KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 4 Type: P Thu May 15 18:26:41 2014 Check: 00 .. Name: bmy_16677T0/1-380 Len: 390 Check: 2771 Weight: 1.00 Name: ENSTTRP00000000173/1-304 Len: 390 Check: 7289 Weight: 1.00 Name: ENSP00000379051/1-312 Len: 390 Check: 8164 Weight: 1.00 Name: ENSBTAP00000055488/1-304 Len: 390 Check: 6395 Weight: 1.00 // 1 50 bmy_16677T0/1-380 MAVVQLHGKT TNCCVGASTL LSNKRASRRK TEVLLGFVFT FSQLSTGSLQ ENSTTRP00000000173/1-304 ----MADGDS GSERGGGG-- ---------- ---------- ----GPGGFQ ENSP00000379051/1-312 ----MADGDS GSERGGGG-- ---------- ---------- ----GPCGFQ ENSBTAP00000055488/1-304 ----MADGDS GSERGGG--- ---------- ---------- ----GPGGFQ 51 100 bmy_16677T0/1-380 NVEPEGNVHR KLSHTRELHP RGNAVWGSRV PPAPTERSAP ISQLGNRSEA ENSTTRP00000000173/1-304 PASRGGGEQ- ---ETQELAS KRLDIQNKRF ---------- ---------- ENSP00000379051/1-312 PASRGGGEQ- ---ETQELAS KRLDIQNKRF ---------- ---------- ENSBTAP00000055488/1-304 PASRGGGEQ- ---ETQELAS KRLDIQNKRF ---------- ---------- 101 150 bmy_16677T0/1-380 VEAWNVPRNT YPFQGIGGHV GGGECGPPGS CCQVHAVCWR LPNLHLRCSP ENSTTRP00000000173/1-304 --YLDVKQKA K-----GRFL KIAEVGAERS KSRL------ --TLSMAVAA ENSP00000379051/1-312 --YLDVKQNA K-----GRFL KIAEVGAGGS KSRL------ --TLSMAVAA ENSBTAP00000055488/1-304 --YLDVKQNA K-----GRFL KIAEVGAGGS KSRL------ --TLSMAVAA 151 200 bmy_16677T0/1-380 SSRLHFSG-S HSCLDTPPPA PSWLLKLNMP VAAAAGAEEG GGPRRALKSE ENSTTRP00000000173/1-304 EVRDYLGD-I EHYVQLGPSS PE-------Q VAAAAGAEEG GGPRRALKSE ENSP00000379051/1-312 EFRDSLGDFI EHYAQLGPSS PE-------Q LAA--GAEEG GGPRRALKSE ENSBTAP00000055488/1-304 EFRDYLGDFI EHYAQLGPSS PE-------Q VAAAAGAEEG GGPRRALKSE 201 250 bmy_16677T0/1-380 FLVRENRKYY LDLKENQRGR FLRIRQTVNR GGG----GPG PGGLQSGQTI ENSTTRP00000000173/1-304 FLVRENRKYY LDLKENQRGR FLRIRQTVNR GGG----GPG PGGLQSGQTI ENSP00000379051/1-312 FLVRENRKYY LDLKENQRGR FLRIRQTVNR GGGGFGAGPG PGGLQSGQTI ENSBTAP00000055488/1-304 FLVRENRKYY LDLKENQRGR FLRIRQTVNR GGG----GPG PGGLQSGQTI 251 300 bmy_16677T0/1-380 ALPAQGLIEF RDALAKLIDD YGGEDDELAG GPGGGAGGPG GGLYGELPEG ENSTTRP00000000173/1-304 ALPAQGLIEF RDALAKLIDD YGGEDDELAG GPGGGAGGPG GGLYGELPEG ENSP00000379051/1-312 ALPAQGLIEF RDALAKLIDD YGGEDDELAG GPGGGAGGPG GGLYGELPEG ENSBTAP00000055488/1-304 ALPAQGLIEF RDALAKLIDD YGGEDDELAG GPGGGAGGPG GGLYGELPEG 301 350 bmy_16677T0/1-380 TSITVDSKRF FFDVGCNKYG VFLRVSEVKP SYRNAITVPF KAWGKFGGAF ENSTTRP00000000173/1-304 TSITVDSKRF FFDVGCNKYG VFLRVSEVKP SYRNAITVPF KAWGKFGGAF ENSP00000379051/1-312 TSITVDSKRF FFDVGCNKYG VFLRVSEVKP SYRNAITVPF KAWGKFGGAF ENSBTAP00000055488/1-304 TSITVDSKRF FFDVGCNKYG VFLRVSEVKP SYRNAITVPF KAWGKFGGAF 351 400 bmy_16677T0/1-380 CRYADEMKEI QERQRDKLYE RR-----GGD ESEGEEVDED ENSTTRP00000000173/1-304 CRYADEMKEI QERQRDKLYE RR-----GGD ESEGEEVDED ENSP00000379051/1-312 CRYADEMKEI QERQRDKLYE RRGGGSGGGE ESEGEEVDED ENSBTAP00000055488/1-304 CRYADEMKEI QERQRDKLYE RR-----GGD ESEGEEVDED