KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 18:26:36 2014 Check: 00 .. Name: ENSP00000376548/1-443 Len: 480 Check: 1223 Weight: 1.00 Name: ENSBTAP00000055417/1-446 Len: 480 Check: 487 Weight: 1.00 Name: ENSTTRP00000016172/1-447 Len: 480 Check: 308 Weight: 1.00 Name: bmy_17427T0/1-243 Len: 480 Check: 1696 Weight: 1.00 Name: BACU015225/1-315 Len: 480 Check: 4395 Weight: 1.00 // 1 50 ENSP00000376548/1-443 MRNAIIQGLF YGSLTFGIWT ALLFIYLHHN HVSSWQKKSQ EPLSA--WSP ENSBTAP00000055417/1-446 MRNVIIQCLL CASLTFGIWI AVFNIYLHYN HVKK-QEKIQ EKGNPLIWSL ENSTTRP00000016172/1-447 MRNVIIQCLF YGSLILGIWT AIFSIYFHHN PVKNEEKKIQ EKGNPLIWSL bmy_17427T0/1-243 ---------- ---------- ---------- ---------- ---------- BACU015225/1-315 ---------- ---------- ---------- ---------- ---------- 51 100 ENSP00000376548/1-443 GKKVHQQIIY GSEQIPKPH- VIVKRTDEDK AKS-----ML GTDFNHTNPE ENSBTAP00000055417/1-446 GEKLQSK--P DSVHLPRAYN VRVERASEDE PAEPKLLLSS GENFNYSIPE ENSTTRP00000016172/1-447 GKKLQTK--H GSVQIPRPY- VRVNRPNEDE TTEQKSFLKL XXXXXXXXXX bmy_17427T0/1-243 ---------- ---------- ---------- ---------- ---------- BACU015225/1-315 ---------- ---------- ---------- ---------- ---------- 101 150 ENSP00000376548/1-443 LHKELLKYGF NVIISRSLGI EREVPDTRSK MCLQKHYPAR LPTASIVICF ENSBTAP00000055417/1-446 VIHGYSTYGF NSIISKNLGH YRNVPDTRNV MCQKKMY-AK LPTASIIICF ENSTTRP00000016172/1-447 XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XCHKKWYPSN LPTASIVICF bmy_17427T0/1-243 ---------- ---------- ---------- ---------- ---------- BACU015225/1-315 ---------- ---------- ---------- ---------- ---------- 151 200 ENSP00000376548/1-443 YNEECNALFQ TMSSVTNLTP HYFLEEIILV DDMSKVDDLK EKLDYHLETF ENSBTAP00000055417/1-446 TMKN-NALFR TLSSIMTLTQ QYILEEIILV DDMSDFDDLK EKLDYHLEIF ENSTTRP00000016172/1-447 HNEEFNALFR TVSSVMTLTP QHILEEIILV DDMSEFDDLK EKLGYHLEIF bmy_17427T0/1-243 ---------- -----MTLTP QHILEEIILV DDMSEFDDLK EKLDYHVEIF BACU015225/1-315 ---------- -----MTLTP QHILEEIILV DDMSEFDDLK EKLVYHVEIF 201 250 ENSP00000376548/1-443 RGKVKIIRNK KREGLIRARL IGASHASGDV LVFLDSHCEV NRVWLEPLLH ENSBTAP00000055417/1-446 RGKIKLIRNK KREGLIRARM TGASHASGDV LVFLDSHCEV NKVWLEPLLN ENSTTRP00000016172/1-447 RGKIKLIRNK KREGLIRARL IGASRASGDV LVFLDSHCEV NKVWLEPLLN bmy_17427T0/1-243 RGKIKLIRNK KREGLIRARL IGASHASGDV LMLLDSHCKV NKVWLEPLLN BACU015225/1-315 WGKVKLIRNK KREGLIRARL TGASRASGDV LMLLDTHCKV NKVWLEPLLN 251 300 ENSP00000376548/1-443 AIAKDPKMVV CPLIDVIDDR TLEYKPSPLV RGTFDWNLQF KWDNVFSYEM ENSBTAP00000055417/1-446 AIAKDPKMVV CPLIDVIDYM TLEYQPSPIV RGAFNWRLEF KWDHVLSYEI ENSTTRP00000016172/1-447 AIAKDPRMVV CPLIDVIDYV TLEYQPSPVV RGAFNWYLQF KWDHVFSYEM bmy_17427T0/1-243 AIAKDPHMEV CPLIDAIDYV TLEYQPSPVV RGAFNWYLQF KRDRVFSYEM BACU015225/1-315 AIAKDPHMEV CPLIDAIDYV TLEYQPSPVV RGAFNWYLQF KRDHVFSYEM 301 350 ENSP00000376548/1-443 DGPEGSTKPI RSPAMSGGIF AIRRHYFNEI GQYDKDMDFW GRENLELSLR ENSBTAP00000055417/1-446 EGPEGPTTPI RSPAMAGGIF AINRHYFNEI GQYDKGMNLW GGENLELSLR ENSTTRP00000016172/1-447 DGPEGPTRPI RSPAMAGGIF AINRHYFNEI GQYDKGMNLW GGENLELSLR bmy_17427T0/1-243 DGPEGPTRPI QSPAMAGGSC AVNRHYFNAI GKYHKGMNLW GGEHLELSLR BACU015225/1-315 DGPEGPTRPI QSPAMAGGSC AISRHYFNAI GKYHKGMNLW GGEHLELSLR 351 400 ENSP00000376548/1-443 IWMCGGQLFI IPCSRVGHIS KKQTGKPSTI ISAMTHNYLR LVHVWLDEYK ENSBTAP00000055417/1-446 IWMCGGQLYV IPCSRVGHIN RQHVTNRFEI MKVVEYNNLR LVHTWLDEYK ENSTTRP00000016172/1-447 IWMCGGQLFI LPCSRVGHID KQHVANHTGI AKALAYNNLR LVHVWLDEYK bmy_17427T0/1-243 IWMCGGQLFI LPCSRVGHID KQHFANHTGI XKALVYNNLR LAHIWLDEYK BACU015225/1-315 IWMCGGQLFI LPCSRVGHID KQHVANHTGI VKALVYNNLR LVHIWLDEYK 401 450 ENSP00000376548/1-443 EQ-------- ---FFLRKPG LKYVTYGNIR ERVELRKRLG CKSFQWYL-- ENSBTAP00000055417/1-446 GQ-------- ---FFLRRPA LKSAAYGNIS ERVELRKRLG CKSFQWYL-- ENSTTRP00000016172/1-447 EQ-------- ---VFLRRPN LKYLAYGDIS ERVELRKRLG CKSFQWYL-- bmy_17427T0/1-243 VK-------- ---------- ------GTMN ---------- TR-------- BACU015225/1-315 VKGTSLVWKG QRPAFCIDPE AATDHEMDKV LALLIAALVS TKAFGELIAW 451 500 ENSP00000376548/1-443 ---DNVFPEL EASVNSL--- ---------- ENSBTAP00000055417/1-446 ---DTIFPEL EASKAIS--- ---------- ENSTTRP00000016172/1-447 ---DTVFPEL ETSESL---- ---------- bmy_17427T0/1-243 ---------- ---------- ---------- BACU015225/1-315 QESDKMRTDS LRNKQLSPSA LGSVIQSGQH