KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 4 Type: P Thu May 15 18:26:30 2014 Check: 00 .. Name: bmy_21452T0/1-472 Len: 483 Check: 7227 Weight: 1.00 Name: ENSTTRP00000012799/1-469 Len: 483 Check: 2473 Weight: 1.00 Name: ENSP00000236826/1-467 Len: 483 Check: 7218 Weight: 1.00 Name: ENSBTAP00000055353/1-468 Len: 483 Check: 8415 Weight: 1.00 // 1 50 bmy_21452T0/1-472 -MEMRNLPVL LLLCVAVCSA YPLDRVAKDK DDSMDLVQQY LENYYNLEKD ENSTTRP00000012799/1-469 MFSLKMLPLL LLLHVQLSKA FLVHSEFLEE KTT-KIVQNY LEKFYQLPXX ENSP00000236826/1-467 MFSLKTLPFL LLLHVQISKA FPVSS---KE KNT-KTVQDY LEKFYQLPSN ENSBTAP00000055353/1-468 MFSLKMLPLL LLLHVQLSRA FPVSFASLEE KNR-NIVQNY LEKFYQLPRF 51 100 bmy_21452T0/1-472 VKLFVRRKDS GPVVKKIQEM QRFLGLEVTG KLDSDTLEVI RKPRCGVPDV ENSTTRP00000012799/1-469 XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX ENSP00000236826/1-467 QYQSTRKNGT NVIVEKLKEM QRFFGLNVTG KPNEETLDMM KKPRCGVPDS ENSBTAP00000055353/1-468 KYKSERKSKT NVIVETLKRM QQFFGLNVTG KPNEETLEMM RKPRCGVPDS 101 150 bmy_21452T0/1-472 GHFSTFPGMP KWRKTHLTYR IVNYTLDLPR DAVDSAIEKA LTVWEEVTPF ENSTTRP00000012799/1-469 XXXXXXXXXX XXXXXXXXXX IINYTPDLSE AEVETALEKA FKLWSRVSPL ENSP00000236826/1-467 GGFMLTPGNP KWERTNLTYR IRNYTPQLSE AEVERAIKDA FELWSVASPL ENSBTAP00000055353/1-468 GSFMRTPGNP KWEKTKLTYR IVNYTPNLTE MDVEAIIEEA FKVWSKVSPL 151 200 bmy_21452T0/1-472 TFSRINEGEA DIVIIFAVRE HGDFSRFDGP GNVLAHAYPP GPGIYGDAHF ENSTTRP00000012799/1-469 NFTKTSQEEA DIKIAFLQGD HGDNSPFDGP NGILAHAFQP GPGIGGDVHF ENSP00000236826/1-467 IFTRISQGEA DINIAFYQRD HGDNSPFDGP NGILAHAFQP GQGIGGDAHF ENSBTAP00000055353/1-468 TFNRTLDEEA DIQISFAQRD HGDNSPFDGP DGILAHAFQP GPGIGGDVHF 201 250 bmy_21452T0/1-472 DDDEKWTKDT SGINLFLVAA HELGHSLGLQ HSNNSEALMY PVYKPFADLT ENSTTRP00000012799/1-469 DAEETWTKTS RNYNLFLVAA HEFGHSLGLA HSSDPGALMY PNY-AFSEPS ENSP00000236826/1-467 DAEETWTNTS ANYNLFLVAA HEFGHSLGLA HSSDPGALMY PNY-AFRETS ENSBTAP00000055353/1-468 DAEETWTKTS ENYNLFPVAA HEFGHSLGLA HSSDPGALMY PNY-AFIDPS 251 300 bmy_21452T0/1-472 RFHLSQDDVN GIQSLYGPPT ASPDDSVVPT ESVPPEPGTP ATCDPALSFD ENSTTRP00000012799/1-469 TYSLPQDDIS GIQAIYGPSS NPVQ------ ---PTGPTTP TACDPRLTFD ENSP00000236826/1-467 NYSLPQDDID GIQAIYGLSS NPIQ------ ---PTGPSTP KPCDPSLTFD ENSBTAP00000055353/1-468 SYSLHQDDIN GIQAIYGPSS NPVQ------ ---PTGPTTP TACDPRLTFD 301 350 bmy_21452T0/1-472 AVSTLRGEIL FFKDRHFWRK SFRTLVPEFH LISSFWPSLP LGIDAAYEVI ENSTTRP00000012799/1-469 AITTLRGEIL FFKDKYFWRK HPHLRRVELN FISLFWPSLV NGIQAAYEDF ENSP00000236826/1-467 AITTLRGEIL FFKDRYFWRR HPQLQRVEMN FISLFWPSLP TGIQAAYEDF ENSBTAP00000055353/1-468 AVTTLRGEIL FFKDKYVWRK HPRLRMAEFN FISLYWPSLP NGIHAAYEDF 351 400 bmy_21452T0/1-472 SKDSVFIFKG NQFWAIRGNE VQAGYPRDIH TLGFPSTIRK IDAAFSDKEK ENSTTRP00000012799/1-469 DKDLIFIF-G NQYWAVSGYD IQQGYPKNIA NYGFPSSVQA IDAAVS--YR ENSP00000236826/1-467 DRDLIFLFKG NQYWALSGYD ILQGYPKDIS NYGFPSSVQA IDAAVF--YR ENSBTAP00000055353/1-468 DRDLIFIFKG TQYWALSGYD TQQGYPRHIS SYGFPSSVQA IDAAVS--YR 401 450 bmy_21452T0/1-472 KKTYFFVEDK YWRFDEKRQS MEPGFPKQIV EDFPGVDPEV DAVFEA---- ENSTTRP00000012799/1-469 GKTYFFVNNQ FWRYDDQSQS MEPGYPKSIA SSFQGIESRV DAVFQKNSFF ENSP00000236826/1-467 SKTYFFVNDQ FWRYDNQRQF MEPGYPKSIS GAFPGIESKV DAVFQQEHFF ENSBTAP00000055353/1-468 RKTYFFVNDQ FWSYDDQSQS MEPGYPQSIA SFFPGIESRV DAVFQENSLF 451 500 bmy_21452T0/1-472 --FGKRTLIL LAVGHLKQSI VSEGRGKLK- --- ENSTTRP00000012799/1-469 LFFSGPRYYA FDLSARRITR VERSNRWLNC RSR ENSP00000236826/1-467 HVFSGPRYYA FDLIAQRVTR VARGNKWLNC RYG ENSBTAP00000055353/1-468 LFFSGPRYYA FDFHARRVTR VDRSNTWLNC W--