KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 18:26:38 2014 Check: 00 .. Name: ENSP00000384490/1-412 Len: 461 Check: 2042 Weight: 1.00 Name: BACU013371/1-338 Len: 461 Check: 7731 Weight: 1.00 Name: ENSBTAP00000055457/1-414 Len: 461 Check: 5409 Weight: 1.00 Name: bmy_21230T0/1-460 Len: 461 Check: 5705 Weight: 1.00 Name: ENSTTRP00000008922/1-416 Len: 461 Check: 7353 Weight: 1.00 // 1 50 ENSP00000384490/1-412 ---------- ---------- ---------- ---------- -----MELSA BACU013371/1-338 ---------- ---------- ---------- ---------- -----MELSA ENSBTAP00000055457/1-414 ---------- ---------- ---------- ---------- -----MELSA bmy_21230T0/1-460 PQLERERAPR RAPARRAWAL WRVRERCSTG RGSREYYGLW VPLSKMELSA ENSTTRP00000008922/1-416 ---------- ---------- ---------- ---------- -----MELSA 51 100 ENSP00000384490/1-412 VGERVFAAES IIKRRIRKGR IEYLVKWKGW AIKYSTWEPE ENILDSRLIA BACU013371/1-338 VGERVFAAES IIKRRIRKGR IEYLVKWKGW AIKYSTWEPE ENILDSRLIA ENSBTAP00000055457/1-414 VGERVFAAES IIKRRIRKGR IEYLVKWKGW AIKYSTWEPE ENILDSRLIA bmy_21230T0/1-460 VGERVFAAES IIKRRIRKGR IEYLVKWKGW AIKYSTWEPE ENILDSRLIA ENSTTRP00000008922/1-416 VGERVFAAES IIKRRIRKGR IEYLVKWKGW AIKYSTWEPE ENILDSRLIA 101 150 ENSP00000384490/1-412 AFEQKERERE LYGPKKRGPK PKTFLLKARA QAEALRISDV HFSVKPSASA BACU013371/1-338 AFEQKERERE LYGPKKRGPK PKTFLLKARA QAEALRISDV HFSVKPTASA ENSBTAP00000055457/1-414 AFEQKERERE LYGPKKRGPK PKTFLLKARA QAEALRISDV HFSVKPSASA bmy_21230T0/1-460 AFEQKERERE LYGPKKRGPK PKTFLLKARA QAEALRISDV HFSVKPTASA ENSTTRP00000008922/1-416 AFEQKERERE LYGPKKRGPK PKTFLLKARA QAEALRISDV HFSVKPTASA 151 200 ENSP00000384490/1-412 SSPKLHSSAA VHRLKKDIRR CHRMSRRPLP RPDPQGGSPG LRPPISPFSE BACU013371/1-338 SSPKLHSSAA VHRLKKDIRR CHRMSRRPLP RPDPQGGSPG LRPPISPFSE ENSBTAP00000055457/1-414 SSPKLHSSAA VHRLKKDIRR CHRMSRRPLP RPDPQGGSPG LRPPISPFSE bmy_21230T0/1-460 SSPKLHSSAA VHRLKKDIRR CHRMSRRPLP RPDPQGGSPG LRPPISPFSE ENSTTRP00000008922/1-416 SSPKLHSSAA VHRLKKDIRR CHRMSRRPLP RPDPQGGSPG LRPPISPFSE 201 250 ENSP00000384490/1-412 TVRIINRKVK PREPKRNRII LNLKVIDKGA GGGGAGQGAG ALARPKVPSR BACU013371/1-338 TVRIINRKVK PREPKRNRII LNLKVIDKGT GGGGAGQGAG ALARPKVPSR ENSBTAP00000055457/1-414 TVRIINRKVK PREPKRNRII LNLKVIDKGP GPGGAGQGAG ALARPKVPSR bmy_21230T0/1-460 TVRIINRKVK PREPKRNRII LNLKVIDKGT GGGGAGQGAG ALARPKVPSR ENSTTRP00000008922/1-416 TVRIINRKVK PREPKRNRII LNLKVIDKGT GGGGAGQGAG ALARPKVPSR 251 300 ENSP00000384490/1-412 NRVIGKSKKF SESVLRTQIR HMKFGAFALY -KPPPAPLVA PSPGKAE-AS BACU013371/1-338 NRVIGKSKKF SESILRTQIR HMKFGAFAMY NKPPPGPLPP PPATKADIAA ENSBTAP00000055457/1-414 NRVIGKSKKF SESILRTQVR HMKFGTFALY NKPPPGPLQP PPAGKTDITA bmy_21230T0/1-460 NRVIGKSKKF SESILRTQIR HMKFGAFAMY NKPPPGPLPP PPATKADIAA ENSTTRP00000008922/1-416 NRVIGKSKKF SESILRTQIR HMKFGAFAMY NKPPPGPLPP PPATKADIAA 301 350 ENSP00000384490/1-412 APGPGLLLAA PAAPYDARSS GSSGCPSPTP Q-SSDPDDTP PKLLPETVSP BACU013371/1-338 SPGQGLLLAA PSAPYDARSS SSSGCPSPTP QSSSDPDDAP PKLLPETT-- ENSBTAP00000055457/1-414 SPGQGLLLAP PSAPYDERSS SSSDCPSPVP H-SSEPEDAP PKLLPETTSP bmy_21230T0/1-460 SPGQGLLLAA PSAPYDARSS SSSGCPSPTP QSSSDPDDAP PKLLPETTSP ENSTTRP00000008922/1-416 SPGQGLLLAA PSAPYDARSS SSSGCPSPTP QSSSDPDDAP PKLLPETTSP 351 400 ENSP00000384490/1-412 SAPSWREPEV LDLSLPPESA ATSKRAPPEV TAAAGPAPPT APEPAGASSE BACU013371/1-338 ----W----- ---------- ---------- ---------- ---PGAAPGS ENSBTAP00000055457/1-414 SAPDWREPEV LDLSLPPEAA ATNKRAPPEV PAAASQALPT VPEPAGAASE bmy_21230T0/1-460 SAPDWREPEV LDLSIPPEAA ATSKRAPPDV TAAASQALPA APQPAGAASE ENSTTRP00000008922/1-416 SAPDWREPEV LDLSIPPEAA ATSKRAPPDV TAASNQALPA APQPAGAASE 401 450 ENSP00000384490/1-412 PEAGDWRPEM SPCSNVVVTD VTSNLLTVTI KEFCNPEDFE K-VAAGVAGA BACU013371/1-338 PQCPVRRPQL ---------- ---QLLRLP- --FADPAVLL R------PG- ENSBTAP00000055457/1-414 PEAGDWRPEM SPCSNVVVTD VTSNLLTVTI KEFCNPEDFE K-VAAGVAGA bmy_21230T0/1-460 PEAGDWRPEM SPCSNVVVTD VTSNLLTVTI KEFCNPEDFE K-VAAGVAGA ENSTTRP00000008922/1-416 PEAGDWRPEM SPCSNVVVTD VTSNLLTVTI KEFCNPEDFE KCCAAGVAGA 451 500 ENSP00000384490/1-412 AGGGGSIGAS K BACU013371/1-338 ---------- - ENSBTAP00000055457/1-414 AAGGGSSGAS K bmy_21230T0/1-460 AAGGGSSGQS K ENSTTRP00000008922/1-416 AVGGGSSGQS K