KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 18:26:09 2014 Check: 00 .. Name: BACU006630/1-238 Len: 409 Check: 7510 Weight: 1.00 Name: ENSP00000380479/1-359 Len: 409 Check: 7036 Weight: 1.00 Name: ENSBTAP00000055220/1-388 Len: 409 Check: 2645 Weight: 1.00 Name: bmy_10407T0/1-371 Len: 409 Check: 5086 Weight: 1.00 Name: ENSTTRP00000011054/1-386 Len: 409 Check: 7238 Weight: 1.00 // 1 50 BACU006630/1-238 ---------- ---------- ---------M ETQLSNGPTC NNTANGPTTI ENSP00000380479/1-359 ---------- ---------- ---------M ETQLSNGPTC NNTANGPTTI ENSBTAP00000055220/1-388 MAVRLCDVAS LLRSGSWAAE PWTGQVIAAM ETQLSNGPTC NNTANGPTTI bmy_10407T0/1-371 ---------- ---------- ----MVIAAM ETQLSNGPTC NNTANGPTTI ENSTTRP00000011054/1-386 MAVRLCDVAS LLRSGSWAAE PWTG-VIAAM ETQLSNGPTC NNTANGPTTI 51 100 BACU006630/1-238 NNNCSSPVDS GNTEDSKTNL IVNYLPQNMT QEELKSLFGS IGEIESCKLV ENSP00000380479/1-359 NNNCSSPVDS GNTEDSKTNL IVNYLPQNMT QEELKSLFGS IGEIESCKLV ENSBTAP00000055220/1-388 NNNCSSPVDS GNTEDSKTNL IVNYLPQNMT QEELKSLFGS IGEIESCKLV bmy_10407T0/1-371 NNNCSSPVDS GNTEDSKTNL IVNYLPQNMT QEELKSLFGS I--------- ENSTTRP00000011054/1-386 NNNCSSPVDS GNTEDSKTNL IVNYLPQNMT QEELKSLFGS IGEIESCKLV 101 150 BACU006630/1-238 RDKITGQSLG YGFVNYIDPK DAEKAINTLN GLRLQTKTIK ---------- ENSP00000380479/1-359 RDKITGQSLG YGFVNYIDPK DAEKAINTLN GLRLQTKTIK ---------- ENSBTAP00000055220/1-388 RDKITGQSLG YGFVNYIDPK DAEKAINTLN GLRLQTKTIK ---------- bmy_10407T0/1-371 -----GQSLG YGFVNYIDPK DAEKAINTLN GLRLQTKTIK SDLICEEQFE ENSTTRP00000011054/1-386 RDKITGQSLG YGFVNYIDPK DAEKAINTLN GLRLQTKTIK ---------- 151 200 BACU006630/1-238 ---------- VSYARPSSAS IRDANLYVSG LPKTMTQKEL EQLFSQYGRI ENSP00000380479/1-359 ---------- VSYARPSSAS IRDANLYVSG LPKTMTQKEL EQLFSQYGRI ENSBTAP00000055220/1-388 ---------- VSYARPSSAS IRDANLYVSG LPKTMTQKEL EQLFSQYGRI bmy_10407T0/1-371 KPLARAFICL VSYARPSSAS IRDANLYVSG LPKTMTQKEL EQLFSQYGRI ENSTTRP00000011054/1-386 ---------- VSYARPSSAS IRDANLYVSG LPKTMTQKEL EQLFSQYGRI 201 250 BACU006630/1-238 ITSRILVDQV TGISRGVGFI RFDKRIEAEE AIKGLNGQKP PAAAEPITVK ENSP00000380479/1-359 ITSRILVDQV TGISRGVGFI RFDKRIEAEE AIKGLNGQKP PGATEPITVK ENSBTAP00000055220/1-388 ITSRILVDQV TGISRGVGFI RFDKRIEAEE AIKGLNGQKP PGATEPITVK bmy_10407T0/1-371 ITSRILVDQV TGISRGVGFI RFDKRIEAEE AIKGLNGQKP PGATEPITVK ENSTTRP00000011054/1-386 ITSRILVDQV TGISRGVGFI RFDKRIEAEE AIK-LNGQKP PGATEPITVK 251 300 BACU006630/1-238 FANNPSQKTN QAILSQLYQS PNRRYPGPLA QQAQRFR--- ---------- ENSP00000380479/1-359 FANNPSQKTN QAILSQLYQS PNRRYPGPLA QQAQRFRLDN LLNMAYGVK- ENSBTAP00000055220/1-388 FANNPSQKTN QAILSQLYQS PNRRYPGPLA QQAQRFRLDN LLNMAYGVKS bmy_10407T0/1-371 FANNPSQKTN QAILSQLYQS PNRRYPGPLA QQAQRFRLDN LLNMAYGVKS ENSTTRP00000011054/1-386 FANNPSQKTN QAILSQLYQS PNRRYPGPLA QQAQRFRLDN LLNMAYGVK- 301 350 BACU006630/1-238 ---------- ---------- ---------- ---------- ---------- ENSP00000380479/1-359 RFSPMTIDGM TSLAGINIPG HPGTGWCIFV YNLAPDADES ILWQMFGPFG ENSBTAP00000055220/1-388 RFSPMTIDGM TSLAGINIPG HPGTGWCIFV YNLAPDADES ILWQMFGPFG bmy_10407T0/1-371 RFSPMTIDGM TSLAGINIPG HPGTGWCIFV YNLAPDADES ILWQMFGPFG ENSTTRP00000011054/1-386 RFSPMTIDGM TSLAGINIPG HPGTGWCIFV YNLAPDADES ILWQMFGPFG 351 400 BACU006630/1-238 ---------- ---------- ---------- ---------- ---------- ENSP00000380479/1-359 AVTNVKVIRD FNTNKCKGFG FVTMTNYDEA AMAIASLNGY RLGDRVLQVS ENSBTAP00000055220/1-388 AVTNVKVIRD FNTNKCKGFG FVTMTNYDEA AMAIASLNGY RLGDRVLQV- bmy_10407T0/1-371 AVTNVKVIRD FNTNKCKGFG FVTMTNYDEA AMAIASLNGY RLGDRVLQVS ENSTTRP00000011054/1-386 AVTNVKVIRD FNTNKCKGFG FVTMTNYDEA AMAIASLNGY RLGDRVLQVS 401 450 BACU006630/1-238 --------- ENSP00000380479/1-359 FKTNKTHKA ENSBTAP00000055220/1-388 FKTNKTHKA bmy_10407T0/1-371 FKTNKTHKA ENSTTRP00000011054/1-386 FKTNKTHKA