KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 4 Type: P Thu May 15 18:25:40 2014 Check: 00 .. Name: bmy_13293T0/1-408 Len: 581 Check: 5567 Weight: 1.00 Name: ENSBTAP00000055112/1-572 Len: 581 Check: 6590 Weight: 1.00 Name: BACU014659/1-358 Len: 581 Check: 5981 Weight: 1.00 Name: ENSTTRP00000004136/1-579 Len: 581 Check: 381 Weight: 1.00 // 1 50 bmy_13293T0/1-408 MFRGSLGVEQ N--------- ---------- ---------- ---------- ENSBTAP00000055112/1-572 MERKIQRTLQ PVFLAKLSWL RAIGRKHVPQ HPV------- --PRAVNSDM BACU014659/1-358 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000004136/1-579 MGRGLLGGLW PLHIVLWTRI ASTIPPHVPK SDMETEAQKG ETPRHLNSDM 51 100 bmy_13293T0/1-408 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000055112/1-572 MVTDHNGAIK LSQLCKFCDV RSSTCDNQKS CWSNCSITAI CEKPEEVCVA BACU014659/1-358 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000004136/1-579 MVTDDNGAVK LPQLCKFCDV RLSTCDSQKS CWSNCSITAI CEKPQEVCVA 101 150 bmy_13293T0/1-408 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000055112/1-572 VWRKNDENIT LETVCHDPKI AYHGFVLDDA ASSKCIMKER KGSGETFFMC BACU014659/1-358 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000004136/1-579 VWRKNDENIT LETVCHDPKI AYHGFVLDDA A-SECIMKEK KGSGETFFMC 151 200 bmy_13293T0/1-408 ---------- ---RTKYATN NPDLLLVIFQ VTGVSLLPPL GIAIAVIVTF ENSBTAP00000055112/1-572 SCSSEECNDH IIFSEEYTSS NPDLLLVIFQ VTGVSLLPPL GIAIAVIITF BACU014659/1-358 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000004136/1-579 SCSSEECNDH IIFSEEYATN NPDLLLVIFQ VTGVSLLPPL GIAIAVIVTF 201 250 bmy_13293T0/1-408 YCYRVHRQQK LSPAWDSGKP RKLMEFSEHL AIILEDDRSD ISSTCANNIN ENSBTAP00000055112/1-572 YCYRIHRQQK LSPAWDSGKP RKLMEFSEHL AIILEDDRSD ISSTCANNIN BACU014659/1-358 ---------- ---------- ---MEFSEHL AIILEDDRSD ISSTCANNIN ENSTTRP00000004136/1-579 YCYRVHRQQK LSPAWDSGKP RKLMEFSEHL AIILEDDRSD ISSTCANNIN 251 300 bmy_13293T0/1-408 HNTELLPIEL DTLVGKGRFA EVYKAKLRQN TSEQFETVAV KIFPYEEYAS ENSBTAP00000055112/1-572 HNTELLPIEL DTLVGKGRFA EVYKAKLKQN TSEQFETVAV KIFPYEEYAS BACU014659/1-358 HNTELLPIEL DTLVGKGRFA EVYKAKLRQN TSEQFETVAV KIFPYEEYAS ENSTTRP00000004136/1-579 HNTELLPIEL DTLVGKGRFA EVYKAKLRQN TSEQFETVAV KIFPYEEYAS 301 350 bmy_13293T0/1-408 WKTEKDIFSD INLKHENILQ FLTAEERKTE LGKQYWLITA FHAKGNLQEY ENSBTAP00000055112/1-572 WKTEKDIFSD INLKHENILQ FLTAEERKTE LGKQYWLITA FHAKGNLQEY BACU014659/1-358 WKTEKDIFSD INLKHENILQ FLTAEERKTE LGKQYWLITA FHAKGNLQEY ENSTTRP00000004136/1-579 WKTEKDIFSD INLKHENILQ FLTAEERKTE LGKQYWLITA FHAKGNLQEY 351 400 bmy_13293T0/1-408 LTRHVISWED LRRLGSSLAR GIAHLHSDHT LCGRPKMPIV HRDLKSSNIL ENSBTAP00000055112/1-572 LTRHVISWED LRRLGGSLAR GIAHLHSDHT LCGRPKMPIV HRDLKSSNIL BACU014659/1-358 LTRHVISWED LRRLGSSLAR GIAHLHSDHT LCGRPKMPIV HRDLKSSNIL ENSTTRP00000004136/1-579 LTRHVISWED LRRLGGSLAR GIAHLHSDHT LCGRPKMPIV HRDLKSSNIL 401 450 bmy_13293T0/1-408 VKGDLTCCLC DFGLSLRLDP TLSVDDLANS GQVGTARYMA PEVLESRMNL ENSBTAP00000055112/1-572 VKGDLTCCLC DFGLSLRLDP TLSVDDLANS GQVGTARYMA PEVLESRMNL BACU014659/1-358 VKGDLTCCLC DFGLSLRLDP TLSVDDLANS GQVGTARYMA PEVLESRMNL ENSTTRP00000004136/1-579 IKGDLTCCLC DFGLSLRLDP TLSVDDL-NS GQVGTARYMA PEVLESRMNL 451 500 bmy_13293T0/1-408 ENVESFKQTD VYSMALVLWE MTSRCSAVGE VKDYEPPFGS KVREHPCVES ENSBTAP00000055112/1-572 ENVESFKQTD VYSMALVLWE MTSRCNAVGE VKDYEPPFGS KVREHPCVES BACU014659/1-358 ENVESFKQTD VYSMALVLWE MTSRCSAVGE VKDYEPPFGS KVREHPCVES ENSTTRP00000004136/1-579 ENVESFKQTD VYSMALVLWE MTSRCSAVGE VKDYEPPFGS KVREHPCVES 501 550 bmy_13293T0/1-408 MKDNVLRDRG RPEIPSSWLN HQLWQ---EI LSE-----KE GVFVSQLARK ENSBTAP00000055112/1-572 MKDNVLRDRG RPEIPSSWLN HQGIQTVCET LAECWDHDPE ARLTAQCVAE BACU014659/1-358 MKDNVLRDRG RPEIPSSWLN HQGIQMVCET LAECWDHDPE ARLTAQCVAE ENSTTRP00000004136/1-579 MKDNVLRDRG RPEIPSSWLN HQGIQMVCET LAECWDHDPE ARLTAQCVAE 551 600 bmy_13293T0/1-408 GLLCAQAAAA MVGKAIHP-- ---------- - ENSBTAP00000055112/1-572 RFSELEHLDR LSGRSSSEEK IPEDGSLNTT K BACU014659/1-358 RFSELEHLDR LSGRSSSEEK IPEDGSLNTT K ENSTTRP00000004136/1-579 RFSELEHLDR LSGRSSSEEK IPEDGSLNTT K