KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 4 Type: P Thu May 15 18:25:23 2014 Check: 00 .. Name: ENSP00000337512/1-770 Len: 770 Check: 3833 Weight: 1.00 Name: ENSBTAP00000055048/1-764 Len: 770 Check: 1865 Weight: 1.00 Name: bmy_18925T0/1-766 Len: 770 Check: 9990 Weight: 1.00 Name: ENSTTRP00000005548/1-763 Len: 770 Check: 5202 Weight: 1.00 // 1 50 ENSP00000337512/1-770 MSKCRKTPVQ QLASPASFSP DILADIFELF AKNFSYGKPL NNEWQLPDPS ENSBTAP00000055048/1-764 MNKCRKQPLG --SSPETFSP DVLADIFELF AKNFSYGKPL NNEWQLPDPS bmy_18925T0/1-766 MSKWRKLPLG --SSPETFSP DVLADIFELF AKNFSYGKPL NNEWQLPDSS ENSTTRP00000005548/1-763 MSKCRKLPLG --SSPETFSP DVLADIFELF AKNFSYGKPL NDEWQLPDSS 51 100 ENSP00000337512/1-770 EIFTCDHTEL NAFLDLKNSL NEVKNLLSDK KLDEWHEHTA FTNKAGKIIS ENSBTAP00000055048/1-764 EIFTCDHTEF SAFLDLKNSL NEVKNLLSDK KLDEWHEHTA FTNKAGKIIS bmy_18925T0/1-766 EIFTCDHTEF SVFLDLKNSL NEVKNLLSDK KLDEWHEHTA FTNKAGKIIS ENSTTRP00000005548/1-763 EIFTCDHTEF NVFLDLKSSL NEVKNLLSDK KLDEWHEHTA FTNKAGKIIS 101 150 ENSP00000337512/1-770 HVRKSVNAEL CTQAWCKFHE ILCSFPLIPQ EAFQNGKLNS LHLCEAPGAF ENSBTAP00000055048/1-764 HVRKSVNAEL CTQAWCKFHE ILCSFPLIPQ EAFQNGKLNS LHLCEAPGAF bmy_18925T0/1-766 HVRKSVNAEL CTQAWCKFRE ILCSFPLIPQ EAFQNGKLNS LHLCEAPGAF ENSTTRP00000005548/1-763 HVRKSVNAEL CTQAWCKFHE ILCSFPLIPQ EAFQKGKLNS LHLCEAPGAF 151 200 ENSP00000337512/1-770 IASLNHYLKS HRFPCHWSWV ANTLNPYHEA NDDLMMIMDD RLIANTLHWW ENSBTAP00000055048/1-764 IASLNHYLKS HRFPCDWNWV ANTLNPYHEA NDNLTMIMDD RLIANTLHCW bmy_18925T0/1-766 IASLNHYLKS HRFPCDWSWV ANTLNPYHEA NDNLTMIMDD RLIANTLHCW ENSTTRP00000005548/1-763 IASLNHYLKS HRFPCDWSWV ANTLNPYHEA NDNLMMIMDD RLIANTLRCW 201 250 ENSP00000337512/1-770 YFGPDNTGDI MTLKFLTGLQ NFISSMATVH LVTADGSFDC QGNPGEQEAL ENSBTAP00000055048/1-764 YFGPDNTGDI MTLKYLTGLQ NFINSMGTIH LITADGSFDC QGNPGEQEAL bmy_18925T0/1-766 YFGPDNTGDI MTLKYLTGLQ NFISSMATVH LITADGSFDC QGNPGEQEAL ENSTTRP00000005548/1-763 YFGPDNTGDI MTLKYLTGLQ NFISSMDTIH LITADGSFDC QGNPGEQEAL 251 300 ENSP00000337512/1-770 VSSLHYCEVV TALTTLGNGG SFVLKMFTMF EHCSINLMYL LNCCFDQVHV ENSBTAP00000055048/1-764 VSCLHYCEAV TALMTLGNGG SFVLKMFTLF EHCSINLMYL LNCSFDQVHI bmy_18925T0/1-766 VSSLHYCEAV TALMTLGNGG SFVLKMFTLF EHCSINLMYL LNCSFDKVHV ENSTTRP00000005548/1-763 VSSLHYCEAV TALMTLGSGG SFVLKMFTLF EHCSINLMYL LNCSFDKVHV 301 350 ENSP00000337512/1-770 FKPATSKAGN SEVYVVCLHY KGREAIHPLL SKMTLNFGTE MKRKALFPHH ENSBTAP00000055048/1-764 FKPATSKAGN SEVYVVCLYY KGRETIYPIL SKMVLNFGSE MTKKALFPHH bmy_18925T0/1-766 FKPATSKAGN SEVYVVCLYY KGREAIYPLL SKMVLNFGPE MTRKALFPHH ENSTTRP00000005548/1-763 FKPATSKAGN SEVYVVCLYY KGREAIYPLL SKMVLNFGPE MTRKALFPHH 351 400 ENSP00000337512/1-770 VIPDSFLKRH EECCVFFHKY QLETISENIR LFECMGKAEQ EKLNNLRDCA ENSBTAP00000055048/1-764 MIPESFLRKH EECCTFFHKY QLETISENIR LFECMGKREQ AKLNSLRDYA bmy_18925T0/1-766 MIPESFLKRH EECCVFFHKY QLETISENIR LFECMGKGEQ AKLNSLRDYA ENSTTRP00000005548/1-763 MIPESFLKRH EECCVFFHKY QLETISENIR LFECMGEGEK AKLNSLRDYA 401 450 ENSP00000337512/1-770 IQYFMQKFQL KHLSRNNWLV KKSSIGCSTN TKWFGQRNKY FKTYNERKML ENSBTAP00000055048/1-764 VQYFMQKFQL KPLSRNNWLV KKSNIGCSTN TKWFGQRSRY FKTYNERKML bmy_18925T0/1-766 VQYFMQKFQL KPLSRNNWLV KKSNIGCSTN TKWFGQRNRY FKTYNERKML ENSTTRP00000005548/1-763 VQYFMQKFQL KPLSRNNWLV KKSNIGCSTN TKWFGQRNRY FKTYNERKML 451 500 ENSP00000337512/1-770 EALSWKDKVA KGYFNSWAEE HGVYHPGQSS ILEGTASNLE CHLWHILEGK ENSBTAP00000055048/1-764 ETLSWKDKVA KGYFNSWAEE HATYHPGQSS LLEGTAFNLE CHLWQVLQGK bmy_18925T0/1-766 ETLSWKDKVA KGYFNSWAEE HAAYHPGQSS LLEGTASNLE CHLWQILQGK ENSTTRP00000005548/1-763 ETLSWKDKVA KGYFNSWAEE HAAYHPGQSA LLEGTASNLE CHLWQILQGK 501 550 ENSP00000337512/1-770 KLPKVKCSPF CNGEILKTLN EAIEKSLGGA FNLDSKFRPK QQYSCSCHVF ENSBTAP00000055048/1-764 KLPKVKCSPF CDGEILKALN ESVEKSLGGA LNFDLKFRPK QKHCCSCHVF bmy_18925T0/1-766 KLPRVNCSPF CDGEILKALN EAIEKSLGGA LNLDSKFRPK QQYCCSCHVF ENSTTRP00000005548/1-763 KLPRVNCSPF CDGEILXXXX XXXXXXXXXX XXXXXXFRKQ Q---CVCHIF 551 600 ENSP00000337512/1-770 SEELIFSELC SLTECLQDEQ VVVPSNQIKC LLVGFSTLRN IKMHIPLEVR ENSBTAP00000055048/1-764 SEELIFSELF SLTKCLQDHQ DKEPSTQIKC LLVGFPALHN IKMPIPLEVR bmy_18925T0/1-766 SEELVFSELF SLTKCLQDEQ DVEPSNQVKC LLVGFPALQH VKIHIPLEVQ ENSTTRP00000005548/1-763 SEELVFSEVF SVTK-LQDEQ DVEPSNQVKC VLVGFPALQH VKIHIPLEVQ 601 650 ENSP00000337512/1-770 LLESAELTTF SCSLLHDGDP TYQRLFLDCL LHSLRELHTG DVMILPVLSC ENSBTAP00000055048/1-764 LLESAALMTF SCSLLHDGDP TYQQLFLDCV LHSLQQLHTG DVMILPILSC bmy_18925T0/1-766 LLESAELMTF SCSLLHDGDP TYQQLFLDCL LHSLQQLHTG DTMILPVLSC ENSTTRP00000005548/1-763 LLESAELMTF SCSLLHDGDP AYQQLFLDCL LHSLQQLHTG DIMILPVLSC 651 700 ENSP00000337512/1-770 FTRFMAGLIF VLHSCFRFIT FVCPTSSDPL RTCAVLLCVG YQDLPNPVFR ENSBTAP00000055048/1-764 FTRFMAGLIF VLHSCFRFIT FSCPISSEPL KTCAVLLCVG YQDLPNPVFQ bmy_18925T0/1-766 FTRFMAGLIF VLHSCFRFIT FSCPTSSEPL KTCAVLLCVG YQDLPNPVFQ ENSTTRP00000005548/1-763 FTRFMAGLIF VLHSCFRFIT FSCPTSSEPL KTCAVLLCVG YQDLPNPVFQ 701 750 ENSP00000337512/1-770 YLQSVNELLS TLLNSDSPQQ VLQFVPMEVL LKGALLDFLW DLNAAIAKRH ENSBTAP00000055048/1-764 YLQNVNELLR DLVNTEAPQQ VLQFVPMEVL LKGALLDFLW DLNAAIAKRY bmy_18925T0/1-766 YLQNVNELLS ALVNSDAPQQ VLQFVPMEVL LKGTLLDFLW DLNATIAKRH ENSTTRP00000005548/1-763 YLQNVNELLS ALVNSDAPQQ VLQFVPMEVL LKGTLLDFLW DLNATIAKRH 751 800 ENSP00000337512/1-770 LHFIIQRERE EIINSLQLQN ENSBTAP00000055048/1-764 LHLIIQGERE EIIGSL---- bmy_18925T0/1-766 LHLIIQGERE EIISSLQL-- ENSTTRP00000005548/1-763 LHLIIQGERE EIISSLQLS-