KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 18:25:16 2014 Check: 00 .. Name: ENSBTAP00000054954/1-306 Len: 522 Check: 5797 Weight: 1.00 Name: ENSP00000379217/1-309 Len: 522 Check: 9858 Weight: 1.00 Name: ENSTTRP00000004952/1-522 Len: 522 Check: 5721 Weight: 1.00 Name: bmy_21415T0/1-309 Len: 522 Check: 8669 Weight: 1.00 Name: BACU018199/1-268 Len: 522 Check: 9716 Weight: 1.00 // 1 50 ENSBTAP00000054954/1-306 ---------- ---------- ---------- ---------- ---------- ENSP00000379217/1-309 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000004952/1-522 IRPHYAQSDS TGRDSLNVRG AGKRRWAACS VTSAKVTCGA GGEPHSHRRP bmy_21415T0/1-309 ---------- ---------- ---------- ---------- ---------- BACU018199/1-268 ---------- ---------- ---------- ---------- ---------- 51 100 ENSBTAP00000054954/1-306 ---------- ---------- ---------- ---------- ---------- ENSP00000379217/1-309 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000004952/1-522 GMSAQTGLAP SQGAAQGLRG PPGMQQPLQE HSHVEWNRTR GLLRASLPGT bmy_21415T0/1-309 ---------- ---------- ---------- ---------- ---------- BACU018199/1-268 ---------- ---------- ---------- ---------- ---------- 101 150 ENSBTAP00000054954/1-306 ---------- ---------- ---------- ---------- ---------- ENSP00000379217/1-309 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000004952/1-522 PPSKSASATA GATPPLKGAG PLAQKPTPPC TTAVPLASRG QSPASGRFPG bmy_21415T0/1-309 ---------- ---------- ---------- ---------- ---------- BACU018199/1-268 ---------- ---------- ---------- ---------- ---------- 151 200 ENSBTAP00000054954/1-306 ---------- ---------- ---------- ---------- ---------- ENSP00000379217/1-309 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000004952/1-522 PAPGSKLKRG RGRAGERRRR VSIETSTCFR PGCARLGAVT GANLSQLAFS bmy_21415T0/1-309 ---------- ---------- ---------- ---------- ---------- BACU018199/1-268 ---------- ---------- ---------- ---------- ---------- 201 250 ENSBTAP00000054954/1-306 ---------- ---MAAAGAP DGMEEPGMDT EAE---TEAP ARSLNCVEAE ENSP00000379217/1-309 ---------- ---MAAAGAP DGMEEPGMDT EAETVATEAP ARPVNCLEAE ENSTTRP00000004952/1-522 RRPLRERVII NLRKVGAGAP DGMEEPGMDT EAETVATEGP ARPLSCLEAE bmy_21415T0/1-309 ---------- ---MAAAGAP DGMEETGMDT EAETVATEGP ARPLNCLEAE BACU018199/1-268 ---------- ---------- ---------- ---------- ---------- 251 300 ENSBTAP00000054954/1-306 AAAGAAAEDS CAARGNLQPA PAQPPGDPAA QASVSNGEDA GGGAGRELVD ENSP00000379217/1-309 AAAGAAAEDS GAARGSLQPA PAQPPGDPAA QASVSNGEDA GGGAGRELVD ENSTTRP00000004952/1-522 AAAGAAAEDS CAARGSLQPA PAQPPGDLAA QASVSNGEDA GGGAGRELVD bmy_21415T0/1-309 AAAGAAAEDS CAARGSLQPA PAQPPGDLAA QASVSNGEDA GGGAGRELVD BACU018199/1-268 ----MAAADS CAARGSLQPA PAQPPGDLAA QASVSNGEDA GGGGGRELVD 301 350 ENSBTAP00000054954/1-306 LKIIWNKTKH DVKFPLDSTG SELKQKIHSI TGLPPAMQKV MYKGLVPEDK ENSP00000379217/1-309 LKIIWNKTKH DVKFPLDSTG SELKQKIHSI TGLPPAMQKV MYKGLVPEDK ENSTTRP00000004952/1-522 LKIIWNKTKH DVKFPLDSTG SELKQKIHSI TGLPPAMQKV MYKGLVPEDK bmy_21415T0/1-309 LKIIWNKTKH DVKFPLDSTG SELKQKIHSI TGLPPAMQKV MYKGLVPEDK BACU018199/1-268 LKIIWNKTKH DVKFPLDSTG SELKQKIHSI TGLPPAMQKV MYKGLVPEDK 351 400 ENSBTAP00000054954/1-306 TLREIKVTSG AKIMVVGSTI NDVLAVNTPK DAAQQDAKAE ENKKEPLCRQ ENSP00000379217/1-309 TLREIKVTSG AKIMVVGSTI NDVLAVNTPK DAAQQDAKAE ENKKEPLCRQ ENSTTRP00000004952/1-522 TLREIKVTSG AKIMVVGSTI NDVLAVNTPK DAAQQDAKAE ENKKEPLCRQ bmy_21415T0/1-309 TLREIKVTSG AKIMVVGSTI NDVLAVNTPK DAAQQDAKAE ENKKEPLCRQ BACU018199/1-268 TLREIKVTSG AKIMVVGSTI NDVLAVNTPK DAAQQDAKAE ENKKEPLCRQ 401 450 ENSBTAP00000054954/1-306 KATRKILSPS KPRDIFPSRY GPNQRVSAMP LCGLXNKSGG KVRLTFKLEQ ENSP00000379217/1-309 KQHRKVLDKG KPEDVMPSVK GAQERLPTVP LSGMYNKSGG KVRLTFKLEQ ENSTTRP00000004952/1-522 KQHRKVLDKG KPEDVMPSVK GAQERLPAVP LSGMYNKSGG KVRLTFKLEQ bmy_21415T0/1-309 KQHRKVLDKG KPEDVMPSVK GAQERLPAVP LSGMYNKSGG KVRLTFKLEQ BACU018199/1-268 KQHRKVLDKG KPEDVMPSVK GAQERLPAVP LSGMYNKSGG KVRLTFKLEQ 451 500 ENSBTAP00000054954/1-306 DQLWIGTQER TEKLPMGSIK NVVSEPIEGH EDYHMMAFQL GPTEASYYWV ENSP00000379217/1-309 DQLWIGTKER TEKLPMGSIK NVVSEPIEGH EDYHMMAFQL GPTEASYYWV ENSTTRP00000004952/1-522 DQLWIGTKER TEKLPMGSIK NVVSEPIEGH EDYHMMAFQL GPTEASYYWV bmy_21415T0/1-309 DQLWIGTKER TEKLPMGSIK NVVSEPIEGH EDYHMMAFQL GPTEASYYWV BACU018199/1-268 DQLWIGTKER TEKLPMGSIK NVVSEPIEGH EDYHMMAFQL GPTEASYYWV 501 550 ENSBTAP00000054954/1-306 YWVPTQYVDA IKDTVLGKWQ YF ENSP00000379217/1-309 YWVPTQYVDA IKDTVLGKWQ YF ENSTTRP00000004952/1-522 YWVPTQYVDA IKDTVLGKWQ YF bmy_21415T0/1-309 YWVPTQYVDA IKDTVLGKWQ YF BACU018199/1-268 YWVPTQYVDA IKDTVLGKWQ YF