KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 18:25:56 2014 Check: 00 .. Name: bmy_14711T0/1-262 Len: 359 Check: 6474 Weight: 1.00 Name: ENSBTAP00000055171/1-308 Len: 359 Check: 7812 Weight: 1.00 Name: ENSP00000346300/1-303 Len: 359 Check: 8896 Weight: 1.00 Name: BACU017123/1-351 Len: 359 Check: 5102 Weight: 1.00 Name: ENSTTRP00000008677/1-303 Len: 359 Check: 9767 Weight: 1.00 // 1 50 bmy_14711T0/1-262 MSRGR-EAVD GGA-EAGAAD GEPLVKVLRS QGW-----RE SPPCSG---- ENSBTAP00000055171/1-308 MSSARFDSSD RSAWYMGPVS RQEAQTRLQG QRHGVFLVRD SSTCPGDYVL ENSP00000346300/1-303 MSSARFDSSD RSAWYMGPVS RQEAQTRLQG QRHGMFLVRD SSTCPGDYVL BACU017123/1-351 MSSARFDSSD RSAWYMGPVS RQEAQTRLQG QRHGVFLVRD SSTCPGDYVL ENSTTRP00000008677/1-303 MSSARFDSSD RSAWYMGPVS RQEAQTRLQG QRHGVFLVRD SSTCPGDYVL 51 100 bmy_14711T0/1-262 PPRGKKRRKH FEQTECC--- NMCFNLGDHV V--------- ---------- ENSBTAP00000055171/1-308 SVSENSRVSH HIAPPPPPRS DRLWAVGLHA VDDVCSLGSR SLVSIHRLSP ENSP00000346300/1-303 SVSENSRVSH YIINSLP--- NRRFKIGDQE FDHLPAL--L EFYKIHYLDT BACU017123/1-351 SVSENSRVSH YIINSLP--- NRRFKIGDQE FDHLPAL--L EFYKIHYLDT ENSTTRP00000008677/1-303 SVSENSRVSH YIINSLP--- NRRFKIGDQE FDHLPAL--L EFYKIHYLDT 101 150 bmy_14711T0/1-262 ---------M YPSPPMGSVS APSLPTAEEN LEYVRTLYDF PGNDAEDLPF ENSBTAP00000055171/1-308 ELLVEPAGPW YPSPPVGSVS APSLPAAEET LEYVRTLYDF PGNDAEDLPF ENSP00000346300/1-303 TTLIEPA-PR YPSPPMGSVS APNLPTAEDN LEYVRTLYDF PGNDAEDLPF BACU017123/1-351 TTLIEPA-PR YPSPPMGSVS APSLPTAEEN LEYVRTLYDF PGNDAEDLPF ENSTTRP00000008677/1-303 TTLIEPA-PR YPSPPMGSVS APSLPTAEEN LEYVRTLYDF PGNDAEDLPF 151 200 bmy_14711T0/1-262 KKGEILVIIE KPEEQWWSAR NKDGRVGMIP VPYVEKLVRS SPHGKHGNRN ENSBTAP00000055171/1-308 KKGEILVIVE KPEEQWWSAR NKDGRVGMIP VPYVEKLVRA SAQGKPGNRN ENSP00000346300/1-303 KKGEILVIIE KPEEQWWSAR NKDGRVGMIP VPYVEKLVRS SPHGKHGNRN BACU017123/1-351 KKGEILVIIE KPEEQWWSAR NKDGRVGMIP VPYVEKLVRS SPHGKHGNRN ENSTTRP00000008677/1-303 KKGEILVIIE KPEEQWWSAR NKDGRVGMIP VPYVEKLVRS SPHGKHGNRN 201 250 bmy_14711T0/1-262 SNSYGIPEPA HAFFWTKSNT QVNYTWRFGS ESEVTSPSHV GSK----ERA ENSBTAP00000055171/1-308 SSSYGVPEPA HAY--AQPQT TAPPPA-AGA PGAAVSPLPS TQNGPVFAKA ENSP00000346300/1-303 SNSYGIPEPA HAY--AQPQT TTPLPAVSGS PGAAITPLPS TQNGPVFAKA BACU017123/1-351 SNSYGIPEPA HAY--AQPQT TAPLPAVSST PGAAVSPLPS TQNGPVFAKA ENSTTRP00000008677/1-303 SNSYGIPEPA HAY--AQPQT TAPLPAVSST PGAAVSPLPS TQNGPVFAKA 251 300 bmy_14711T0/1-262 SEAGAGAGED LVLLYFA--- ---------- ---------- ---------- ENSBTAP00000055171/1-308 IQKRVPCAYD KTALALE--- ---------- ---------- ---------- ENSP00000346300/1-303 IQKRVPCAYD KTALALE--- ---------- ---------- ---------- BACU017123/1-351 IQKRVPCAYD KTALALELCD FCTVSTAAPG SICSRTFLGS NLAVVFTRDS ENSTTRP00000008677/1-303 IQKRVPCAYD KTALALE--- ---------- ---------- ---------- 301 350 bmy_14711T0/1-262 ---------- -----VEE-Q EGNQKRLLPQ MEAWLSRPAG LLIPTQTCPC ENSBTAP00000055171/1-308 ---------- -----VGDIV KVTRMNINGQ WEGEVNGRKG LFPFTHVKII ENSP00000346300/1-303 ---------- -----VGDIV KVTRMNINGQ WEGEVNGRKG LFPFTHVKIF BACU017123/1-351 NVVIIRVFLF YDFCTVGDIV KVTRMNINGQ WEGEVNGRKG LFPFTHVKII ENSTTRP00000008677/1-303 ---------- -----VGDIV KVTRMNINGQ WEGEVNGRKG LFPFTHVKII 351 400 bmy_14711T0/1-262 TVHTSAP-- ENSBTAP00000055171/1-308 DPQNPDESE ENSP00000346300/1-303 DPQNPDENE BACU017123/1-351 DPQNPDENE ENSTTRP00000008677/1-303 DPQNPDENE