KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 18:25:52 2014 Check: 00 .. Name: bmy_21083T0/1-335 Len: 517 Check: 6917 Weight: 1.00 Name: ENSBTAP00000055147/1-469 Len: 517 Check: 6193 Weight: 1.00 Name: BACU013456/1-484 Len: 517 Check: 563 Weight: 1.00 Name: ENSP00000345445/1-469 Len: 517 Check: 5234 Weight: 1.00 Name: ENSTTRP00000014530/1-468 Len: 517 Check: 4063 Weight: 1.00 // 1 50 bmy_21083T0/1-335 MGTVHARSLE PLPASGPDFG ALGEEAEFVE VEPEAKQEIL ENKD------ ENSBTAP00000055147/1-469 MGTVHARSLE PLPASGPDFG ALGEEAEFVE VEPEAKQEIL ENKDVVVQHV BACU013456/1-484 MGTVHARSLE PLPASGPDFG ALGEEAEFVE VEPEAKQEIL ENKDVVVQHV ENSP00000345445/1-469 MGTVHARSLE PLPSSGPDFG GLGEEAEFVE VEPEAKQEIL ENKDVVVQHV ENSTTRP00000014530/1-468 MGTVHARSLE PLPASG-DFG ALGEEAEFVE VEPEAKQEIL ENKDVVVQHV 51 100 bmy_21083T0/1-335 ---------- ---------- --------VM RRSHEAREKL LRLGIFRQVD ENSBTAP00000055147/1-469 HFDGLGRTKD DIIMYEIRDV FKAKNLIEVM RKSHEAREKL LRLGIFRQVD BACU013456/1-484 HFDGLGRTKD DIIMCEIGGV FKAKNL--VM RRSHEAREKL LRLGIFRQVD ENSP00000345445/1-469 HFDGLGRTKD DIIICEIGDV FKAKNLIEVM RKSHEAREKL LRLGIFRQVD ENSTTRP00000014530/1-468 HFDGLGRTKD DIIMCEIGDV FKAKNLIEVM RKSHEAREKL LRLGIFRQVD 101 150 bmy_21083T0/1-335 VLIDTCQGDN ALPNGLDVTF EVTELRRLTG SYNTMVGNNE GSMVLGLKLP ENSBTAP00000055147/1-469 VLIDTCQGDD ALPNGLDVTF EVTELRRLTG SYNTMVGNNE GSMVLGLKLP BACU013456/1-484 VLIDTCQGDN ALPNGLDVTF EVTELRRLTG SYNTMVGNNE GSMVLGLKLP ENSP00000345445/1-469 VLIDTCQGDD ALPNGLDVTF EVTELRRLTG SYNTMVGNNE GSMVLGLKLP ENSTTRP00000014530/1-468 VLIDTCQGDN ALPNGLDVTF EVNELRRLTG SYNTMVGNNE GSMVLGLKLP 151 200 bmy_21083T0/1-335 NLLGRAEKVT FQFSYGTKET SYGLSFFKPQ PGNFERKF-- ---------- ENSBTAP00000055147/1-469 NLLGRAEKVT FQFSYGTKET SYGLSFFKPQ PGNFDRNFSV NDHTIMEMFP BACU013456/1-484 NLLGRAEKVT FQFSYGTKET SYGLSFFKPQ PGNFERNFSV NLYKVTGQFP ENSP00000345445/1-469 NLLGRAEKVT FQFSYGTKET SYGLSFFKPR PGNFERNFSV NLYKVTGQFP ENSTTRP00000014530/1-468 NLLGRAEKVT FQFSYGTKET SYGLSFFKPQ PGHFERNFSV NVYKVTGQFP 201 250 bmy_21083T0/1-335 FQHLSGVEC- ---------- ---------- -W-------- ---------- ENSBTAP00000055147/1-469 WSSLGGQSIG VSASTSFPTW KTSHTVKWEG VWRELGCLSR VASFAVRKES BACU013456/1-484 WSSLRETDRG LSAEYSFPIW KTSHTVKWEG VWRELGCLAR TVSFAVRKES ENSP00000345445/1-469 WSSLRETDRG MSAEYSFPIW KTSHTVKWEG VWRELGCLSR TASFAVRKES ENSTTRP00000014530/1-468 WSSLRETDRG VSAEYSFPIW KTSHTVKWEG VWRELGCLAR TVSFAVRKES 251 300 bmy_21083T0/1-335 ---------- ---------- ---------- ---------- ---------Y ENSBTAP00000055147/1-469 GHSLKSSLSH SMVIDSRNSS ILPKRGALLK VNQELAGYTG GDVSFLKEDF BACU013456/1-484 GHSLKSSLSH AMVIDSRNPS ILPRRGALLK VNQELAGYTG GDVSFIKEDF ENSP00000345445/1-469 GHSLKSSLSH AMVIDSRNSS ILPRRGALLK VNQELAGYTG GDVSFIKEDF ENSTTRP00000014530/1-468 GHSLKSSLSH AMVIDSRNPS ILPRRGALLK VNQELAGYTG GDVSFIKEDF 301 350 bmy_21083T0/1-335 PLVINRQVLL ---------- -----IGD-- ---------- ---------- ENSBTAP00000055147/1-469 ELQLNKQLIL DTVFSASLWG GMLVPMGDKP SSIADRFYLG GPTSVRGFSM BACU013456/1-484 ELQLNKQLIL DSVFSASLWG GVLVPTGDKP SSIADRFYLG GPTSVRGFNM ENSP00000345445/1-469 ELQLNKQLIF DSVFSASFWG GMLVPIGDKP SSIADRFYLG GPTSIRGFSM ENSTTRP00000014530/1-468 ELQLNKQLIL DSVFSASLWG GMLVPIGDKP SSIADRFYLG GPTSVRGFNM 351 400 bmy_21083T0/1-335 ---------- YLGGEAYWAG GLHLYTPLPF RPGQGGFGEL FRTHFFLNAG ENSBTAP00000055147/1-469 HSVGPQSEGD YLGGEAYWAG GLHLYTPLPF RPGQGGFGEL FRTHFFLNAG BACU013456/1-484 HSVGPQSEGD YLGGEAYWAG GLHLYTPLPF RPGQGGFGEL FRTHFFLNAG ENSP00000345445/1-469 HSIGPQSEGD YLGGEAYWAG GLHLYTPLPF RPGQGGFGEL FRTHFFLNAG ENSTTRP00000014530/1-468 HSVGPQSEGD YLGGEAYWAG GLHLYTPLPF RPGQGGFGEL FRTHFFLNAG 401 450 bmy_21083T0/1-335 NLCNLNYGEG PRAHIRKLAE CIRWSYGAGI VLRLGNIARL ELNYCVPMGV ENSBTAP00000055147/1-469 NLCNLNYGEG PKAHIRKLAE CIRWSYGAGI VLRLGNIARL ELNYCVPMGV BACU013456/1-484 NLCNLNYGEG PRAHIRKLAE CIRWSYGAGI VLRLGNIARL ELNYCVPMGV ENSP00000345445/1-469 NLCNLNYGEG PKAHIRKLAE CIRWSYGAGI VLRLGNIARL ELNYCVPMGV ENSTTRP00000014530/1-468 NLCNLNYGEA LRAHIRKLAE CIRWSYGAGI VLRLGNIARL ELNYCVPMGV 451 500 bmy_21083T0/1-335 QGGDRTSGDK RRRSCWISAQ SEAEMSDLQE EGKNXINLPM SPASVEIHPE ENSBTAP00000055147/1-469 QRGDRICDG- --------VQ FGAGIRFL-- ---------- ---------- BACU013456/1-484 QGGDRVGSD- --------TP NQAMLNVRRQ EKTLVLDLSP ERGPE----- ENSP00000345445/1-469 QTGDRICDG- --------VQ FGAGIRFL-- ---------- ---------- ENSTTRP00000014530/1-468 QGGDRICDG- --------VQ FGAGIRFL-- ---------- ---------- 501 550 bmy_21083T0/1-335 DTLLGIIGFS SSLSWAS ENSBTAP00000055147/1-469 ---------- ------- BACU013456/1-484 ---------- ------- ENSP00000345445/1-469 ---------- ------- ENSTTRP00000014530/1-468 ---------- -------