KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 18:26:13 2014 Check: 00 .. Name: ENSP00000437872/1-838 Len: 857 Check: 7227 Weight: 1.00 Name: ENSBTAP00000055258/1-763 Len: 857 Check: 4667 Weight: 1.00 Name: ENSTTRP00000006671/1-844 Len: 857 Check: 7606 Weight: 1.00 Name: bmy_21333T0/1-856 Len: 857 Check: 628 Weight: 1.00 Name: BACU012826/1-531 Len: 857 Check: 7555 Weight: 1.00 // 1 50 ENSP00000437872/1-838 MTGAEIEPSA QAKPEKKAGE EVIAGPEREN DVPLVVRPKV RTQATTGA-- ENSBTAP00000055258/1-763 MTGAEVEPVA QAKPEKKPGE EVVGGAERET EVPMVVRPKV RNQATSGA-- ENSTTRP00000006671/1-844 MTGAEIEPGV QAKPEKKPGE EVGGGAEREN EVPMVVRPKV RTQATPGA-- bmy_21333T0/1-856 MTGAEIEPGV QAKPEKKPRE EVGGGAEREN EVPMVVRPKV RTQATPGARP BACU012826/1-531 ---------- ---------- ---------- ---------- ---------- 51 100 ENSP00000437872/1-838 ---------- RPKTETKSVP AARPKTEAQA MSGARPKTEV QVMGGARPKT ENSBTAP00000055258/1-763 ---------- RSKTESKATA GARPKTESQT MAGARPRTES QPMAGARPKT ENSTTRP00000006671/1-844 ---------- RPKTESKAMA GARPKTESKA MVGARPKTES QTMAGARPKA bmy_21333T0/1-856 KTESKAMAGS RPKTESKAMA GARPKTESQA MAGARPKAES QTMAGARPKT BACU012826/1-531 ---------- ---------- ---------- ---------- ---------- 101 150 ENSP00000437872/1-838 EAQGITGARP KTDARAVGGA RSKTDAKAIP GARPKDEAQA WAQSEFGTEA ENSBTAP00000055258/1-763 EFQAMPGARP KTEARAVGRA RPKTEAKAIP GARPKDEAQV WAQTEFGAEA ENSTTRP00000006671/1-844 ESQAMAGARL KTEARAVGGA RPKTEAKAIP GARPKDEAQA WAQTEFGAEA bmy_21333T0/1-856 ESQAMAGTRP KTEARAVGGA RPKTEAKAIP GARPKDEAQA WAQTEFGAEA BACU012826/1-531 ---------- ---------- ---------- ---------- ---------- 151 200 ENSP00000437872/1-838 VSQAEGVSQT NAVAWPLATA ESGSVTKSKG LSMDRELVNV DAETFPGTQG ENSBTAP00000055258/1-763 MLQSEGMPQT SVVAWPLVNT ESGSVTKPMA LSVDRELVNV DSETFPSSQV ENSTTRP00000006671/1-844 MSQSEGVSQT NAVTWPLVNT ESGSAAKPMA LSVDRELVNV DTETFPGSQV bmy_21333T0/1-856 MSQAEGVSQT NAVTWPLVNT ESGSAAKPMA LSVDRELVSV DTETFPGSQV BACU012826/1-531 ---------- ---------- ---------- ---------- ---------- 201 250 ENSP00000437872/1-838 QKGIQPWFGP GEETNMGSWC YSRPRAREEA SNESGFWSAD ETSTASSFWT ENSBTAP00000055258/1-763 QTGIQPWFGS GEETSMGSWC YPRAKAREEA SSESGFWSAD ETSTMSSFWA ENSTTRP00000006671/1-844 QTGIQPWFGS GEETNMGSWC YPRSRAREEA SNESGFWSAD ETSTMSSFWA bmy_21333T0/1-856 QTGIQPWFGS GEETNMGSWC YPRSRAREEA SNESGFWSAD ETSTMSSFWA BACU012826/1-531 ---------- ---------- ---------- ---------- ---------- 251 300 ENSP00000437872/1-838 GEETSVRSWP REESNTRSRH RAKHQTNPRS RPRSKQEAYV DSWSGSEDEA ENSBTAP00000055258/1-763 GEEASIRSWP REEANTRSRH RAKHQPNPRS RPRSKQDPFI DSWSGSEEES ENSTTRP00000006671/1-844 GEEASIRSWP REEANTRSRH RAKHQPNPRS RPRSKQEPYI DSWSGSEEES bmy_21333T0/1-856 GEEASIRSWP REEANSRSRH RAKHQPNPRS RPRSKQEPYI DSWSGSEEES BACU012826/1-531 ---------- ---------- ---------- ---------- ---------- 301 350 ENSP00000437872/1-838 SNPFSFWVGE NTNNLFRPRV REEANIRSKL RTNREDCFES ESEDEFYKQS ENSBTAP00000055258/1-763 GNPFCLWAGE NTNNLFRSRV RDEANMRSKL RTKREDFFES ESEDEYYKES ENSTTRP00000006671/1-844 GNPFCLWAGE NTNNLFRPRV RDEANMRSKL RTKREDFFES ESEDEYYKES bmy_21333T0/1-856 GNPFCLWAGE NTNNLFRPRV RDEANMRSKL RTKREDFFES ESEDEYYKES BACU012826/1-531 ---------- ---------- -----MRSKL RTKREDFFES ESEDEYYKES 351 400 ENSP00000437872/1-838 WVLPGEEANS RFRHRDKEDP NTALKLRAQK DV-DSDRVKQ EPRFEEEVII ENSBTAP00000055258/1-763 WFLPEEEANS RFRPRDKEAP NTVLKPRTQK VVNNSDRVKQ ETRFEEEVII ENSTTRP00000006671/1-844 WFLPGEEANS RFRPRDKEES NTVLKPRAQK DVNNSDRVKQ EPRFEEEVII bmy_21333T0/1-856 WFLPGEEANS RFRPRDKEES NTVLKPRAQK DVNNSDRVKQ EPRFEEEVII BACU012826/1-531 WFLPGEEANS RFRPRDKEES NTVLKPRAQK DVNNSDRVKQ EPRFEEEVII 401 450 ENSP00000437872/1-838 GSWFWAEKEA SLEGGASAIC ESEPGTEEGA IGGSAYWAEE KSSLGAVARE ENSBTAP00000055258/1-763 GSWFWAEKEA SMEAGASAIC ESEAGAEEGA IGGSLFWTEE NSSLGAVARE ENSTTRP00000006671/1-844 GSWFWAEKEV SMEAGASAIC ESEPGAEEGA IGGSLFWAEE KSSLGAVARE bmy_21333T0/1-856 GSWFWAEKEV SMEAGASAIC ESEPGAEEGA IGGSLFWAEE KSSLGAVARE BACU012826/1-531 GSWFWAEKEV SMEAGASAIC ESEPGAEEGA IGGSLFWAEE KSSLGAVARE 451 500 ENSP00000437872/1-838 EAKPESEEEA IFGSWFWDRD EACFDLNPCP VYKVSDRFRD AAEE-LNASS ENSBTAP00000055258/1-763 ETRPESEEEA IFGSWFWDRD EACFDLNPRP VYKASPRFRD GAEEEVNVSS ENSTTRP00000006671/1-844 ETRPESEEEA IFGSWFWDRD EACFDLNPHP VYKASPRFRD TAEEGVNVSS bmy_21333T0/1-856 ETRPESEEDA IFGSWFWDRD EACFDLNPHP VYKASPRFRD TAEEEVNVSS BACU012826/1-531 ETRPESEEDA IFGSWFWDRD EACFDLNPHP VYKASPRFRD TAEEEVNVSS 501 550 ENSP00000437872/1-838 RPQTWDEVTV EFKPGLFHGV GFRSTSPFGI PEEA-----S EMLEAKPKNL ENSBTAP00000055258/1-763 RPKTWEEVTV EFKPGPCHGV GFPSPSPFRI PEEATTSVYT ELFEGKPKNV ENSTTRP00000006671/1-844 RPQTWEEVTV EFKPGPCHGI GFPSPSPFRI PEEA-ASVYS EMFEGKPKNV bmy_21333T0/1-856 RPQTWEEVTV EFKPGPCHGI GFPSPSPFRI PEEA-ASVYS EMFEGKPKNV BACU012826/1-531 RPQTWEEVTV EFKPGPCHGI GFPSPSPFRI PEEA-ASVYS EMFEGKPKNM 551 600 ENSP00000437872/1-838 ELSPEGEEQE SLLQPDQPSP EFTFQYDPSY RSVREIREHL RARESAESES ENSBTAP00000055258/1-763 EVTPEGEEQE SLLQSDQPDS EFPFQYDPSY RSVREIREHL RAKESAQPES ENSTTRP00000006671/1-844 EVTPEGEEQE SLLQPDQPDP EFPFQYDPSY RSVREIREHL RTRESAEPES bmy_21333T0/1-856 EVTPEGEEQE SLLQPDQPDP EFPFQYDPSY RSVREIREHL RTRESAEPES BACU012826/1-531 EVTPGGEEQE SLLQPDQPDP EFPFQYDPSY RSVREIREHL RTRESAEPES 601 650 ENSP00000437872/1-838 WSCSCIQCEL KIGSEEFEEF LLLMDKIRDP FIHEISKIAM GMRSASQFTR ENSBTAP00000055258/1-763 WSCSCIQCEL KIGPEEFEEL LLLMDKIRDP FIHEISKIAM GMRTASQFTR ENSTTRP00000006671/1-844 WSCSCIQCEL KIGPEEFEEL LLLMDKIRDP FIHEISKIAM GMRTASQFTR bmy_21333T0/1-856 WSCSCIQCEL KIGPEEFEEL LLLMDKIRDP FIHEISKIAM GMRTASQFTR BACU012826/1-531 WSCSCIQCEL KIGPEEFEEL LLLMDKIRDP FIHEISKIAM GMRTASQFTR 651 700 ENSP00000437872/1-838 DFIRDSGVVS LIETLLNYPS SRVRTSFLEN MIHMAPPYPN LNMIETFICQ ENSBTAP00000055258/1-763 DFIRDSGVVS LIETLLNYPS SRVRTSFLEN MIHMAPPYPN LNMIETFVCQ ENSTTRP00000006671/1-844 DFIRDSGVVS LIETLLNYPS SRVRTSFLEN MIHMAPPYPN LNMIETFICQ bmy_21333T0/1-856 DFIRDSGVVS LIETLLNYPS SRVRTSFLEN MIHVAPPYPN LNMIETFICQ BACU012826/1-531 DFIRDSGVVS LIETLLNYPS SRVRTSFLEN MIHMAPPYPN LNMIETFICQ 701 750 ENSP00000437872/1-838 VCEETLAHSV DSLEQLTGIR MLRHLTMTID YHTLIANYMS GFLSLLTTAN ENSBTAP00000055258/1-763 VCEETLAHSV GSPEQVLGLR MLRHLTSTTD YHTLVSNYMS GFLSLLTTGN ENSTTRP00000006671/1-844 VCEETLAHSV GSPEQLLGLR MLRHLTTTTD YHTLVANYMS GFLSLLTTGN bmy_21333T0/1-856 VCEETLAHSV GSPEQLLGLR MLRHLTTTTD YHTLVANYMS GFLSLLTTGN BACU012826/1-531 VCEETLAHSV GSPEQLLGLR MLRHLTTTTD YHTLVANYMS GFLSLLTTGN 751 800 ENSP00000437872/1-838 ARTKFHVLKM LLNLSENPAV AKKLFSAKAL SIFVGLFNIE ETNDNIQIVI ENSBTAP00000055258/1-763 ARTKFHILKM LLNLSENPMV AKKLF----- ---------- ---------- ENSTTRP00000006671/1-844 ARTKFHVLKM LLNLSENPMV AKKLFSAKAL SIFVGLFNIE ETNDNIQIVI bmy_21333T0/1-856 ARTKFHVLKM LLNLSENPMV AKKLFSAKAL SIFVGLFNIE ETNDNIQIVI BACU012826/1-531 ARTKFHVLKM LLNLSENPMV AKKLFSAKAL SIFVGLFNIE ETNDNIQIVI 801 850 ENSP00000437872/1-838 KMFQNISNII KSGKMSLIDD DFSLEPLISA FREFEELAKQ LQAQIDNQND ENSBTAP00000055258/1-763 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000006671/1-844 KMFQNISSII KNGTMSLIDD DFSLEPLISA FHEFEKLAEE LQVQIDNQND bmy_21333T0/1-856 KMFQNISSII KNGTMSLIDD DFSLEPLISA FHEFEKLAEE LQVQIDNQND BACU012826/1-531 KMFQNISSII KNGTMSLIDD DFSLEPLISA FHEFEKLAEE LQVQIDNQND 851 900 ENSP00000437872/1-838 PEVGQQS ENSBTAP00000055258/1-763 ------- ENSTTRP00000006671/1-844 PEVGQQS bmy_21333T0/1-856 PEVGQQS BACU012826/1-531 PEVGQQS