-861 LPLTSSTNLD LSGMSISIRS KNKVSQHHSD TNLGAKLAQK TSPNQPIMPM bmy_17132T0/1-1285 LPLTSSTNLD LSGMSISIRS KTKVSRHHSD TNFGAKLAQK TSPNQPIMPX BACU011394/1-1101 LPLTSSTNLD LSGMSISIRN KTKVSRHHSD TNFGAKLAQK TSPNQPIMPM 901 950 ENSP00000444617/1-1225 VTQSDLRSVR LRSVSKSEPE DDIESPEYAE EPRAEEVFTL PERKTKPPVA ENSBTAP00000054861/1-861 VTQSDLRSVR LRSVSKSELE DDTESPDYAE ESGA-EVFTL PERKMKPPIA bmy_17132T0/1-1285 VTQSDLRSVR LRSVSKSEPE DDIESPDYXE ESGA-EVFTL PERKAKPPIA BACU011394/1-1101 VTQSDLRSVR LRSVSKSEPE DDIESPDYAE ESGA-EVFTL PERKAKPPIA 951 1000 ENSP00000444617/1-1225 EKPPVARRPP SLVHKPPSVP EEYALTSPTL AMPPRSSIQH ARPLPQDSYT ENSBTAP00000054861/1-861 EKPPLARRPP SLVHKPPSVP EEYPLTSPTL AMTPKSSIQH IRPLPQDIYT bmy_17132T0/1-1285 EKPPLARRPP SLVHKPPSVP EEYPLTSPTL AMTPKTSIQH MRPLPQDIYT BACU011394/1-1101 EKPPLARRPP SLVHKPPSVP EEYPLTSPTL AMTPKTSIQH MRPLPQDIYT 1001 1050 ENSP00000444617/1-1225 VVRKPKPSSF PDGRSPGEST APSSLVFTPF ASSSDAFFSG TQQPPQGSVE ENSBTAP00000054861/1-861 VVRKSKSSSF PESRSPGEST APSSLVFTPF ASSSGAFFSG TQQPPQGSME bmy_17132T0/1-1285 VVRKPKSSSF PEGRTLGEST APSSLVFTPF SSSSGAFFSG TQQPPQGSTE BACU011394/1-1101 VVRKPKSSSF PEGRTLGEST APSSLVFTPF SSSSGAFFSG TQQPPQGSTE 1051 1100 ENSP00000444617/1-1225 DEGPKVRVLP ERISLQSQEE AEKKKGKIPP PVPKKPSVLY LPLTSPTAQM ENSBTAP00000054861/1-861 DEGPKGRALP ERISLQSQEE AEKKKGKIPP PVPKKPSVLY LPLTSPMAQA bmy_17132T0/1-1285 DEGPKGRALP ERISLQSQEE AEKKKGKIPP PVPKKPSVLY LPLTSPTTQM BACU011394/1-1101 DEGPKGRALP ERISLQSQEE AEKKKGKIPP PVPKKPSVLY LPLTSPTTQM 1101 1150 ENSP00000444617/1-1225 EAYVAEPRLP LSPIITLEED TKCPATGDDL QSLGQRVTST PQADSEREAS ENSBTAP00000054861/1-861 EAYVTEPRLP LSPIITLEED AKCLPTDDHL PSAGTRMTSR PQSNSEREAS bmy_17132T0/1-1285 EAYTAEPRLP LSPIITLEED AKCLPTSDHL PSAGTRTTST PQADSEREAS BACU011394/1-1101 EAYTAEPRLP LSPIITLEED AKCLPTSDHL PSTG------ ---------- 1151 1200 ENSP00000444617/1-1225 P--LGSSVEP GTEEKSLISD KTAEWIAEDD DDVFVASRTT EDLFTVIHRS ENSBTAP00000054861/1-861 PPGLGSLMEP STEEKSVISD KTAEWIAEDD DDVFVASRTT EDLFTVIHRS bmy_17132T0/1-1285 P--------- ---------- -LAEWIAEDD DDVFVASRTT EDLFTVIHRS BACU011394/1-1101 -----SSMEP STEEKSVISD KTAEWIVEDD DDVFVASRTT EDLFTVIHRS 1201 1250 ENSP00000444617/1-1225 KRKLLGWKEP GEAFVGG-RT SSHSPIKNTA ESPISESTAT AGSGSSANLD ENSBTAP00000054861/1-861 KRKLLGWKEP GETFAGSSRP SSHSPVRNPP ESPVSELAAS SGSSGSANLD bmy_17132T0/1-1285 KRKLLGWKEP GEAFAGGSRP TSHSPIRNTA ESPISELAAS AGSSGSASLD BACU011394/1-1101 KRKLLGWKEP GEAFAGGSRP TSHSPIRNTA ESPISELAAS AGSSGSASLD 1251 1300 ENSP00000444617/1-1225 AGRNDDFKAL LQKKGSKATP RSRPSAAELL KTTNPLARRI IAQFSKDYET ENSBTAP00000054861/1-861 AGRNDDFKAL LQKKGSKATP RSRPSAAELL KTTNPLARRI IAQFSKDYKT bmy_17132T0/1-1285 AGRNDDFKAL LQKKGSKATP RSRPSAAELL KTTNPLARRI IAQFSKDYET BACU011394/1-1101 AGRNDDFKAL LQKKGSKATP RSRPSAAELL KTTNPLARRI IAQFSKDYET 1301 1350 ENSP00000444617/1-1225 TDNPST ENSBTAP00000054861/1-861 PDNPST bmy_17132T0/1-1285 PDNPST BACU011394/1-1101 PDNPST