KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 18:25:20 2014 Check: 00 .. Name: ENSP00000463375/1-621 Len: 627 Check: 734 Weight: 1.00 Name: ENSBTAP00000054997/1-557 Len: 627 Check: 6093 Weight: 1.00 Name: ENSTTRP00000008026/1-100 Len: 627 Check: 1870 Weight: 1.00 Name: BACU017040/1-305 Len: 627 Check: 7978 Weight: 1.00 Name: bmy_01644T0/1-406 Len: 627 Check: 9003 Weight: 1.00 // 1 50 ENSP00000463375/1-621 MIATGGLLRI SARKQDPLRP PSQIPKRKRK AKKRRKNDVV VVKGKLKLCS ENSBTAP00000054997/1-557 MIATGGLLRI SARKQDPLRP PGQVPKRKRK TKKRRKNDVV VVKGKLKLCS ENSTTRP00000008026/1-100 MIATGGLLRI SARKQDPLRP PSQVPKRRRK AKKRRKNDVV VVKGKLKLCS BACU017040/1-305 MIATGGLLRI SARKQDPLRP PSQVPKRKRK ARKRRKNDVV VVKGKLKLCS bmy_01644T0/1-406 MIATGGLLRI SARKQDPLHP PSQVPKRKRK ARKRRKNDVV VVKGKLKLCS 51 100 ENSP00000463375/1-621 ISGLIALCGI LVLLVGIAMA VVGYWPKATG TNREGGKQ-- LPPAGSSHRV ENSBTAP00000054997/1-557 VSGLIALCGI VVLLVGIALA VVGYWPKANG AHREGAKQPP PPPGDSGPRV ENSTTRP00000008026/1-100 VSGLIALCGI LVLLVGIALA VVGYWPKANG TNREG----- ---------- BACU017040/1-305 VSGLIALCGI LVLLVGIALA VVGYWPKANG TNREGGKQ-- LPPAGSGHRV bmy_01644T0/1-406 VSGLIALCGI LVLLVGIALA VVGYWPKANG TNREGGKQ-- LPPAGSGHRV 101 150 ENSP00000463375/1-621 PTTANSSSSG SKNRSRSHPR APGGVNSSSA GAPRSTPPAR AASPSSSS-T ENSBTAP00000054997/1-557 PSVT-SSSGG NRNRSRTQPG PX-------- ---------- ---------- ENSTTRP00000008026/1-100 ---------- ---------- ---------- --------AR SSAPSSSSPT BACU017040/1-305 PTMTNSSSSG SRNRSRKHPG PPEGVTASSV GAPRSTPPAR SPAPSSSSST bmy_01644T0/1-406 PTMTNSSSSG SRNRSRKHPG PPAGVTASSV GAPRSTPPAR SPAPSSSSST 151 200 ENSP00000463375/1-621 SVGFFFRIFS GYLHSDKLKV FGPLIMGIGI FLFICANAVL HENRDKKTKI ENSBTAP00000054997/1-557 -------VFS GYLHSDKLKV FGPLIMGIGI FLFICANAVL HENRDKETKI ENSTTRP00000008026/1-100 SVG------- ---------- ---------- ---------- ---------- BACU017040/1-305 SVGFFFRIFS GYLHSDKLKV FGPLIMGIGI FLFICANAVL HENRDKKTKI bmy_01644T0/1-406 SVGFFFRIFS GYLHSDKLKV FGPLIMGIGI FLFICANAVL HENRDKKTKI 201 250 ENSP00000463375/1-621 INLRDLYSTV IDVHSLRAKD LAAAAAAAAA AAASSSSSAP AAAPPGAIPL ENSBTAP00000054997/1-557 INLRDLYSTV IDVHSLRAKD LAAAA----- -----SSSGP ASAPPGAAPL ENSTTRP00000008026/1-100 ---------- ---------- ---------- ---------- ---------- BACU017040/1-305 INLRDLYSTV IDVHSLRAKD LAAAAAAAAA AAAS------ ---------- bmy_01644T0/1-406 INLRDLYSTV IDVHSLRAKD LAAAAATAAA AAAASSSSAP ASAPPGAAPL 251 300 ENSP00000463375/1-621 NGFLSYVQSR GLELKPGGCG GSG-DAFGAA AMLAKGSWP- PHPAAPSGGR ENSBTAP00000054997/1-557 NGFLGYVQSR GLELKPGTRG GAARDAFGAA AMLARGAWPH PAARSGGGGG ENSTTRP00000008026/1-100 ---------- ---------- ---------- ---------- ---------- BACU017040/1-305 ---------- ---------- ---------- ---------- ---------- bmy_01644T0/1-406 NGFLSYVH-- ---------- ---------- ---------- ---------- 301 350 ENSP00000463375/1-621 PRGAASPPDL ASSPRCPREP PSLAEAVYSV YRERSGVAGS RRAAAATAAA ENSBTAP00000054997/1-557 TPGAASPPDL VSSPRRPREP PSLAEAVYSI YRERPGVAGR RR-------- ENSTTRP00000008026/1-100 ---------- ---------- ---------- ---------- ---------- BACU017040/1-305 ---------- ---------- ---------- ---------- ---------- bmy_01644T0/1-406 ---------- ---------- ---------- ---------- ---------- 351 400 ENSP00000463375/1-621 AASSCSSPAP CSPPESWGRQ STASSFVDSS LSAFALLPLQ GGRDRGGDAE ENSBTAP00000054997/1-557 AASSGSSPVP GSPPETWGRP STASSLVGSS LSAFALLPLP G--DRDGDAG ENSTTRP00000008026/1-100 ---------- ---------- ---------- ---------- ---------- BACU017040/1-305 ---------- ---------- ---------- ---------- ---------- bmy_01644T0/1-406 ---------- ---------- ---------- ---------- ---------- 401 450 ENSP00000463375/1-621 GASCSWQRPP GERGSQEIPR GELDLSMTNL RGAEGSMRGA RREPEEPEGA ENSBTAP00000054997/1-557 AASRGWQRPP GERGAREIP- --LDLSLADL RG--GARGGA RWAPREPEEP ENSTTRP00000008026/1-100 ---------- ---------- ---------- ---------- ---------- BACU017040/1-305 ---------- ---------- ---------- ---------- ---------- bmy_01644T0/1-406 ---------- ---------- ---------- ---------- ---------- 451 500 ENSP00000463375/1-621 VAARAARGQG GRLPRTGRYA ALRRRSTSGL PDYRAPPSPE PPPSPGSADP ENSBTAP00000054997/1-557 AAARTARGQG GRLPRTGRHA ALRRRSTSGL PDYRAASYPE PPSASRSADL ENSTTRP00000008026/1-100 ---------- ---------- ---------- ---------- ---------- BACU017040/1-305 ---------- ---------- ---------- ---------- ------SADL bmy_01644T0/1-406 ---------- ---------- ------TSGL PDYRAPSSPE PSPASRSADL 501 550 ENSP00000463375/1-621 DSSPLAKAAS PSPPLRLEGS PPTRRDSGSS QSDDPSSSNK GYTPLREAGT ENSBTAP00000054997/1-557 DSSLPELAAS PE-------- SPARPDSPSS HSDDPSCSNK GYTPLRETGT ENSTTRP00000008026/1-100 ---------- ---------- ---------- ---------- ---------- BACU017040/1-305 DSSVLAPAAS PEPPLRRERS PPAGPDSPSS QSDDPSCSNK GYTPLREAGT bmy_01644T0/1-406 DSSVPAPAAS PEPPLRRERS PPAGPDSPSS QSDDPSCSNK GYTPLREAGT 551 600 ENSP00000463375/1-621 STESVLDAVA GQTRDSAVAA PVLGAEQSSP EGASQEPPTA EQPQPVQRQF ENSBTAP00000054997/1-557 SLESMGDLRE GGNPDGE-AA IAPGPEQRPP EDPGQEVPEA EPSQPVQRQF ENSTTRP00000008026/1-100 ---------- ---------- ---------- ---------- ---------- BACU017040/1-305 SLESVVDPVA GESPDAA-CE ---------- ---------- ---------- bmy_01644T0/1-406 SLESVVDPVA GESPDGE-AA TSPGAEQSPP EGPGQEPIAG EPPQRVQRQF 601 650 ENSP00000463375/1-621 TNKEKLIMIS RSHAIGVEE- ELESTGI ENSBTAP00000054997/1-557 TNKEKLYMIS RSHASGVEDG ELESAGI ENSTTRP00000008026/1-100 ---------- ---------- ------- BACU017040/1-305 ---------- ---------- ------- bmy_01644T0/1-406 TNEEKLFMIS RSHAPGVEDG ELETTVI