KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 4 Type: P Thu May 15 18:26:06 2014 Check: 00 .. Name: ENSBTAP00000055185/1-302 Len: 327 Check: 842 Weight: 1.00 Name: ENSTTRP00000013380/1-304 Len: 327 Check: 1589 Weight: 1.00 Name: bmy_01956T0/1-300 Len: 327 Check: 127 Weight: 1.00 Name: BACU020168/1-312 Len: 327 Check: 8415 Weight: 1.00 // 1 50 ENSBTAP00000055185/1-302 MELRGQRNAL HTNKCCPLTN HCRRILLANT AASAVRIWLL RGQLLLLLLC ENSTTRP00000013380/1-304 ---------- ----MCPLTN RCRRSLLPNT AAPEVRIWLL RGQLPLLLLC bmy_01956T0/1-300 MKLQGRRSAF NNNKCCPLTN RCRRILFPNT AAPEVRIWLL RGQLPLLLLC BACU020168/1-312 ---------- -----CPLTN RCRRILLPNT AAPEVRIWLL RGQLPLLLLC 51 100 ENSBTAP00000055185/1-302 SGLQRPTSWA EIAVKIDFDL TPNSFDDQYR GCSQQVMEML LQGDYFMEEL ENSTTRP00000013380/1-304 SSLQRPTVS- -VAVKIDFDL APGSFDDQYQ GCSQQVMEDL IQGDYFTKEL bmy_01956T0/1-300 SSLQRPT--- -VAVKIDFDL APSSFDDQYQ GCSQQVMEDL IQGDYFTKEL BACU020168/1-312 SSLQRPTVSY HGGVKIDFDL APSSFDDQYQ GCSQQVMEDL IQGDYFTKEL 101 150 ENSBTAP00000055185/1-302 ESSKHYRKVW HQTHLNWLNQ EKPLPGNMTI THALAVSVYL SDDRVHLDFS ENSTTRP00000013380/1-304 ESRRNYHRVW QRAHLDWLTQ GKALPENMTV THAVAILVYS SNGSVRSDFS bmy_01956T0/1-300 ESGRNYHRVW QRAHLTWLRQ GKALPENMTI THAVAILVYS SNDSVRSDFS BACU020168/1-312 ESGRNYHRVW QRAHLTWLRQ GKALPENMTI THAVAILVYS SNDSVRSDFS 151 200 ENSBTAP00000055185/1-302 RAMASAAGSP QQYKHSFRFK YLHYFLTSAI QLLRKEIVSR KDSLCYEVQH ENSTTRP00000013380/1-304 RAMASAAGSP QQYKRSFHF- YLHYYLTTAI QLLRKEIVTR NDSLY--VHH bmy_01956T0/1-300 RAMASAAGSP QQYKRSFHFK YLHYYLTTAI QLLRKEIVTR NDSLCYEVHH BACU020168/1-312 RAMASAAGSP QQYKHSFHFK YLHYYLTTAI QLLRKETVTR NDSLCYEVHH 201 250 ENSBTAP00000055185/1-302 ELKGVYLRAP VGSIVRFGQF LSTSPAREQA QRFGNQTLFT MLTCLGAPVQ ENSTTRP00000013380/1-304 -VKG-YLEAP MGA-IRFGQF LST-FLREEA QKFGDQTLFT ILTCLGAPVQ bmy_01956T0/1-300 EVKGVYLEAP MGATIRFGQF LSTSLLREEA QKFGDQTLFT ILTCLGAPVQ BACU020168/1-312 EVKAVYLEAP MGATIRFGQF LPTSLLREEA QKFGDQTLFT ILTCLGAPVQ 251 300 ENSBTAP00000055185/1-302 DFSLKKEVLV PPYELFKVVN VSYHPRGNWL QLLSNGTQST YNCQLLKG-- ENSTTRP00000013380/1-304 DFSLKKEVLV PPYELFEVVN TSYHPRGNWL QLQSTGTQSA YNCQLLKASS bmy_01956T0/1-300 DFSLKKEVLV PPYELFEVVN TSYHPRGNWL QLRSTGTQST YNCQLLKG-- BACU020168/1-312 DFSLKKEVLV PPYELFEVVN TSYHPRGNWL QLRSTGTQST YNCQLLKASS 301 350 ENSBTAP00000055185/1-302 ---------- --------IV IN----- ENSTTRP00000013380/1-304 KKCIPIPVVI ASLSFLTCVI ISSKSRA bmy_01956T0/1-300 ---------- --------IV IDPN--- BACU020168/1-312 KKCIPTPIVI ASLSFLTCVI ISSKSRA