KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 4 Type: P Thu May 15 18:26:12 2014 Check: 00 .. Name: bmy_14879T0/1-294 Len: 388 Check: 9550 Weight: 1.00 Name: ENSTTRP00000005608/1-387 Len: 388 Check: 1845 Weight: 1.00 Name: BACU016816/1-287 Len: 388 Check: 9869 Weight: 1.00 Name: ENSBTAP00000055251/1-387 Len: 388 Check: 5012 Weight: 1.00 // 1 50 bmy_14879T0/1-294 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000005608/1-387 MEDDAPVIYG LEFQARALTP QTAETDAIRF LVGTQSLKYD NQIHIIDFDD BACU016816/1-287 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000055251/1-387 MEDDAPVIYG LEFQARALTP QTAETDAIRF LVGTQSLKYD NQIHVIDFDD 51 100 bmy_14879T0/1-294 ---------- ---------- --MQGKRGGA PARHQRSS-- ---------- ENSTTRP00000005608/1-387 ENNIINKNVL LHQAGEIWHI SASPADKGVL ATCYNKTADG KVVTCAAVWR BACU016816/1-287 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000055251/1-387 ENNIINKNVL LHQAGEIWHI SASPSDKGVL ATCYNKTADS KVVTCAAVWR 101 150 bmy_14879T0/1-294 PSAAPSPSAR VDPSRRAPHP AEPVHVLREV GGESEGQ--- --WGPPWG-- ENSTTRP00000005608/1-387 MPAELEPGGH ESPEDAAS-P AHALELLCHL GPAAHGSTAC VAWEPAGDGK BACU016816/1-287 MPAELEPGGH ESPEDAAS-P AHALELLCHL GPAAHGSTAC VAWEPAGDGK ENSBTAP00000055251/1-387 MPLELEPGGQ DSPEDAAS-P AHALELLCHL EPAARGSTAC VAWEPAGDGK 151 200 bmy_14879T0/1-294 ---PLSSNYL CFLLPLKTSP NLQLASSASL EGKGQLKFTT GRWSPHHNCT ENSTTRP00000005608/1-387 RVISLADNHI LLWDLQESSS QAVLASSASL EGKGQLKFTT GRWSPHHNCT BACU016816/1-287 RVISLADNHI LLWDLQESSS QAVLASSASL EGKGQLKFTT GRWSPHHNCT ENSBTAP00000055251/1-387 RVISLADNHI LLWDLQESSS QAMLASSASL EGKGQLKFTT GRWSPHHNCS 201 250 bmy_14879T0/1-294 QVATANDTAV RGWDTRTMSQ IYCIESAHGQ LVRDLDFNPN KQYYLASCGD ENSTTRP00000005608/1-387 QVATANDTAV RGWDTRTMSQ IYCIESAHGQ LVRDLDFNPN KQYYLASCGD BACU016816/1-287 QVATANDTAV RGWDTRTMSQ IYCIESAHGQ LVRDLDFNPN KQYYLASCGD ENSBTAP00000055251/1-387 QVATANDTAI RGWDTRTMSQ IYCIESAHGQ LVRDLDFNPN KQYYLASCGD 251 300 bmy_14879T0/1-294 DCRVKFWDTR NVTEPVKTLE EHSHWVWSXR YNHSHDQLVL TGSSDSRVIL ENSTTRP00000005608/1-387 DCRVKFWDTR NVTEPVKTLE EHSHXXXXXX XXXXXXXXXX XXXXXXXXXX BACU016816/1-287 DCRVKFWDTR NVTEPIKTLE EHSHWVWSVR YNHSHDQLVL TGSSDSRVIL ENSBTAP00000055251/1-387 DCKVKFWDTR NVAEPVKTLE EHSHWVWNVR YNHSHDQLVL TGSSDSRVIL 301 350 bmy_14879T0/1-294 SNMVSISSEP FGHLVDDDDL SDQEERRPEE KSQEPPQDSV IATYEEHEDS ENSTTRP00000005608/1-387 XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XSQEPPQDSV IATYEEHEDS BACU016816/1-287 SNMVSISSEP FGHLVDDDDL SDQEERRPEE KSQEPPQDSV IATYEEHEDS ENSBTAP00000055251/1-387 SNMVSISSEP FGHLVDDDDL SDQEERRLEE KSQEPPQDSV IATYEEHEDS 351 400 bmy_14879T0/1-294 VYAADWSSAD PWLFASLSYD GRLVINRVPR ALKYHILL ENSTTRP00000005608/1-387 VYAVDWSSAD PWLFASLSYD GRLVINRVPR ALKYHILL BACU016816/1-287 VYAVDWSSAD PWLFASLSYD GRLVINRVPR ALKYHILL ENSBTAP00000055251/1-387 VYAVDWSSAD PWLFASLSYD GRLVINRVPR ALKYHILL