KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 4 Type: P Thu May 15 18:25:53 2014 Check: 00 .. Name: ENSP00000308292/1-283 Len: 327 Check: 6025 Weight: 1.00 Name: ENSBTAP00000055151/1-288 Len: 327 Check: 4080 Weight: 1.00 Name: bmy_04272T0/1-285 Len: 327 Check: 5050 Weight: 1.00 Name: ENSTTRP00000003416/1-291 Len: 327 Check: 4360 Weight: 1.00 // 1 50 ENSP00000308292/1-283 ---------- ---------- ---------- MKCYFTDHRG EQSPTDGTTL ENSBTAP00000055151/1-288 ---------- ---------- ---------- MKQRFTDRRG EQSPTDQATL bmy_04272T0/1-285 ---------- ---------- ---------- MKRHFTDHRG EQSPTDGTTL ENSTTRP00000003416/1-291 EATRPGASRA SALPEPTLTQ QLELVPGHWC MKRHFTDHRG EQSPTAGTVL 51 100 ENSP00000308292/1-283 SLTSPESTEE SVEVFWP--- -----GTIQR EGSSPRPGPA IPREEGLYFA ENSBTAP00000055151/1-288 SLASPESTEE SVQARRT--- -----GPVKR EQLSPPPGPA IPHAENVYFS bmy_04272T0/1-285 SLASPGSMEE SVEVHWSERG AVSAAWPGR- ---CPRGG-- ------IYFS ENSTTRP00000003416/1-291 SLASPGSMEE SVEVHWS--- -----WTSKR EEPSPRPGLA VSHEEDIYFS 101 150 ENSP00000308292/1-283 ARDRGMRDWS SSPSSE-SSE YQSYSQYQSC CSCMCDEDNA APQSVCAFYT ENSBTAP00000055151/1-288 GKGRGMLSWS SSPSSQSSSE YQSYSQYQSC HSCTYGDQDA AQQSMCAFYT bmy_04272T0/1-285 GEGRGMMGWG SSPSSRSSSE HQSYSQCQSC SSSTCGGEDA ARQSMCAFYT ENSTTRP00000003416/1-291 GKGRGTLGWS SSPSSRPSSE YQSYSQYQSC SSSTCGGEDT ARQSMCAFYT 151 200 ENSP00000308292/1-283 HVQTVRGVAV AWETEAGFEP VTRKPRIHEA QFIKRQRWNG SSFEMASNTD ENSBTAP00000055151/1-288 HVKTVQGVAV AWETDSGFEP VTRQPRIREA EFIRRQRRKG SSFEMASNTD bmy_04272T0/1-285 HVKAVQGVTV AWETDCGFEP VSRQPRIHEA EFIKRQRRKG SSFEMASNTD ENSTTRP00000003416/1-291 HV-TVQGVAV AWETDCGFEL VSRQPRIHEA EFIKRQRRKG SSFEMASDTD 201 250 ENSP00000308292/1-283 MRWDLEACKS NCSPEPEDID L---LECCLQ ELREPPDWLV TTNYGVRCVA ENSBTAP00000055151/1-288 LRWELEASKN NTSSEPEDAE LLAPLECCLQ ELRDTPDWLV TTNCGLRCVA bmy_04272T0/1-285 LRWELEASRN TTCPEPDDTE LLVPLECCLQ ELRATPDWLV TTNHGLRCVA ENSTTRP00000003416/1-291 LRWELEDGKN NTCPEPDDTE LLVPLECCLQ ELRATPDWLV TTNHGLRCVA 251 300 ENSP00000308292/1-283 CCRVLPSLDA LLEHAQHGIR EGFSCQIFFE EMLERRRAQG QAHDQQLEEE ENSBTAP00000055151/1-288 CCRVFPTLEA LLEHAQYGIQ EGFSCQIFFE EMLERRRARD QGQEQEPEEE bmy_04272T0/1-285 CCRVFPTLEV LLEHAQYGIQ EGFSCQIFYK ELLERRWARG QVQEQEPEEE ENSTTRP00000003416/1-291 CCRVFPTLEV LLEHAQYGIQ EGFSCQIFYE ELLERRWARG QVQEQVPEGE 301 350 ENSP00000308292/1-283 -QSPSDNSEC SRPQGEVLSA QQQEKQ- ENSBTAP00000055151/1-288 QESASDSSKG PRPRVTVPSS QSQSQK- bmy_04272T0/1-285 RQSTSDSSES PRPHVKLLPS QSRSEKQ ENSTTRP00000003416/1-291 ---------- ---------- -------