KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 18:25:08 2014 Check: 00 .. Name: ENSP00000332444/1-616 Len: 668 Check: 748 Weight: 1.00 Name: ENSBTAP00000054873/1-632 Len: 668 Check: 2355 Weight: 1.00 Name: ENSTTRP00000003127/1-609 Len: 668 Check: 3526 Weight: 1.00 Name: BACU009896/1-649 Len: 668 Check: 7602 Weight: 1.00 Name: bmy_16046T0/1-641 Len: 668 Check: 5031 Weight: 1.00 // 1 50 ENSP00000332444/1-616 MSSLAVRDPA MDRSLRSVFV GNIPYEATEE QLKDIFSEVG SVVSFRLVYD ENSBTAP00000054873/1-632 MSSLAVRDPA MDRSLRSVFV GNIPYEATEE QLKDIFSEVG SVVSFRLVYD ENSTTRP00000003127/1-609 MSSLTVRDPA MDRSLRSVFV GNIPYEATEE QLKDIFSEVG SVVSFRLVYD BACU009896/1-649 ---------- MDRSLRSVFV GNIPYEATEE QLKDIFSEVG SVVSFRLVYD bmy_16046T0/1-641 MSSLTVRDPA MDRSLRSVFV GNIPYEATEE QLKDIFSEVG SVVSFRLVYD 51 100 ENSP00000332444/1-616 RETGKPKGYG FCEYQDQETA LSAMRNLNGR EFSGRALRVD NAASEKNKEE ENSBTAP00000054873/1-632 RETGKPKGYG FCEYQDQETA LSAMRNLNGR EFSGRALRVD NAASEKNKEE ENSTTRP00000003127/1-609 RETGKPKGYG FCEYQDQETA LSAMRNLNGR EFSGRALRVD NAASEKNKEE BACU009896/1-649 RETGKPKGYG FCEYQDQETA LSAMRNLNGR EFSGRALRVD NAASEKNKEE bmy_16046T0/1-641 RETGKPKGYG FCEYQDQETA LSAMRNLNGR EFSGRALRVD NAASEKNKEE 101 150 ENSP00000332444/1-616 LKSLGPAAPI IDSPYGDPID PEDAPESITR AVASLPPEQM FELMKQMKLC ENSBTAP00000054873/1-632 LKSLGPAAPI IDSPYGDPID PEDAPESITR AVASLPPEQM FELMKQMKLC ENSTTRP00000003127/1-609 LKSLGPAAPI IDSPYGDPID PEDAPESITR AVASLPPEQM FELMKQMKLC BACU009896/1-649 LKSLGPAAPI IDSPYGDPID PEDAPESITR AVASLPPEQM FELMKQMKLC bmy_16046T0/1-641 LKSLGPAAPI IDSPYGDPID PEDAPESITR AVASLPPEQM FELMKQMKLC 151 200 ENSP00000332444/1-616 VQNSHQEARN MLLQNPQLAY ALLQAQVVMR IMDPEIALKI LHRKIHVTPL ENSBTAP00000054873/1-632 VQNSHQEARN MLLQNPQLAY ALLQAQVVMR IMDPEIALKI LHRKIHVTPL ENSTTRP00000003127/1-609 VQNSHQEARN MLLQNPQLAY ALLQAQVVMR IMDPEIALKI LHRKIHVTPL BACU009896/1-649 VQNSHQEARN MLLQNPQLAY ALLQAQVVMR IMDPEIALKI LHRKIHVTPL bmy_16046T0/1-641 VQNSHQEARN MLLQNPQLAY ALLQAQVVMR IMDPEIALKI LHRKIHVTPL 201 250 ENSP00000332444/1-616 IPGKSQSVSV SGPGPGPGPG LCPGPNVLLN QQNPPAPQPQ HLARRPVKDI ENSBTAP00000054873/1-632 IPGKSQSVS- -----GPGPG LCPGPNVLLN QQNPPAPQPQ HLARRPVKDI ENSTTRP00000003127/1-609 IPGKSQSVS- -----GPGPG LCPGPNVLLN QQNPPAPQPQ HLARRPVKDI BACU009896/1-649 IPGKSQSVS- -----GPAPG LCPGAX--LN QQNPPAPQPQ HLARRPVKDI bmy_16046T0/1-641 IPGKSQSVS- -----GPAPG LCPGPNVLLN QQNPPAPQPQ HLARRPVKDI 251 300 ENSP00000332444/1-616 PPLMQTPIQG GIPAPGPIPA AV--PGAGPG SLTPGGAMQP QLGMPGVGPV ENSBTAP00000054873/1-632 PPLMQTPIQG GIPPQGPMPA AV----PGPG PLTPGGTMQP QVGMPGVGPV ENSTTRP00000003127/1-609 PPLMQTPIQG GIPAPGPIPA AV--AGPGPG PLTPGGAMQP QVGMPGVGPV BACU009896/1-649 PPLMQTPIQG GIPAPGPIPA AVAGPGPGPG PLTPGGAMQP QVGMPGVGPV bmy_16046T0/1-641 PPLMQTPIQG GIPAPGPIPA AVAGPGPGPG PLTPGGAMQP QVGIPGVGPV 301 350 ENSP00000332444/1-616 PLERGQVQMS DPRAPIPRGP VTPGGLPPRG LLGDAPNDPR GGTLLSVTGE ENSBTAP00000054873/1-632 PLERGQVQIS DPRAPMPRGP MTAGGLPPRG LLGDAPNDPR GGTLLSVTGE ENSTTRP00000003127/1-609 PLERGQVQIS DPRAPMSRGP MTAGGLPPRG LLGDAPNDPR GGTLLSVTGE BACU009896/1-649 PLERGQVQIS DPRAPMSRGP MTAGGLPPRG LLGDAPNDPR GGTLLSVTGE bmy_16046T0/1-641 PLERGQVQIS DPRAPMSRGP MTAGGLPPRG LLGDAPNDPR GGTLLSVTGE 351 400 ENSP00000332444/1-616 VEPRGYLGPP HQGPPMHHAS GHDTRGPSSH EMRGGPLGDP RLLIGEPRGP ENSBTAP00000054873/1-632 VEPRGYLGPP HQGPPMHHAA GHDSRGPSSH EMRGGPLADP RMLMSEPRGP ENSTTRP00000003127/1-609 VEPRGYLGPP HQGPPMHHAS GHDSRGPSSH DMRGGPLADP RLLIGEPRGP BACU009896/1-649 VEPRGYLGPP HQGPPMHHAS GHDSRGPSSH DMRGGPLADP RMLIGEPRGP bmy_16046T0/1-641 VEPRGYLGPP HQGPPMHHAS GHDSRGPSSH DMRGGPLADP RMLIGEPRGP 401 450 ENSP00000332444/1-616 MIDQRGLPMD GRGGRDSRAM ETRAMETEVL ETRVMERRGM ETCAMETRGM ENSBTAP00000054873/1-632 MIDQRGLPMD GRGSRDSRGM ETRAMETEVL ETRVMERRGM ETCAMETRAM ENSTTRP00000003127/1-609 MIDQRGLPMD GRGSRDSRGM ETRAMETEVL ETRVMERRGM ETCAMEARGM BACU009896/1-649 MIDQRGLPMD GRGSRDSRGM ETRAMETEVL ETRVMERRGM ETCAMEARGM bmy_16046T0/1-641 MIDQRGLPMD GRGSRDSRGM ETRAMETEVL ETRVMERRGM ETCAMEARGM 451 500 ENSP00000332444/1-616 EARGMDARGL EMRGPVPSSR GPMTGGIQGP GPINIGAGGP PQGPRQVPGI ENSBTAP00000054873/1-632 EARGMDARGM EMRGPGPSSR GPMTGGIQGP GPINMGAGG- PQGPRQVPSI ENSTTRP00000003127/1-609 EARGMDARGM EMRGPGPSSR GPMTGGIQGA GPINMGAGG- PQGPRQVASI BACU009896/1-649 EARGMDARGM EMRGPGPSSR GPMTGGIQGA GPINMGAGG- PQGPRQVPSI bmy_16046T0/1-641 EARGMDARGM EMRGPGPSSR GPMTGGIQGA GPINMGAGG- PQGPRQVPSI 501 550 ENSP00000332444/1-616 SGVGNPGAGM QGTGIQGTGM QGAGIQGGGM QGAGIQGVSI Q--------- ENSBTAP00000054873/1-632 SGVGNPGPGM QGAGMQGGGM QGAGLQGAGM QGAGMQGGGM QGPGMQGAGM ENSTTRP00000003127/1-609 SGVGNPGAGM QGAGMQGAGM QGAGMQGAGM QGAGMQGAGM Q--------- BACU009896/1-649 SGVGNPGAGM QGAGMQGAGM QGAGMQGAGM QGAGMQGAGM QGAGMQGAGM bmy_16046T0/1-641 SGVGNPGAGM QGAGMQGAGM QGAGMQGAGM QGAGMQGAGM QGAGMQGAGM 551 600 ENSP00000332444/1-616 ---------- ---------- ---------- ---------- -GGGIQGGGI ENSBTAP00000054873/1-632 QGAGMQGAGM QGAGMQ---- ---------- ---------- -GAGMQGPGM ENSTTRP00000003127/1-609 ---------- ---------- ---------- ---------- -GAGMQGAGM BACU009896/1-649 QGAGMQGAGM QGAGMQGAGM QGAGMQGAGM QGAGMQGAGM QGAGMQGAGM bmy_16046T0/1-641 QGAGMQGAGM QGAGMQGAGM Q--------- ---------- -GAGMQGAGM 601 650 ENSP00000332444/1-616 QGASKQGGSQ PSSFSPGQSQ VTPQDQEKAA LIMQVLQLTA DQIAMLPPEQ ENSBTAP00000054873/1-632 QGAGKQGGGQ PSSFSPGQSQ VTPQDQEKAA LIMQVLQLTA DQIAMLPPEQ ENSTTRP00000003127/1-609 QGAGKQGGGQ PSSFSPGQSQ VTPQDQEKAA LIMQVLQLTA DQIAMLPPEQ BACU009896/1-649 QGAGKQGGGQ PSSFSPGQSQ VTPQDQEKAA LIMQVLQLTA DQIAMLPPEQ bmy_16046T0/1-641 QGAGKQGGGQ PSSFSPGQSQ VTPQDQEKAA LIMQVLQLTA DQIAMLPPEQ 651 700 ENSP00000332444/1-616 RQSILILKEQ IQKSTGAS ENSBTAP00000054873/1-632 RQSILILKEQ IQKSTGTS ENSTTRP00000003127/1-609 RQSILILKEQ IQKSTGAS BACU009896/1-649 RQSILILKEQ IQKSTGAS bmy_16046T0/1-641 RQSILILKEQ IQKSTGAS