KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 18:25:15 2014 Check: 00 .. Name: ENSTTRP00000013177/1-523 Len: 540 Check: 6402 Weight: 1.00 Name: ENSP00000314067/1-524 Len: 540 Check: 8090 Weight: 1.00 Name: BACU004477/1-491 Len: 540 Check: 7345 Weight: 1.00 Name: bmy_02304T0/1-450 Len: 540 Check: 6344 Weight: 1.00 Name: ENSBTAP00000054939/1-524 Len: 540 Check: 9974 Weight: 1.00 // 1 50 ENSTTRP00000013177/1-523 MSDNGELEDK PPAPPVRMSS TIFSTGGKDP LSANHSLKPL PSVPEEKKPR ENSP00000314067/1-524 MSDNGELEDK PPAPPVRMSS TIFSTGGKDP LSANHSLKPL PSVPEEKKPR BACU004477/1-491 MYDNGELEDK PPAPPVRMSS TIFSTGGKDP LSANHSLKPL PSVPEEKKPR bmy_02304T0/1-450 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000054939/1-524 MSDNGELEDK PPAPPVRMSS TIFSTGGKDP LSANHSLKPL PSVPEEKKPR 51 100 ENSTTRP00000013177/1-523 NKIISIFSST EKGSKKKEKE RPEISPPSDF EHTIHVGFDA VTGEFTGMPE ENSP00000314067/1-524 HKIISIFSGT EKGSKKKEKE RPEISPPSDF EHTIHVGFDA VTGEFTGMPE BACU004477/1-491 NKIISIFSST EKGSKKKEKE RPEISPPSDF EHTIHVGFDA VTGEFTGMPE bmy_02304T0/1-450 ---------- --GSKKKEKE RPEISPPSDF EHTIHVGFDA VTGEFTGMPE ENSBTAP00000054939/1-524 NKIISIFSST EKGSKKKEKE RPEISPPSDF EHTIHVGFDA VTGEFTGMPE 101 150 ENSTTRP00000013177/1-523 QWARLLQTSN ITKLEQKKNP QAVLDVLKFY DSNTVKQKYL SFTPPEKDGF ENSP00000314067/1-524 QWARLLQTSN ITKLEQKKNP QAVLDVLKFY DSNTVKQKYL SFTPPEKDGF BACU004477/1-491 QWARLLQTSN ITKLEQKKNP QAVLDVLKFY DSNTVKQKYL SFTRPEKDGF bmy_02304T0/1-450 QWARLLQTSN ITKLEQKKNP QAVLDVLKFY DSNTVKQKYL SFTPPEKDGF ENSBTAP00000054939/1-524 QWARLLQTSN ITKLEQKKNP QAVLDVLKFY DSNTVKQKYL SFTPPEKDGF 151 200 ENSTTRP00000013177/1-523 PSGTPALNTK GSET-AVVTE EDDDDEETPP PVIAPRPDHT KS-------- ENSP00000314067/1-524 PSGTPALNAK GTEAPAVVTE EEDDDEETAP PVIAPRPDHT KS-------- BACU004477/1-491 PSGTPALNTK GSET-ALVTE EDDDDEETPP PVIAPRPDHT KS-------- bmy_02304T0/1-450 PSGTPALNTK GSET-AVVTE EDDDDEETPP PVIAPRPDHT KSCRKVLYLK ENSBTAP00000054939/1-524 PSGTPALNTK GSETSAVVTE EDDDDEEALP PVIAPRPDHT KS-------- 201 250 ENSTTRP00000013177/1-523 --------XX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX ENSP00000314067/1-524 --------IY TRSVIDPVPA PVGDSHVDGA AKSLDKQKKK TKMTDEEIME BACU004477/1-491 --------IY TRSVIDPIPA PVGDSNVDSG AKTSDKQKKK AKMTDEEIME bmy_02304T0/1-450 LGSYLLSKIY TRSVIDPIPA PVGDSNVDSG AKTSDKQKKK AKMTDEEIME ENSBTAP00000054939/1-524 --------IY TRSVIDPIPA PVGDSNVDGG AKTSDKQKKK AKMTDEEIME 251 300 ENSTTRP00000013177/1-523 XLRTIVSIGD PKKKYTRYEK IGQGASGTVF TATDVALGQE VAIKQINLQK ENSP00000314067/1-524 KLRTIVSIGD PKKKYTRYEK IGQGASGTVF TATDVALGQE VAIKQINLQK BACU004477/1-491 KLRTIVSIGD PKKKYTRYEK IGQGASGTVF TATDVALGQE VAIKQINLQK bmy_02304T0/1-450 KLRTIVSIGD PKKKYTRYEK IGQGASGTVF TATDVALGQE VAIKQINLQK ENSBTAP00000054939/1-524 KLRTIVSIGD PKKKYTRYEK IGQGASGTVF TATDVALGQE VAIKQINLQK 301 350 ENSTTRP00000013177/1-523 QPKKELIINE ILVMKELKNP NIVNFLDSYL VGDELFVVME YLAGGSLTDV ENSP00000314067/1-524 QPKKELIINE ILVMKELKNP NIVNFLDSYL VGDELFVVME YLAGGSLTDV BACU004477/1-491 QPKKELIINE ILVMKELKNP NIVNFLDSYL VGDELFVVME YLAGGSLTDV bmy_02304T0/1-450 QPKKELIINE ILVMKELKNP NIVNFLDSYL VGDELFVVME YLAGGSLTDV ENSBTAP00000054939/1-524 QPKKELIINE ILVMKELKNP NIVNFLDSYL VGDELFVVME YLAGGSLTDV 351 400 ENSTTRP00000013177/1-523 VTETCMDEAQ IAAVCRECLQ ALEFLHANQV IHRDIKSDNV LLGMEGSVKL ENSP00000314067/1-524 VTETCMDEAQ IAAVCRECLQ ALEFLHANQV IHRDIKSDNV LLGMEGSVKL BACU004477/1-491 VTETCMDEAQ IAAVCRECLQ ALEFLHANQV IHRDIKSDNV LLGMEGSVKL bmy_02304T0/1-450 VTETCMDEAQ IAAVCRECLQ ALEFLHANQV IHRDIKSDNV LLGMEGSVKL ENSBTAP00000054939/1-524 VTETCMDEAQ IAAVCRECLQ ALEFLHANQV IHRDIKSDNV LLGMEGSVKL 401 450 ENSTTRP00000013177/1-523 TDFGFCAQIT PEQSKRSTMV GTPYWMAPEV VTRKAYGPKV DIWSLGIMAI ENSP00000314067/1-524 TDFGFCAQIT PEQSKRSTMV GTPYWMAPEV VTRKAYGPKV DIWSLGIMAI BACU004477/1-491 TDFGFCAQIT PEQSKRSTMV GTAYWMAPEV VTRKAYGPKV DIWSLGIMAI bmy_02304T0/1-450 TDFGFCAQIT PEQSKRSTMV GTPYWMAPEV VTRKAYGPK- ---------- ENSBTAP00000054939/1-524 TDFGFCAQIT PEQSKRSTMV GTPYWMAPEV VTRKAYGPKV DIWSLGIMAI 451 500 ENSTTRP00000013177/1-523 EMVEGEPPYL NENPLRALYL IATNGTPELQ NPEKLSPIFR DFLNRCLEMD ENSP00000314067/1-524 EMVEGEPPYL NENPLRALYL IATNGTPELQ NPEKLSPIFR DFLNRCLEMD BACU004477/1-491 EMVEGEPPYL SENPLRALYL IPTNGTPELQ NPEKLSPIFW DFLNRCLEMD bmy_02304T0/1-450 ---------- ------ALYL IATNGTPELQ NPEKLSPIFR DFLNRCLEMD ENSBTAP00000054939/1-524 EMVEGEPPYL NENPLRALYL IATNGTPELQ NPEKLSPIFR DFLNRCLEMD 501 550 ENSTTRP00000013177/1-523 VEKRGSAREL LQHPFLKLAK PLSSLTPLIM AAKEAMKSNR ENSP00000314067/1-524 VEKRGSAKEL LQHPFLKLAK PLSSLTPLIM AAKEAMKSNR BACU004477/1-491 VEKRSVCI-- ---------- ---------- ---------- bmy_02304T0/1-450 VEKRGSAREL LQHPFLKLAK PLSSLTPLIM AAKEAMKSNR ENSBTAP00000054939/1-524 VEKRGSAREL LQHPFLKLAK PLSSLTPLIM AAKEAMKSNR