KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 4 Type: P Thu May 15 18:26:08 2014 Check: 00 .. Name: BACU006093/1-114 Len: 974 Check: 3228 Weight: 1.00 Name: bmy_14575T0/1-611 Len: 974 Check: 4859 Weight: 1.00 Name: ENSTTRP00000001405/1-974 Len: 974 Check: 386 Weight: 1.00 Name: ENSBTAP00000055217/1-835 Len: 974 Check: 6008 Weight: 1.00 // 1 50 BACU006093/1-114 ---------- ---------- ---------- ---------- ---------- bmy_14575T0/1-611 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000001405/1-974 MAAEEVLQTV DHYKTEIERL TKELTETTHE KIQAAEYGLV VLEEKLTLKQ ENSBTAP00000055217/1-835 ---------- ---------- ---------- ---------- ---------- 51 100 BACU006093/1-114 ---------- ---------- ---------- ---------- ---------- bmy_14575T0/1-611 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000001405/1-974 QYDELEADYD SLRQELEQLK EAFGQSFSIH RKVAEDGETR EETLLQESAS ENSBTAP00000055217/1-835 ---------- ---------- ---------- ---------- ---------- 101 150 BACU006093/1-114 ---------- ---------- ---------- ---------- ---------- bmy_14575T0/1-611 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000001405/1-974 KEAYYLGKIL EMQNELKQSR AVVANVQAEN ERLTAVVQDL KENNEMVELQ ENSBTAP00000055217/1-835 ---------- ---------- ---------- ---------L FQNNEMGELQ 151 200 BACU006093/1-114 ---------- ---------- ---------- ---------- ---------- bmy_14575T0/1-611 ---------- ---------- ---------- ---------- MSKCEWVKLI ENSTTRP00000001405/1-974 RIRMKDEIRE YKFREARLLQ DYTELEEENI TLQKLVSTLK QNQVEYEGLK ENSBTAP00000055217/1-835 RIRMKDEIRE YKFREARLLQ DYTELEEENI TLQKLVSTLK QNQVEYEGLK 201 250 BACU006093/1-114 ---------- ---------- ---------- ---------- ---------- bmy_14575T0/1-611 TGI------- ---------- ---------- ---ALKSFR- ---------- ENSTTRP00000001405/1-974 HEIKRFEEET VLLNSQLEDA IRLKEIAEHQ LEEALETLKN EREQKNSLRK ENSBTAP00000055217/1-835 HEIKRFEEET VLLNSQLEDA IRLKEIAEHQ LEEALETLKN EREQKNSLRK 251 300 BACU006093/1-114 ---------- ---------- ---------- ---------- ---------- bmy_14575T0/1-611 ---------- ---------- ---------- ---------- --------DF ENSTTRP00000001405/1-974 ELSQYITLND NHISISVDGL KFAEDGSEPN NDDKMNGHIH GPLVKLNGDY ENSBTAP00000055217/1-835 ELSQYITLND NHISISVDGL KFAEDGSEPN NDDKMNGHIH GPLVKLNGDY 301 350 BACU006093/1-114 ---------- ---------- ---------- ---------- ---------- bmy_14575T0/1-611 LLP------- ---------- ---------- ---LQVEREK AILLANLQES ENSTTRP00000001405/1-974 RTPTLRKGES LHPVSDLFSE LNISEIQKLK QQLMQVEREK AILLANLQES ENSBTAP00000055217/1-835 RTPTLRKGES LHPVSDLFSE LNISEIQKLK QQLMQVEREK AILLANLQES 351 400 BACU006093/1-114 ---------- ---------- ---------- ---------- ---------- bmy_14575T0/1-611 QTQLEHTKGA LTEQHERVHR LTEHVNAMRG LQSSKELKQL DGEKGRDSGE ENSTTRP00000001405/1-974 QTQLEHTKGA LTEQHERVHR LTEHVNAMRG LQSSKELKQL DGEKGQDSGE ENSBTAP00000055217/1-835 QTQLEHTKGA LTEQHERVHR LTEHVNAMRG LQSSKELKEL DGEKGRDSGE 401 450 BACU006093/1-114 ---------- ---------- MAAEEVL--- ---------- -QTVDHYKTE bmy_14575T0/1-611 ETHDYEVDIN GLEILECKYR VAVTEVIDLK AEIKALKEKY NKSVENYTEE ENSTTRP00000001405/1-974 ETHDYEVDIN GLEILECKYR VAVTEVIDLK AEIKALKEKY NKSVENYTEE ENSBTAP00000055217/1-835 EAHDYEVDIN GLEILECKYR VAVTEVIDLK AEIKALKEKY NKSIENYTEE 451 500 BACU006093/1-114 ---------- -------IER LTKE------ ---------- -LTETTHEKI bmy_14575T0/1-611 KAKYESKIQM YDEQITSLEK TTKESGEKMA HMEKELQKMT SIANENHNTL ENSTTRP00000001405/1-974 KTKYEGKIQM YDEQITGLEK TTKESGEKMA HMEKELQKMT SIANENHNTL ENSBTAP00000055217/1-835 KAKYESKIQM YDEQVTSLEK TTKESGEKMA HMENELQKMT SIANENHNTL 501 550 BACU006093/1-114 QAAEYGLVVL EEKLT----- ---------- ---------- ---------- bmy_14575T0/1-611 NTAQDELVTF SEELAQLYHH VCLCNNETPN RVMLDYYRQS RVTRSGSLKG ENSTTRP00000001405/1-974 NTAQDELVTF SEELAQLYHH VCLCNNETPN RVMLDYYRQS RVTRSGSLKG ENSBTAP00000055217/1-835 NTAQDELVTF SEELAQLYHH VCLCNNETPN RVMLDYYRQS RVTRSGSLKG 551 600 BACU006093/1-114 ---------- ---------- ---------- ---------- ---------- bmy_14575T0/1-611 PDDPRGLLSP RLVRRGVSSP VETRTSPEPV SKENTEASKE PSPTKTPTIS ENSTTRP00000001405/1-974 PDDPRGLLSP RLARRGVSSP VETRTSPEPV SKENTEASKE PSPTKTPTIS ENSBTAP00000055217/1-835 PDDPRGLLSP RLVRRGVSSP VETRTSPEPV SKENTEASKE PSPTKTPTIS 601 650 BACU006093/1-114 ---------- ---------- ---------- ---------- ---------- bmy_14575T0/1-611 PVITAPPSSP VLDTSDIRKE PMNIYNLNAI IRDQIKHLQK AVDRSLQLSR ENSTTRP00000001405/1-974 PVITAPPSSP VLDTSDIRKE PMNIYNLNAI IRDQIKHLQK AVDRSLQLSR ENSBTAP00000055217/1-835 PVITAPPSSP VLDTSDIRKE PMNIYNLNAI IRDQIKHLQK AVDRSLQLSR 651 700 BACU006093/1-114 ---------- ---------- ---------- ---------- ---------- bmy_14575T0/1-611 QRAAARELAP MIDKDKEALM EEILKLKSLL STKREQIATL RAVLKANKQT ENSTTRP00000001405/1-974 QRAAARELAP MIDKDKEALM EEILKLKSLL STKREQIATL RAVLKANKQT ENSBTAP00000055217/1-835 QRAAARELAP MIDKDKEALM EEILKLKSLL STKREQIATL RAVLKANKQT 701 750 BACU006093/1-114 -------LKQ QYDELEA--- -EYDSLRQEL EQLKE--AVY SS-------- bmy_14575T0/1-611 AEVALANLKN KYENEKAMVT ETMTKLRNEL KALKEDAATF SSLRAMFATR ENSTTRP00000001405/1-974 AEVALANLKN KYENEKAMVT ETMTKLRNEL KALKEDAATF SSLRAMFATR ENSBTAP00000055217/1-835 AEVALANLKN KYENEKAMVT ETMTKLRNEL KALKEDAATF SSLRAMFATR 751 800 BACU006093/1-114 ---------- ---------- ---------- ---------- ------DNNA bmy_14575T0/1-611 CDEYVTQLDE MQRQLAAAED EKKTLNTLLR MAIQQKLALT QRLEDLEFDH ENSTTRP00000001405/1-974 CDEYVTQLDE MQRQLAAAED EKKTLNTLLQ MAIQQKLALT QRLEDLEFDH ENSBTAP00000055217/1-835 CDEYVTQLDE MQRQLAAAED EKKTLNTLLQ MAIQQKLALT QRLEDLEFDH 801 850 BACU006093/1-114 DFSRRSHTK- --------RE AAEPSVPEPR VD-------- ---------- bmy_14575T0/1-611 EQSRRSKGKL GKSKIGSPKV SGEASVTVPT IDTYLLHSQG PQTPNIRVSS ENSTTRP00000001405/1-974 EQSRRSKGKL GKSKIGSPKV SGEASVTVPT IDTYLLHSQG PQTPNIRVSS ENSBTAP00000055217/1-835 EQSRRSKGKL GKSKIGSPKV SGEASVTVPT IDTYLLHSQG PQTPNIRVSS 851 900 BACU006093/1-114 ---------- ---------- -----VSGLL SVA------- ---------- bmy_14575T0/1-611 GTQRKRQFSP SLCDQSRPRT SGASYLQNLL RVPPDPTSTE SFLLKGPPSM ENSTTRP00000001405/1-974 GTQRKRQFSP SLCDQSRPRT SGASYLQNLL RVPPDPTSTE SFLLKGPPSM ENSBTAP00000055217/1-835 GTQRKRQFSP SLCDQSRPRT SGASYLQNLL RVPPDPTSTE SFLLKGPPSM 901 950 BACU006093/1-114 ---------- ----LSL--- ---------- ---------- ---------- bmy_14575T0/1-611 SEFIQGHRLS KEKRLTVAPP ---------- ---------- ---------- ENSTTRP00000001405/1-974 SEFIQGHRLS KEKRLTVAPP DCQQPAASVP PQRSQLAGGQ DCPTLSPDIA ENSBTAP00000055217/1-835 SEFIQGHRLS KEKRLTVAPP DCQQPAASVP PQCSQLAGRQ DCPAVSPDVA 951 1000 BACU006093/1-114 ---------- ---------- ---- bmy_14575T0/1-611 ---------- ---------- ---- ENSTTRP00000001405/1-974 LPDEQPHSSS QCAPLHCLSK PPYP ENSBTAP00000055217/1-835 LPDEQPHSSS QCAPLHCLSK PPYP