KEY:
    ENSP* - Homo sapiens (Human)
    ENSBTA* - Bos taurus (Cow)
    ENSTTR* - Tursiops truncatus (Dolphin)
    bmy_* - Balaena mysticetus (Bowhead whale)
    BACU* - Balaenoptera acutorostrata (Minke whale)

Copy from below the line for a valid .msf file.

----------------------------------------------------------------------------------
                
NoName   MSF: 4  Type: P  Thu May 15 18:25:17 2014  Check: 00 ..

 Name: ENSBTAP00000054983/1-218  Len:    262  Check:  2359  Weight:  1.00
 Name: ENSP00000353785/1-219     Len:    262  Check:  9152  Weight:  1.00
 Name: bmy_05106T0/1-262         Len:    262  Check:  4119  Weight:  1.00
 Name: BACU018371/1-174          Len:    262  Check:  7761  Weight:  1.00

//


                          1                                                   50
ENSBTAP00000054983/1-218  ---------- ---------- ---------- ---------- -MADSRPKP- 
ENSP00000353785/1-219     ---------- ---------- ---------- ---------- --MADKAKPA 
bmy_05106T0/1-262         MDTLSRGRTV AGGPQPLSAG SGGLGQLPAE AGDLLLLPPS SMADSRPKPP 
BACU018371/1-174          ---------- ---------- ---------- ---------- ---------- 


                          51                                                 100
ENSBTAP00000054983/1-218  --ANKTPPKS PGEPAKDKAA KRLSLEAEGA GEGAAAAGAE LSALEEAFRK 
ENSP00000353785/1-219     KAANRTPPKS PGDPSKDRAA KRLSLESEGA GEGA-AASPE LSALEEAFRR 
bmy_05106T0/1-262         KPANKTPPKS PGDPAKDKAA KRLSLESEGA SEGAAAAGPE LSALEEAFRR 
BACU018371/1-174          ---------- ---------- ---------- -----AAGPE LSALEEAFRR 


                          101                                                150
ENSBTAP00000054983/1-218  FAVHGDARAS GREMHGKNWS KLCRDCQVID GRSVTVTDVD IVFSKIKGKS 
ENSP00000353785/1-219     FAVHGDARAT GREMHGKNWS KLCKDCQVID GRNVTVTDVD IVFSKIKGKS 
bmy_05106T0/1-262         FAVHGDTRAT GKEMHGKNWS KLCRDCQVID GRNVTVTDVD IVFSKIKGKS 
BACU018371/1-174          FAVHGDTRAT GKEMHGKNWS KLCRDCQVID GRNVTVTDVD IVFSKIKGKS 


                          151                                                200
ENSBTAP00000054983/1-218  CRTITFEQFK EALEELAKKR FKDKSAEEAV REVHKLIEGK APIISGVTKA 
ENSP00000353785/1-219     CRTITFEQFQ EALEELAKKR FKDKSSEEAV REVHRLIEGK APIISGVTKA 
bmy_05106T0/1-262         CRTISFEQFK EALEELAKKR FKDKSGEAAV REVHRLVEGK APIISGVTKA 
BACU018371/1-174          CRTISFEQFK EALEELAKKR FKDKSGEAAV REVHRLVEGK APIISGVTKA 


                          201                                                250
ENSBTAP00000054983/1-218  ISSPTVSRLT DTSKFTGSHK ERFDPSGRGK GRAGRVDLVD ESGYVPGYKH 
ENSP00000353785/1-219     ISSPTVSRLT DTTKFTGSHK ERFDPSGKGK GKAGRVDLVD ESGYVSGYKH 
bmy_05106T0/1-262         ISSPTVSRLT DTTKFTGSHK ERFDPSGRGK GRAGRVDLVD ESGYVPGYKH 
BACU018371/1-174          ISSPTVSRLT DTTKFTGSHK ERFDPSGRGK GRAGRVDLVD ESGYVPGYKH 


                          251                                                300
ENSBTAP00000054983/1-218  AGTYDQKVQG GK 
ENSP00000353785/1-219     AGTYDQKVQG GK 
bmy_05106T0/1-262         AGTYDQKVQG GK 
BACU018371/1-174          AGTYDQKVQ- --