KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 4 Type: P Thu May 15 18:25:11 2014 Check: 00 .. Name: ENSBTAP00000054900/1-708 Len: 714 Check: 8909 Weight: 1.00 Name: bmy_00611T0/1-709 Len: 714 Check: 851 Weight: 1.00 Name: ENSTTRP00000001886/1-711 Len: 714 Check: 4719 Weight: 1.00 Name: BACU005520/1-711 Len: 714 Check: 4333 Weight: 1.00 // 1 50 ENSBTAP00000054900/1-708 MARSRSRSPR WRHRSLSPVP RSSEHYKQRF EHYGYDYRKD PKRPITWRMD bmy_00611T0/1-709 --MKYNIKAV FHVRSLSPVP RNSEHYKQRP EHYGYEYRKD PKRPVTWRMD ENSTTRP00000001886/1-711 MARSRSRSPR WRHRSLSPVP RNSEHYKQRP EHYGYEYRKD PKRPVTWRMD BACU005520/1-711 MARSRSRSPR WRHRSLSPVP RNSEHYKQRP EHYGYEYRKD PKRPVTWRMD 51 100 ENSBTAP00000054900/1-708 DEKYGQSKPR ISSHENIQYR SYEHRSPSPN IRGNSSEKFY TYKPPQVYLP bmy_00611T0/1-709 NEKHGQSKPR IPSRETIHYR SYEHRSSSPN IRRNSLENFY TYKPPQVYLP ENSTTRP00000001886/1-711 NEKHGQSKPR IPSRETLHYR SYEHRSSSPN IRRNSLENFY TYKPPQVYLP BACU005520/1-711 NEKHGQSKPR IPSRETIHYR SYEHRSSSPN IRRNSLENFY TYKPPQVYLP 101 150 ENSBTAP00000054900/1-708 ERGDDSNRRA QYVPRHSEGM FYREHQRSCY PQKAQGRYIP DDRRNRRSEK bmy_00611T0/1-709 GRGDDSNRRS QYTPKYSEGV LYKEHQRNCY PQKVQGRYFP DDHRVRGSGK ENSTTRP00000001886/1-711 GRGDDSNRRS QYMPKYSEGV LYKEHQRNCY PQKVQGRYFP DDHRVRGSGK BACU005520/1-711 GRGDDSNRRS QYMPKYSEGV LYKENQRNCY PQKVQGRYFP DDHRVRGSGK 151 200 ENSBTAP00000054900/1-708 GGTPPVRSTT DSFRFEGHWH EAEPRYQRIQ DEKYSQSLRR GSEDFEKRIS bmy_00611T0/1-709 GGKPPLRSIA DSFRFEGQWH EDELRHQRIQ DEKYSQSLRR GSEDFEKRSS ENSTTRP00000001886/1-711 GGKPPLRSIA DSFRFEGQWH EDELRHQRIQ DEKYSQSLRR GSEDFEKRSS BACU005520/1-711 GGKPPLRSIA DSFRFEGQWH EDELRHQRIQ DEKYSQSLRR GSEDFEKRSS 201 250 ENSBTAP00000054900/1-708 FQKRYPEDHD FRKYGHTSKR PHDVERYENR EPARSPQWKS RHFSAPYQEK bmy_00611T0/1-709 FQTRYPEDRD FRKYGHTSKR PQDVERYENR EPARSPQWKS RHFLPSYQEK ENSTTRP00000001886/1-711 FQTRYPEDRD FRKYGHTSKR PQDVERYENR EPPRSPQWKS RHFLPSYQEK BACU005520/1-711 FQTRYPEDRD FRKYGHTSKR PQDVERYENR EPARSPQWKS RHFLTSYQEK 251 300 ENSBTAP00000054900/1-708 KDQRNLETQT YRYAPREFPE TSSAAKVSCD SRHKYRKTSD GDKDFYDERA bmy_00611T0/1-709 KDQWNLGPQT LRYAPRELPE TSSAAKASCD YRHKHRKTSD GDQDFYDGRT ENSTTRP00000001886/1-711 KDQWNLGPQT LRYAPREFPE TSSAAKVSCD YRHKHRKTSD GDQDFYDGRT BACU005520/1-711 KDQWNLGPQT LRYAPKELPE TSSAAKASCD YRHKHRKTSD GDQDFYDGRT 301 350 ENSBTAP00000054900/1-708 QKYPKEEDRK LGSQKGPVNR ESSCSHAGRG RETEGGQVKE SSKPSKKDCA bmy_00611T0/1-709 QKYSKEEDRK FGSQKGPVNR ESDCFNAGRG RETEGGQVKE PFKPSKKDCT ENSTTRP00000001886/1-711 QKYSKEEDRK FGSQKGPVNR ESDCFNAGRG RETEGGQVKE PFKPSKKDCT BACU005520/1-711 QKYSKEEDRK FGSQKGPVNR ESDCFNAGRG RETEGGQVKE PFKPSKKDCT 351 400 ENSBTAP00000054900/1-708 ALTHSDKSDV DLRSCKDTRK DKIKKERAGS KESSSSSNQL DNSD--SDLK bmy_00611T0/1-709 ACTHSNKSDV GLRPCNDKRK DKIKKEGAGR KESNSSHNRL DKSKKLSDSK ENSTTRP00000001886/1-711 TCTHSDKSDV GLRPCNDKRK DKIKKEGAGR KESNSSHNRL DKSKKLSDSK BACU005520/1-711 ACTHSNKSDV GLRPCNDKRK DKIKKEGAGR KESNSSHNRL DKSKKLSDSK 401 450 ENSBTAP00000054900/1-708 PSSVFLKKKS LTVKVDVQQG QNKSRVASSY STERQMSHDL VAVGRKSEKF bmy_00611T0/1-709 PSSAVLRKKS LTVKVDVKK- --TSRVASSY STERQMSHDL VAVGRKSENF ENSTTRP00000001886/1-711 PSSSVLRKKS LTVKVDVKK- --TSRVASSY STERQMSHDL VAVGRKSENF BACU005520/1-711 PSSAILRKKS LTVKVDVKK- --TSRVASSY STERQMSHDL VAVGRKSENF 451 500 ENSBTAP00000054900/1-708 HPVFEHLDST QNTENKPTGE FAQQIITIIH QVKANYFPPS EITLHERFSK bmy_00611T0/1-709 HPVFEHLDST QNTENKPTGE FAQEIITIIH QVKADYFPSL GITLHERFSK ENSTTRP00000001886/1-711 HPVFEHLDST QNTENKPTGE FAQEIITIIH QVKADYFPSL GITLHERFSK BACU005520/1-711 HPVFEHLDST QNTENKPTGE FAQEIITIIH QVKADYFPSL GITLHERFSK 501 550 ENSBTAP00000054900/1-708 IQVKKAADAN ETKLSSDPEI HRRIDMSLAE LQSKQTMVYD SKQTLVKIID bmy_00611T0/1-709 MQVTQAADVN EFKLNSDPEI HRRIDMSLAE LQSKQTMVYD SEQTLVKIID ENSTTRP00000001886/1-711 MQVTQAADVN EFKLNSDPEI HRRIDMSLAE LQSKQTMVYD SEQTLVKIID BACU005520/1-711 MQVTQAADVN EFKLNSDPEI HRRIDMSLAE LQSKQTMVYD SEQTLVKIID 551 600 ENSBTAP00000054900/1-708 PSDLRHDIER RRKERLQNED EHIFHIASAA ERSDQHSSFS RSKDTHVDEF bmy_00611T0/1-709 PNDLRHDIER RRKERLQNED EHIFHIASAA ERSDQHSSFS RLKNTHVDGF ENSTTRP00000001886/1-711 PNDLRHDIER RRKERLQNED EHIFHIASAA ERSDQHSSFT RLKNTHVDGF BACU005520/1-711 PNDLRHDIER RRKERLQNED EHIFHIASAA ERSDQHSSFS RLKNTHVDVF 601 650 ENSBTAP00000054900/1-708 QKPTSFEKSN FRKFIQKPC- SSDTMQRKDV ITHRPF-VEE NNQNTRGFRR bmy_00611T0/1-709 QKPTCLVKSN FRKFIQKPYL NYHTMQRKDV ITHKPFGIEG NHQNTRGFRR ENSTTRP00000001886/1-711 QKSTCLVKSN FRKFIQKPYL NYHTMQRKDV ITHKPFGIEG NHQNTRGFRR BACU005520/1-711 QKPTCLVKSN FRKFIQKPYL NYHTMQRKDV ITHKPFGIEG NHQNTRGFRR 651 700 ENSBTAP00000054900/1-708 PFKTNFRGGR FHFQHKSDLV QKSLYIQAKY QRLRFAGPRG FVTNKFRERL bmy_00611T0/1-709 TFKTNLRGGT FQPQYKSGLV QKSLCIQAKY QRLRFAGPSG FITNKFRERL ENSTTRP00000001886/1-711 TFKTNFRGGT FQPQYKSGLL QKSLCIQAKY QRLRFAGPSG FITNKFRERL BACU005520/1-711 TFKTNLRGGT FQPQYKSGLV QKSLCIQAKY QRLRFAGPSG FITNKFRERL 701 750 ENSBTAP00000054900/1-708 LRGKK--VSW IIII bmy_00611T0/1-709 LRKKKEYTNI APAI ENSTTRP00000001886/1-711 LRKKKEYTNI APAI BACU005520/1-711 LRKKKEYTNI APAI