KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 18:26:22 2014 Check: 00 .. Name: ENSTTRP00000009491/1-455 Len: 478 Check: 9720 Weight: 1.00 Name: ENSP00000242480/1-476 Len: 478 Check: 2772 Weight: 1.00 Name: ENSBTAP00000055288/1-472 Len: 478 Check: 2663 Weight: 1.00 Name: bmy_01403T0/1-472 Len: 478 Check: 4004 Weight: 1.00 Name: BACU003425/1-472 Len: 478 Check: 3560 Weight: 1.00 // 1 50 ENSTTRP00000009491/1-455 MMTAKAVDKI PVTLSGFVHQ LSDNIYPVED LAATSVTIFP NAELGGPFDQ ENSP00000242480/1-476 MMTAKAVDKI PVTLSGFVHQ LSDNIYPVED LAATSVTIFP NAELGGPFDQ ENSBTAP00000055288/1-472 MMTAKAVDKI PVTLSGFVHQ LSDNIYPVED LAPTSVTIFP NAELGGPFDQ bmy_01403T0/1-472 MMTAKAVDKI PVTLSGFVHQ LSDNIYPVED LAATSVTIFP NAELGGPFDQ BACU003425/1-472 MMTAKAVDKI PVTLSGFVHQ LSDNIYPVED LAATSVTIFP NAELGGPFDQ 51 100 ENSTTRP00000009491/1-455 MNGVAGDGMI NIDMTGEKRS LDLPYPSSFA PVSAPRNQTF TYMGKFSIDP ENSP00000242480/1-476 MNGVAGDGMI NIDMTGEKRS LDLPYPSSFA PVSAPRNQTF TYMGKFSIDP ENSBTAP00000055288/1-472 MNGVAGDGMI NIDMTGEKRS LDLPYPSSFA PGSAPRNQTF TYMGKFSIDP bmy_01403T0/1-472 MNGVAGDGMI NIDMTGEKRS LDLPYPSSFA PVSAPRNQTF TYMGKFSIDP BACU003425/1-472 MNGVAGDGMI NIDMTGEKRS LDLPYPSSFA PVSAPRNQTF TYMGKFSIDP 101 150 ENSTTRP00000009491/1-455 QYPGASCYPE GIINIVSAGI LQGVTSPAST TASSSVTSAS PNPLATGPLG ENSP00000242480/1-476 QYPGASCYPE GIINIVSAGI LQGVTSPAST TASSSVTSAS PNPLATGPLG ENSBTAP00000055288/1-472 QYPGAGCYPE GIINIVSAGI LQGVTSPAST TASSSITSAS PNPLATGPLG bmy_01403T0/1-472 QYPGASCYPE GIINIVSAGI LQGVTSPAST TASSSXTSAS PNPLATGPLG BACU003425/1-472 QYPGASCYPE GIINIVSAGI LQGVTSPAST TASSSVTSAS PNPLATGPLG 151 200 ENSTTRP00000009491/1-455 VCAMSQTQPD LDHLYS-PPP PPPYSGCAGD LYQDPSAFLS AATTSTSSSL ENSP00000242480/1-476 VCTMSQTQPD LDHLYSPPPP PPPYSGCAGD LYQDPSAFLS AATTSTSSSL ENSBTAP00000055288/1-472 VCTMSQTQPD LDHLYT-PPP PPPYAGCGGD LYQDPSAFLS AATTSTSSSL bmy_01403T0/1-472 VCTMSQTQPD LDHLYS-PPP PPPYSGCAGD LYQDPSAFLS AATTSTSSPL BACU003425/1-472 VCTMSQTQPD LDHLYS-PPP PPPYSGCAGD LYQDPSAFLS AATTSTSSSL 201 250 ENSTTRP00000009491/1-455 AYPPPPSYPS PKPATDPGLF PMIPDYPGFF PSQCQRDLHG AAGPDRKPFP ENSP00000242480/1-476 AYPPPPSYPS PKPATDPGLF PMIPDYPGFF PSQCQRDLHG TAGPDRKPFP ENSBTAP00000055288/1-472 AYPPPPSYPS PKPATDPSLF PMIPDYPGFF PSQCQRDLHG TAGPDRKPFP bmy_01403T0/1-472 AYPPPPSYPS PKPATDPGLF PMIPDYPGFF PSQCQRDLHG AAGPDRKPFP BACU003425/1-472 AYPPPPSYPS PKPATDPGLF PMIPDYPGFF PSQCQRDLHG AAGPDRKPFP 251 300 ENSTTRP00000009491/1-455 CPLDSLRVPP PLTPLSTIRN FTLGGPSAGA TGPGASGGSE GPRLPGSGS- ENSP00000242480/1-476 CPLDTLRVPP PLTPLSTIRN FTLGGPSAGV TGPGASGGSE GPRLPGSSSA ENSBTAP00000055288/1-472 CPLDSLRVPP PLTPLSTIRN FTLGGPSAGA TGPGAGGGSE GPRLPGTGS- bmy_01403T0/1-472 CPLDSLRVPP PLTPLSTIRN FTLGGPSAGA TGPGASGGSE GPRLPGSGS- BACU003425/1-472 CPLDSLRVPP PLTPLSTIRN FTLGGPSAGA TGPGASGGSE GPRLPGSGS- 301 350 ENSTTRP00000009491/1-455 --AAAAAAAY NPHHLPLRPI LRPRKYPNRP SKTPVHERPY PCPAEGCDRR ENSP00000242480/1-476 AAAAAAAAAY NPHHLPLRPI LRPRKYPNRP SKTPVHERPY PCPAEGCDRR ENSBTAP00000055288/1-472 --AAAAAAAY NPHHLPLRPI LRPRKYPNRP SKTPVHERPY PCPAEGCDRR bmy_01403T0/1-472 --AAAAAAAY NPHHLPLRPI LRPRKYPNRP SKTPVHERPY PCPAEGCDRR BACU003425/1-472 --AAAAAAAY NPHHLPLRPI LRPRKYPNRP SKTPVHERPY PCPAEGCDRR 351 400 ENSTTRP00000009491/1-455 FSRSDELTRH IRIHTGHKPF QCRICMRNFS RSDHLTTHIR THTGEKPFAC ENSP00000242480/1-476 FSRSDELTRH IRIHTGHKPF QCRICMRNFS RSDHLTTHIR THTGEKPFAC ENSBTAP00000055288/1-472 FSRSDELTRH IRIHTGHKPF QCRICMRNFS RSDHLTTHIR THTGEKPFAC bmy_01403T0/1-472 FSRSDELTRH IRIHTGHKPF QCRICMRNFS RSDHLTTHIR THTGEKPFAC BACU003425/1-472 FSRSDELTRH IRIHTGHKPF QCRICMRNFS RSDHLTTHIR THTGEKPFAC 401 450 ENSTTRP00000009491/1-455 DYCGRKQVLN DERK-HTKIL QKMK------ ---SVPLSCA STLCTGQGTL ENSP00000242480/1-476 DYCGRKFARS DERKRHTKIH LRQKERKSSA PSASVPAPST AS-CSG-GVQ ENSBTAP00000055288/1-472 DYCGRKFARS DERKRHTKIH LRQKERKSSA PSSAVPAASS AS-CSG-GAQ bmy_01403T0/1-472 DYCGRKFARS DERKRHTKIH LRQKERKSSA PSSTVPAAST TS-CTG-GAQ BACU003425/1-472 DYCGRKFARS DERKRHTKIH LRQKERKSSA PSSTVPAASG TS-CTG-GAQ 451 500 ENSTTRP00000009491/1-455 RSSSLC---- ----GGSLG- CSSRTRTP ENSP00000242480/1-476 PGGTLCSSNS SSLGGGPLAP CSSRTRTP ENSBTAP00000055288/1-472 AGGTLCSSNS STIGGGSLGP CSSRTRTP bmy_01403T0/1-472 AGGTLCGSNS STIGGGSLGP CSSRTRTP BACU003425/1-472 AGGTLCGSNS STIGGGSLGP CSSRTRTP