KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 18:25:27 2014 Check: 00 .. Name: ENSTTRP00000013641/1-312 Len: 450 Check: 5244 Weight: 1.00 Name: ENSP00000361918/1-314 Len: 450 Check: 8971 Weight: 1.00 Name: BACU000408/1-434 Len: 450 Check: 8317 Weight: 1.00 Name: bmy_02091T0/1-292 Len: 450 Check: 3743 Weight: 1.00 Name: ENSBTAP00000055082/1-301 Len: 450 Check: 4632 Weight: 1.00 // 1 50 ENSTTRP00000013641/1-312 ---------- ---------- ---------- ---------- ---------- ENSP00000361918/1-314 ---------- ---------- ---------- ---------- ---------- BACU000408/1-434 MLAAAPPQEQ KQMLGEHLFP LIQTMHSNLA GKITGMLLEI DNSELLHMLE bmy_02091T0/1-292 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000055082/1-301 ---------- ---------- ---------- ---------- ---------- 51 100 ENSTTRP00000013641/1-312 ---------- ---------- ---MATTKRV LYV------- ---------- ENSP00000361918/1-314 ---------- ---------- ---MATTKRV LYV------- ---------- BACU000408/1-434 SPESLRSKVD EAVAVLQAHH AKKEAAQKHS LMSALVGTDT GDMGLGAGRS bmy_02091T0/1-292 ---------- ---------- ---MATTKRV LYV------- ---------- ENSBTAP00000055082/1-301 ---------- ---------- ---MATTKRV LYV------- ---------- 101 150 ENSTTRP00000013641/1-312 ------GGLA EEVDDKVLHA AFIPFGDITD IQIPLDYETE KHRGFAFVEF ENSP00000361918/1-314 ------GGLA EEVDDKVLHA AFIPFGDITD IQIPLDYETE KHRGFAFVEF BACU000408/1-434 DSSVWRGGLA EEVDDKVLHA AFIPFGDITD IQIPLDYETE KHRGFAFVEF bmy_02091T0/1-292 ------GGLA EEVDDKVLHA AFIPFGDITD IQIPLDYETE KHRGFAFVEF ENSBTAP00000055082/1-301 ------GGLA EEVDDKVLHA AFIPFGDITD IQIPLDYETE KHRGFAFVEF 151 200 ENSTTRP00000013641/1-312 ELAEDAAAAI DNMNESELFG RTIRVNLAKP MRIKEGSSRP ---------- ENSP00000361918/1-314 ELAEDAAAAI DNMNESELFG RTIRVNLAKP MRIKEGSSRP ---------- BACU000408/1-434 ELAEDAAAAI DNMNESELFG RTIRVNLAKP MRIKEGSSRP GEWEQYRFPI bmy_02091T0/1-292 ELAE------ ---NESELFG RTIRVNLAKP MRIKEGSSRP ---------- ENSBTAP00000055082/1-301 ELAEDAAAAI DNMNESELFG RTIRVNLAKP MRIKEGSSRP ---------- 201 250 ENSTTRP00000013641/1-312 ---------- ---------- -------VWS DDDWLKKFSG KTLEENKEEE ENSP00000361918/1-314 ---------- ---------- -------VWS DDDWLKKFSG KTLEENKEEE BACU000408/1-434 TSSSLALVAF LSRFACKWEL NATLVDRIWS DDDWLKKFSG KTLEENKEEE bmy_02091T0/1-292 ---------- ---------- -------VWS DDDWLKKFSG KTLEENKEEE ENSBTAP00000055082/1-301 ---------- ---------- -------VWS DDDWLKKFSG KTLEENKEEE 251 300 ENSTTRP00000013641/1-312 GSEPPKVEAQ EGEPAVKKAR SNPQVYMDIK IGNKPAGRIQ MLLRSDIVPM ENSP00000361918/1-314 GSEPPKAETQ EGEPIAKKAR SNPQVYMDIK IGNKPAGRIQ MLLRSDVVPM BACU000408/1-434 GSEPPKVETQ EGEPAVKKAW SNPQVYMDIK IGNKPAGRIQ MLLRSDIVPM bmy_02091T0/1-292 GSEPPKVETQ EGEPAVKKAR SNPQVYMDIK IGNKPAGRIQ MLLRSDIVPM ENSBTAP00000055082/1-301 GSEPPKVETQ EGEPTVKKAR SNPQVYMDIK IGNKPAGRIQ MLLRSDVVPM 301 350 ENSTTRP00000013641/1-312 TAENFRCLCT HEKGFGFKGS SFHRIIPQFM CQGGDFTNHN GTGGKSIYGK ENSP00000361918/1-314 TAENFRCLCT HEKGFGFKGS SFHRIIPQFM CQGGDFTNHN GTGGKSIYGK BACU000408/1-434 TAENFRCLCT HEKGFGFKGS SFHHIIPQFM CQGGDFTNHN GTGGKSIYGK bmy_02091T0/1-292 TAENFRCLCT HEKGFGFKGS SFHRIIPQFM CQGGDFTNHN GTGGKSIYGK ENSBTAP00000055082/1-301 TAENFRCLCT HEKGFGFKGS SFHRIIPQFM CQGGDFTNHN GTGGKSIYGK 351 400 ENSTTRP00000013641/1-312 KFDDENFILK HTGTGLLSMA NSGPNTNGSQ FFLTCDKTDW LDGKHVVFGE ENSP00000361918/1-314 KFDDENFILK HTGPGLLSMA NSGPNTNGSQ FFLTCDKTDW LDGKHVVFGE BACU000408/1-434 KFDDENFILK HTAPGLLSMA NSGPNTNGSQ FFLTCDKTDW LDGKHVVFGE bmy_02091T0/1-292 KFDDENFILK HTAPGLLSMA NSGPNTNGSQ FFLTCDKTDW LDGKHVVFGE ENSBTAP00000055082/1-301 KFDDENFILK HTGPGLLSMA NSGPNTNGSQ FFLTCDKTDW LDGKHVVFGE 401 450 ENSTTRP00000013641/1-312 ITEGLDVLRQ IEVSPDTGAS KAWGPRKKSQ RERNRRGNQR GTGYW----- ENSP00000361918/1-314 VTEGLDVLRQ IEVAPDTKAS KARGSRKNKD GQERNWGK-- -SQKVESHTI BACU000408/1-434 VTEGLDVLRQ IE-------- -AQGSKDGKP KQKVIISD-- -CGEY----V bmy_02091T0/1-292 ITEGLDVLRQ IE-------- -AQGSKDGKP KQKVIISD-- -CGEY----V ENSBTAP00000055082/1-301 ITDGLDVLRQ IE-------- -AQGSKDGKP KQKVIISD-- -CGEY----V