KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 4 Type: P Thu May 15 18:25:27 2014 Check: 00 .. Name: bmy_13077T0/1-258 Len: 338 Check: 3735 Weight: 1.00 Name: BACU004507/1-239 Len: 338 Check: 3280 Weight: 1.00 Name: ENSP00000341581/1-335 Len: 338 Check: 145 Weight: 1.00 Name: ENSBTAP00000055078/1-318 Len: 338 Check: 1143 Weight: 1.00 // 1 50 bmy_13077T0/1-258 MVVGPVRFLQ KIMAVLSANN TAAVNNSDTC LVGCFLIGIP GLEHVHIWLS BACU004507/1-239 ---------- --MAVLSANN TAAVNNADTC LVGCFLIGIP GLEHLHIWLS ENSP00000341581/1-335 --MAQVRALH KIMALFSANS IGAMNNSDTR IAGCFLTGIP GLEQLHIWLS ENSBTAP00000055078/1-318 ---------- -------ANN TAAVNNSDTR LAGCFLLGIP GLEDLHIWLS 51 100 bmy_13077T0/1-258 ILFHTMYVDA LAGNGILICV ILSQPSLQEP MYIFLSMLVS ADILLSTSTM BACU004507/1-239 ILFHTMFVDA LAGSGILICV ILSQPSLQEP MYIFLSMLVS ADILLSTSTM ENSP00000341581/1-335 IPFCIMYITA LEGNGILICV ILSQAILHEP MYIFLSMLAS ADVLLSTTTM ENSBTAP00000055078/1-318 IPFCTMYVAA LAGNSILICV ILSQPSLHEP MYIFLSMLAS TDVLLSTSTM 101 150 bmy_13077T0/1-258 PKALANFWLG -SHISFDGCL TQMFFIHFLF VADSAVLLAM AFDRYMAISS BACU004507/1-239 PKALANFRLG -SQISFDGCL TQMFFIHFLF VADSAVLLAM AFDRDMAISA ENSP00000341581/1-335 PKALANLWLG YSLISFDGCL TQMFFIHFLF I-HSAVLLAM AFDRYVAICS ENSBTAP00000055078/1-318 PKALANFWLS SNHISFDGCL TQMFFIHFLF VAESAVLLAM AFDRYVAICS 151 200 bmy_13077T0/1-258 PLRYATIFTS TVIGKIVAAT LAHNFIIMFP PIFLLKRLHY CRSTSLHIHF BACU004507/1-239 PLRYATIFTS TVIGKIVAAT LAHSFIIMFP PIFLLKRLHY CWINIITHTF ENSP00000341581/1-335 PLRYVTILTS KVIGKIVTAA LSHSFIIMFP SIFLLEHLHY CQINIIAHTF ENSBTAP00000055078/1-318 PLRYATILTS TTIGKIVAAT LARSFIIMFP SIFLLKRLHY CRVNIIAHTF 201 250 bmy_13077T0/1-258 VS-------T CASPVCPILR SPS----TSG MGWQL----- LYSLQTWTSS BACU004507/1-239 CEHMGIARMS YSEISISVWF GLAAALLSTD LDIILITVSC IYILQAVFHL ENSP00000341581/1-335 CEHMGIAHLS CSDISINVWY GLAAALLSTG LDIMLITVSY IHILQAVFRL ENSBTAP00000055078/1-318 CEHMGIARLS CSDISINVWY GLAAALLSTG LDIILIAVSY IDILRAVFHL 251 300 bmy_13077T0/1-258 LSL------- ---------- ---------- ---------- FPAFTSSELS BACU004507/1-239 LS-------- ---------- ---------- ---------- ---------- ENSP00000341581/1-335 LSQDARSKAL STCGSHICVI LLFYVPALFS VFAYRFGGRS VPCYVHILLA ENSBTAP00000055078/1-318 SSQDAQSKAL STCGSHICVI LLFYIPALFS IFAYKFWGRH IPRYVHILLA 301 350 bmy_13077T0/1-258 STSFLEIPGP KP-------- ---------- -------- BACU004507/1-239 ---------- ---------- ---------- -------- ENSP00000341581/1-335 SLYVVIPPML NPVIYGVRTK PILEGAKQMF SNLAKGSK ENSBTAP00000055078/1-318 NLYVVIPPML NPIIYGVRTK QILEGAKQLF SYLIK---